Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion, plastid, nucleus, cytosol
Predictor Summary:
Predictor Summary:
- plastid 2
- cytosol 2
- mitochondrion 3
- nucleus 2
PPI
No PPI Data
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
VIT_04s0023g02620.t01 | Wine grape | nucleus | 95.65 | 95.65 |
GSMUA_Achr9P10780_001 | Banana | cytosol | 95.65 | 95.65 |
KRH76710 | Soybean | nucleus | 93.17 | 93.17 |
KRH28745 | Soybean | nucleus | 93.17 | 93.17 |
GSMUA_Achr6P29810_001 | Banana | cytosol | 93.17 | 93.17 |
Os03t0681400-01 | Rice | cytosol | 91.93 | 91.93 |
VIT_18s0001g13180.t01 | Wine grape | cytosol | 91.93 | 91.93 |
GSMUA_Achr9P25520_001 | Banana | cytosol, mitochondrion, nucleus, plastid | 91.93 | 91.93 |
Solyc02g084760.2.1 | Tomato | plastid | 91.3 | 91.3 |
PGSC0003DMT400009304 | Potato | nucleus | 90.68 | 90.68 |
EES17494 | Sorghum | cytosol | 90.68 | 90.68 |
Solyc04g080810.2.1 | Tomato | mitochondrion, nucleus | 90.68 | 90.68 |
TraesCS5A01G006200.1 | Wheat | cytosol | 90.68 | 90.68 |
TraesCS5B01G005100.1 | Wheat | cytosol | 90.68 | 90.68 |
TraesCS5D01G006000.1 | Wheat | cytosol | 90.68 | 90.68 |
PGSC0003DMT400009620 | Potato | nucleus | 90.06 | 90.06 |
Zm00001d041216_P001 | Maize | extracellular | 90.06 | 90.06 |
Os12t0636800-01 | Rice | cytosol | 89.44 | 89.44 |
Zm00001d033374_P001 | Maize | endoplasmic reticulum, extracellular, nucleus, plastid | 27.33 | 86.27 |
EER91078 | Sorghum | cytosol, plastid | 87.58 | 85.45 |
TraesCS4A01G288800.1 | Wheat | cytosol | 65.84 | 84.13 |
HORVU4Hr1G003890.1 | Barley | cytosol, mitochondrion | 83.85 | 82.82 |
TraesCS4D01G023400.1 | Wheat | cytosol, mitochondrion | 83.85 | 82.82 |
HORVU0Hr1G000080.1 | Barley | extracellular | 37.89 | 81.33 |
CDX75572 | Canola | nucleus | 80.75 | 80.75 |
Bra011680.1-P | Field mustard | nucleus | 80.75 | 80.75 |
CDX69222 | Canola | nucleus | 80.12 | 80.12 |
AT4G36410.1 | Thale cress | nucleus | 78.88 | 78.88 |
CDY64924 | Canola | cytosol | 78.88 | 78.88 |
Bra017759.1-P | Field mustard | cytosol | 78.88 | 78.88 |
TraesCS4B01G026000.2 | Wheat | cytosol | 83.85 | 77.14 |
CDY59697 | Canola | nucleus | 77.02 | 77.02 |
Zm00001d031205_P004 | Maize | cytosol | 75.16 | 70.76 |
Zm00001d013546_P003 | Maize | mitochondrion, plastid | 85.71 | 65.71 |
Protein Annotations
Gene3D:3.10.110.10 | MapMan:35.1 | GO:GO:0000166 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005488 |
GO:GO:0005524 | GO:GO:0008150 | GO:GO:0009719 | GO:GO:0009739 | GO:GO:0016740 | EnsemblPlantsGene:GSMUA_Achr4G20980_001 |
EnsemblPlants:GSMUA_Achr4P20980_001 | EnsemblPlants:GSMUA_Achr4T20980_001 | InterPro:IPR000608 | InterPro:IPR016135 | UniProt:M0SQR1 | PFAM:PF00179 |
ScanProsite:PS00183 | PFscan:PS50127 | PANTHER:PTHR44452 | PANTHER:PTHR44452:SF1 | SMART:SM00212 | SUPFAM:SSF54495 |
InterPro:UBQ-conjugat_E2 | InterPro:UBQ-conjugating_AS | InterPro:UBQ-conjugating_enzyme/RWD | UniParc:UPI000294CFD0 | SEG:seg | : |
Description
Probable ubiquitin-conjugating enzyme E2 16 [Source:GMGC_GENE;Acc:GSMUA_Achr4G20980_001]
Coordinates
chr4:-:21530259..21535327
Molecular Weight (calculated)
18404.9 Da
IEP (calculated)
8.624
GRAVY (calculated)
-0.461
Length
161 amino acids
Sequence
(BLAST)
(BLAST)
001: MTSSSAASRK ALSKIACNRL QKELVEWQVN PPAGFKHKVT DNLQRWVIEV IGAPGTLYAN EKYQLQVDFP EHYPMEAPQV IFLHPAPLHP HIYSNGHICL
101: DILYDSWSPA MTVSSVCISI LSMLSSSTAK QRPPDNDRYV RNCRNGRSPK ETRWWFHDDK V
101: DILYDSWSPA MTVSSVCISI LSMLSSSTAK QRPPDNDRYV RNCRNGRSPK ETRWWFHDDK V
001: MSSSGAPSRK TLSKIATNRL QKELVEWQMN PPTGFKHKVT DNLQRWIIEV IGAPGTLYAN DTYQLQVDFP EHYPMESPQV IFLHPAPLHP HIYSNGHICL
101: DILYDSWSPA MTVSSICISI LSMLSSSTEK QRPTDNDRYV KNCKNGRSPK ETRWWFHDDK V
101: DILYDSWSPA MTVSSICISI LSMLSSSTEK QRPTDNDRYV KNCKNGRSPK ETRWWFHDDK V
Arabidopsis Description
UBC16Probable ubiquitin-conjugating enzyme E2 16 [Source:UniProtKB/Swiss-Prot;Acc:Q9FWT2]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.