CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
OQU78677	Sorghum	cytosol	44.49	71.15
KXG22925	Sorghum	nucleus	49.5	53.93
Zm00001d023339_P001	Maize	plastid	50.9	52.59
EES15642	Sorghum	mitochondrion, nucleus	50.3	50.71
TraesCS2B01G089100.1	Wheat	nucleus	26.45	43.85
TraesCS2D01G073000.2	Wheat	mitochondrion	34.27	41.81
TraesCS2A01G074100.1	Wheat	mitochondrion	33.47	41.23
TraesCS2D01G056000.1	Wheat	cytosol	36.67	41.03
HORVU2Hr1G009710.27	Barley	cytosol	34.27	40.91
TraesCS2A01G057400.1	Wheat	cytosol	27.05	39.47
TraesCS2B01G073500.1	Wheat	cytosol	36.87	38.49
TraesCS2D01G056200.1	Wheat	cytosol	36.07	38.14
TraesCS2B01G089800.1	Wheat	nucleus	31.26	37.05
TraesCS2B01G078500.1	Wheat	nucleus	29.86	36.79
TraesCS2D01G073100.1	Wheat	nucleus	29.66	36.63
TraesCS2B01G089000.1	Wheat	cytosol	31.66	35.35
TraesCS2B01G089600.1	Wheat	nucleus	28.26	34.99
TraesCS2D01G072900.1	Wheat	cytosol, mitochondrion, nucleus	30.66	34.54
TraesCS2A01G074500.1	Wheat	nucleus	26.85	34.18
TraesCS2A01G074000.1	Wheat	cytosol	29.86	34.02
HORVU2Hr1G012520.2	Barley	cytosol, nucleus	28.26	32.64
HORVU2Hr1G012540.44	Barley	cytosol	25.25	29.93
EES15282	Sorghum	cytosol	16.23	25.0
Os04t0652600-01	Rice	nucleus	19.64	17.88

Protein Annotations

EnsemblPlants:KXG22929	EnsemblPlantsGene:SORBI_3008G029800	Gene3D:1.20.1300.20	Gene3D:3.30.200.60	InterPro:Papain_like_cys_pep_sf	InterPro:Peptidase_C65_otubain
PANTHER:PTHR12931	PANTHER:PTHR12931:SF18	PFAM:PF10275	ProteinID:KXG22929	ProteinID:KXG22929.1	SEG:seg
SUPFAM:SSF54001	UniParc:UPI00081AD8E7	UniProt:A0A1B6PB10	MapMan:35.1	:	:

Description

hypothetical protein

Coordinates

chr8:+:2646847..2653534

Molecular Weight (calculated)

54389.0 Da

IEP (calculated)

8.434

GRAVY (calculated)

-0.477

Length

499 amino acids

Sequence
(BLAST)

001: MAEKAPPKKR RFREFTSHPS AGRSAGGDGG DGDGDRAAAP ASAPQKEPPS SPPRSPSPPE PFTYNDPDAG SSGGGGAAAA APGPAPQWKP SSSFPRSPSP
101: PKPLTYNPGA GSSGGGGGGG AAGPKLSYLD TKDSDVEKPD EFKTENGWGS LFMSDPEVLS KDSSNPQNLP HYIGRQDCEP LSTQEFFSLR HNWQQLLDGK
201: KTYLRRAAES NYADCVFVTP ESLDEALGCQ EPLSHLVRGA AGKPNRQQKF KILSEHYVCF RPVRSDGSQF YRAFLFSYLE NLGKMQGSQA EVTRLMECVA
301: RSRVNFLRLK WNNAYFSNPE AFFSSVVSEF EHLVNSVANG LNAVELYKIS LEEISSSRIL SLLRLLTEVH IRTYEANYNR EVVSQNQNEK INALLFCKES
401: VRPFDADVSL LQMKALSQAL GIPLHLAAVD GVKIGGTVQV KCIDIIPRSG PLSSTRRYYL SSTIDKQSFL PPGNLFSSDR MTLVTILITP NATAILYRK

Best Arabidopsis Sequence Match ( AT1G28120.1 )
(BLAST)

001: MQNQIDMVKD EAEVAASISA IKGEEWGNCS SVEDQPSFQE EEAAKVPYVG DKEPLSSLAA EYQSGSPILL EKIKILDSQY IGIRRTRGDG NCFFRSFMFS
101: YLEHILESQD RAEVDRIKVN VEKCRKTLQN LGYTDFTFED FFALFLEQLD DILQGTEESI SYDELVNRSR DQSVSDYIVM FFRFVTAGDI RTRADFFEPF
201: ITGLSNATVD QFCKSSVEPM GEESDHIHIT ALSDALGVAI RVVYLDRSSC DSGGVTVNHH DFVPVGITNE KDEEASAPFI TLLYRPGHYD ILYPKPSCKV
301: SDNVGK

Arabidopsis Description

Ubiquitin thioesterase [Source:UniProtKB/TrEMBL;Acc:K9M9G0]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.