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Banana
Subcellular Localization
min:
: max

 
Winner_takes_all: mitochondrion, plastid, nucleus, cytosol

Predictor Summary:
  • plastid 2
  • cytosol 2
  • mitochondrion 3
  • nucleus 2
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
VIT_04s0023g02620.t01 Wine grape nucleus 95.65 95.65
GSMUA_Achr9P10780_001 Banana cytosol 95.65 95.65
KRH76710 Soybean nucleus 93.17 93.17
KRH28745 Soybean nucleus 93.17 93.17
GSMUA_Achr6P29810_001 Banana cytosol 93.17 93.17
Os03t0681400-01 Rice cytosol 91.93 91.93
VIT_18s0001g13180.t01 Wine grape cytosol 91.93 91.93
GSMUA_Achr9P25520_001 Banana cytosol, mitochondrion, nucleus, plastid 91.93 91.93
Solyc02g084760.2.1 Tomato plastid 91.3 91.3
PGSC0003DMT400009304 Potato nucleus 90.68 90.68
EES17494 Sorghum cytosol 90.68 90.68
Solyc04g080810.2.1 Tomato mitochondrion, nucleus 90.68 90.68
TraesCS5A01G006200.1 Wheat cytosol 90.68 90.68
TraesCS5B01G005100.1 Wheat cytosol 90.68 90.68
TraesCS5D01G006000.1 Wheat cytosol 90.68 90.68
PGSC0003DMT400009620 Potato nucleus 90.06 90.06
Zm00001d041216_P001 Maize extracellular 90.06 90.06
Os12t0636800-01 Rice cytosol 89.44 89.44
Zm00001d033374_P001 Maize endoplasmic reticulum, extracellular, nucleus, plastid 27.33 86.27
EER91078 Sorghum cytosol, plastid 87.58 85.45
TraesCS4A01G288800.1 Wheat cytosol 65.84 84.13
HORVU4Hr1G003890.1 Barley cytosol, mitochondrion 83.85 82.82
TraesCS4D01G023400.1 Wheat cytosol, mitochondrion 83.85 82.82
HORVU0Hr1G000080.1 Barley extracellular 37.89 81.33
CDX75572 Canola nucleus 80.75 80.75
Bra011680.1-P Field mustard nucleus 80.75 80.75
CDX69222 Canola nucleus 80.12 80.12
AT4G36410.1 Thale cress nucleus 78.88 78.88
CDY64924 Canola cytosol 78.88 78.88
Bra017759.1-P Field mustard cytosol 78.88 78.88
TraesCS4B01G026000.2 Wheat cytosol 83.85 77.14
CDY59697 Canola nucleus 77.02 77.02
Zm00001d031205_P004 Maize cytosol 75.16 70.76
Zm00001d013546_P003 Maize mitochondrion, plastid 85.71 65.71
Protein Annotations
Gene3D:3.10.110.10MapMan:35.1GO:GO:0000166GO:GO:0003674GO:GO:0003824GO:GO:0005488
GO:GO:0005524GO:GO:0008150GO:GO:0009719GO:GO:0009739GO:GO:0016740EnsemblPlantsGene:GSMUA_Achr4G20980_001
EnsemblPlants:GSMUA_Achr4P20980_001EnsemblPlants:GSMUA_Achr4T20980_001InterPro:IPR000608InterPro:IPR016135UniProt:M0SQR1PFAM:PF00179
ScanProsite:PS00183PFscan:PS50127PANTHER:PTHR44452PANTHER:PTHR44452:SF1SMART:SM00212SUPFAM:SSF54495
InterPro:UBQ-conjugat_E2InterPro:UBQ-conjugating_ASInterPro:UBQ-conjugating_enzyme/RWDUniParc:UPI000294CFD0SEG:seg:
Description
Probable ubiquitin-conjugating enzyme E2 16 [Source:GMGC_GENE;Acc:GSMUA_Achr4G20980_001]
Coordinates
chr4:-:21530259..21535327
Molecular Weight (calculated)
18404.9 Da
IEP (calculated)
8.624
GRAVY (calculated)
-0.461
Length
161 amino acids
Sequence
(BLAST)
001: MTSSSAASRK ALSKIACNRL QKELVEWQVN PPAGFKHKVT DNLQRWVIEV IGAPGTLYAN EKYQLQVDFP EHYPMEAPQV IFLHPAPLHP HIYSNGHICL
101: DILYDSWSPA MTVSSVCISI LSMLSSSTAK QRPPDNDRYV RNCRNGRSPK ETRWWFHDDK V
Best Arabidopsis Sequence Match ( AT1G75440.1 )
(BLAST)
001: MSSSGAPSRK TLSKIATNRL QKELVEWQMN PPTGFKHKVT DNLQRWIIEV IGAPGTLYAN DTYQLQVDFP EHYPMESPQV IFLHPAPLHP HIYSNGHICL
101: DILYDSWSPA MTVSSICISI LSMLSSSTEK QRPTDNDRYV KNCKNGRSPK ETRWWFHDDK V
Arabidopsis Description
UBC16Probable ubiquitin-conjugating enzyme E2 16 [Source:UniProtKB/Swiss-Prot;Acc:Q9FWT2]
SUBAcon: [nucleus]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.