Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| HORVU2Hr1G009710.27 | Barley | cytosol | 76.23 | 81.34 |
| TraesCS2D01G056200.1 | Wheat | cytosol | 84.75 | 80.08 |
| TraesCS2A01G057400.1 | Wheat | cytosol | 59.64 | 77.78 |
| TraesCS2D01G072900.1 | Wheat | cytosol, mitochondrion, nucleus | 64.57 | 65.01 |
| TraesCS2D01G073000.2 | Wheat | mitochondrion | 53.36 | 58.19 |
| OQU78677 | Sorghum | cytosol | 31.39 | 44.87 |
| TraesCS2D01G073100.1 | Wheat | nucleus | 40.36 | 44.55 |
| Zm00001d023337_P010 | Maize | cytosol | 38.12 | 43.37 |
| KXG22925 | Sorghum | nucleus | 43.27 | 42.14 |
| KXG22929 | Sorghum | nucleus | 41.03 | 36.67 |
| EES15642 | Sorghum | mitochondrion, nucleus | 40.36 | 36.36 |
| Zm00001d023339_P001 | Maize | plastid | 37.22 | 34.37 |
| TraesCS7D01G264800.1 | Wheat | cytosol | 19.28 | 26.96 |
| TraesCS7D01G327300.1 | Wheat | cytosol | 15.25 | 23.94 |
| TraesCS7D01G327500.1 | Wheat | cytosol | 10.54 | 14.92 |
| TraesCS7D01G327200.1 | Wheat | nucleus | 14.13 | 13.94 |
Protein Annotations
| EnsemblPlants:TraesCS2D01G056000.1 | EnsemblPlantsGene:TraesCS2D01G056000 | InterPro:Papain_like_cys_pep_sf | InterPro:Peptidase_C65_otubain | PANTHER:PTHR12931 | PANTHER:PTHR12931:SF18 |
| PFAM:PF10275 | SEG:seg | SUPFAM:SSF54001 | MapMan:35.1 | : | : |
Description
No Description!
Coordinates
chr2D:-:22428544..22433963
Molecular Weight (calculated)
50850.4 Da
IEP (calculated)
4.849
GRAVY (calculated)
-0.488
Length
446 amino acids
Sequence
(BLAST)
(BLAST)
001: MGINFKVKLY TDRAGSSGDG DGDGGAGPTS PPAPGPAPSP SLDPAPVSTS PLPLQPARQP PPTPIVKYTD QGLDDDDYDD WPEDEGWEVM QEDEVELPDE
101: EKFYISLFMS AQKKNLPHDL VRHDSVPLNK NEYFSLWENW NQLLDGKRTY LRPPKDCRIL SVSGVFRCPD ARPRTLGCQE PLLDLVQDYP DNDILQEIIK
201: ILCQRYVHFR RTRGDGNYFY RAFFFSYLEN LGQMQDSQAE VTRLMEHVAV SRQNFCRLKW EKAYFLNPEE YFSSVVSELN HLVNSVANGL SSDVLYKRSL
301: EEIMPLRIIS LLRLLAETEI RTREADYKSF IPEKMNVHQY CYKEVRPLDV KPTMLAMRAL TYALGIPLRL EILGRDLMAG HLQVKRLDFF PRSETGKGAF
401: HMAQSYWSST STPEPLELGS GNLLSSDGTP SLTLLCRSED CDILYR
101: EKFYISLFMS AQKKNLPHDL VRHDSVPLNK NEYFSLWENW NQLLDGKRTY LRPPKDCRIL SVSGVFRCPD ARPRTLGCQE PLLDLVQDYP DNDILQEIIK
201: ILCQRYVHFR RTRGDGNYFY RAFFFSYLEN LGQMQDSQAE VTRLMEHVAV SRQNFCRLKW EKAYFLNPEE YFSSVVSELN HLVNSVANGL SSDVLYKRSL
301: EEIMPLRIIS LLRLLAETEI RTREADYKSF IPEKMNVHQY CYKEVRPLDV KPTMLAMRAL TYALGIPLRL EILGRDLMAG HLQVKRLDFF PRSETGKGAF
401: HMAQSYWSST STPEPLELGS GNLLSSDGTP SLTLLCRSED CDILYR
001: MQNQIDMVKD EAEVAASISA IKGEEWGNCS SVEDQPSFQE EEAAKVPYVG DKEPLSSLAA EYQSGSPILL EKIKILDSQY IGIRRTRGDG NCFFRSFMFS
101: YLEHILESQD RAEVDRIKVN VEKCRKTLQN LGYTDFTFED FFALFLEQLD DILQGTEESI SYDELVNRSR DQSVSDYIVM FFRFVTAGDI RTRADFFEPF
201: ITGLSNATVD QFCKSSVEPM GEESDHIHIT ALSDALGVAI RVVYLDRSSC DSGGVTVNHH DFVPVGITNE KDEEASAPFI TLLYRPGHYD ILYPKPSCKV
301: SDNVGK
101: YLEHILESQD RAEVDRIKVN VEKCRKTLQN LGYTDFTFED FFALFLEQLD DILQGTEESI SYDELVNRSR DQSVSDYIVM FFRFVTAGDI RTRADFFEPF
201: ITGLSNATVD QFCKSSVEPM GEESDHIHIT ALSDALGVAI RVVYLDRSSC DSGGVTVNHH DFVPVGITNE KDEEASAPFI TLLYRPGHYD ILYPKPSCKV
301: SDNVGK
Arabidopsis Description
Ubiquitin thioesterase [Source:UniProtKB/TrEMBL;Acc:K9M9G0]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.