CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	cytosol, nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH10721	Soybean	nucleus	95.02	95.02
PGSC0003DMT400017149	Potato	cytosol	28.57	72.27
GSMUA_Achr5P21640_001	Banana	cytosol	23.59	69.61
VIT_01s0150g00100.t01	Wine grape	cytosol	70.43	69.51
Os08t0537800-01	Rice	cytosol	49.83	69.44
CDX90125	Canola	cytosol	66.11	66.56
Solyc04g045480.2.1	Tomato	cytosol	66.45	66.45
AT1G28120.1	Thale cress	cytosol	67.44	66.34
CDY11749	Canola	cytosol	66.11	66.33
GSMUA_Achr5P21620_001	Banana	cytosol	38.54	64.44
CDY66647	Canola	cytosol	60.13	64.41
Bra030073.1-P	Field mustard	extracellular	41.2	62.0
CDY15693	Canola	cytosol	40.2	60.5
Bra010902.1-P	Field mustard	cytosol	62.46	59.31
Zm00001d049873_P001	Maize	cytosol, extracellular	60.47	57.23
TraesCS7A01G263900.1	Wheat	cytosol	60.13	56.74
HORVU7Hr1G055280.2	Barley	cytosol	59.8	56.43
TraesCS7B01G161900.2	Wheat	cytosol	59.8	56.43
TraesCS7D01G264800.1	Wheat	cytosol	59.8	56.43
EES15282	Sorghum	cytosol	59.47	55.25
GSMUA_AchrUn_...	Banana	cytosol	45.18	54.18
PGSC0003DMT400017147	Potato	cytosol	30.56	53.8
Zm00001d031668_P001	Maize	cytosol	15.95	42.48
GSMUA_Achr11P...	Banana	cytosol	45.18	41.98

Protein Annotations

Gene3D:1.20.1300.20	MapMan:19.2.3.1.2.1	MapMan:19.2.4.3.3	Gene3D:3.30.200.60	EMBL:ACUP02008360	EnsemblPlantsGene:GLYMA_13G248100
GO:GO:0003674	GO:GO:0003824	GO:GO:0004843	GO:GO:0005488	GO:GO:0005515	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006464	GO:GO:0006508	GO:GO:0008150
GO:GO:0008152	GO:GO:0008233	GO:GO:0008234	GO:GO:0009987	GO:GO:0016579	GO:GO:0016787
GO:GO:0019538	GO:GO:0019784	GO:GO:0036459	GO:GO:0043130	GO:GO:0071108	UniProt:I1M2E2
InterPro:IPR003323	EnsemblPlants:KRH21599	ProteinID:KRH21599	ProteinID:KRH21599.1	ProteinID:KRH21600.1	InterPro:OTU_dom
InterPro:Otubain	PFAM:PF10275	PIRSF:PIRSF013503	PFscan:PS50802	PANTHER:PTHR12931	InterPro:Papain_like_cys_pep_sf
InterPro:Peptidase_C65_otubain	SUPFAM:SSF54001	UniParc:UPI000233B232	:	:	:

Description

hypothetical protein

Coordinates

chr13:+:35631138..35635086

Molecular Weight (calculated)

33864.9 Da

IEP (calculated)

4.533

GRAVY (calculated)

-0.262

Length

301 amino acids

Sequence
(BLAST)

001: MQSKEAVVED GEIKSVTAVG SEIDGWTNFG DDDIMQQQYT IQSEEAKKVP FVGDKEPLSS LAAEYKSGSP ILLEKIKVLD EQYAAIRRTR GDGNCFFRSF
101: MFSYLEHVMK CQDQAEVDRI QANVEKSRKA LQTLGYADLT FEDFFALFLE QLESVIQGKE TSISHEELVL RSRDQSVSDY VVMFFRFVTS AAIQKRTEFF
201: EPFILGLTNT TVEQFCKSSV EPMGEESDHV HITALSDALG IPVRVVYLDR SSSDTGGVSV NHHDFMPVAG DLPNASCSSE KNIPFITLLY RPGHYDILYP
301: K

Best Arabidopsis Sequence Match ( AT1G28120.1 )
(BLAST)

001: MQNQIDMVKD EAEVAASISA IKGEEWGNCS SVEDQPSFQE EEAAKVPYVG DKEPLSSLAA EYQSGSPILL EKIKILDSQY IGIRRTRGDG NCFFRSFMFS
101: YLEHILESQD RAEVDRIKVN VEKCRKTLQN LGYTDFTFED FFALFLEQLD DILQGTEESI SYDELVNRSR DQSVSDYIVM FFRFVTAGDI RTRADFFEPF
201: ITGLSNATVD QFCKSSVEPM GEESDHIHIT ALSDALGVAI RVVYLDRSSC DSGGVTVNHH DFVPVGITNE KDEEASAPFI TLLYRPGHYD ILYPKPSCKV
301: SDNVGK

Arabidopsis Description

Ubiquitin thioesterase [Source:UniProtKB/TrEMBL;Acc:K9M9G0]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.