Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- plastid 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS2D01G056000.1 | Wheat | cytosol | 81.34 | 76.23 |
| TraesCS2D01G056200.1 | Wheat | cytosol | 81.58 | 72.25 |
| TraesCS2B01G073500.1 | Wheat | cytosol | 79.43 | 69.46 |
| TraesCS2A01G057400.1 | Wheat | cytosol | 55.02 | 67.25 |
| OQU78677 | Sorghum | cytosol | 33.97 | 45.51 |
| Zm00001d023337_P010 | Maize | cytosol | 41.15 | 43.88 |
| KXG22925 | Sorghum | nucleus | 43.06 | 39.3 |
| HORVU2Hr1G012520.2 | Barley | cytosol, nucleus | 40.43 | 39.12 |
| HORVU2Hr1G012540.44 | Barley | cytosol | 38.76 | 38.48 |
| EES15642 | Sorghum | mitochondrion, nucleus | 42.11 | 35.56 |
| KXG22929 | Sorghum | nucleus | 40.91 | 34.27 |
| Zm00001d023339_P001 | Maize | plastid | 38.76 | 33.54 |
| HORVU7Hr1G055280.2 | Barley | cytosol | 20.33 | 26.65 |
| HORVU7Hr1G079070.2 | Barley | cytosol | 16.99 | 16.28 |
| HORVU7Hr1G079150.11 | Barley | cytosol, nucleus, plastid | 9.33 | 14.39 |
Protein Annotations
| EnsemblPlants:HORVU2Hr1G009710.27 | EnsemblPlantsGene:HORVU2Hr1G009710 | Gene3D:1.20.1300.20 | Gene3D:3.30.200.60 | InterPro:Papain_like_cys_pep_sf | InterPro:Peptidase_C65_otubain |
| PANTHER:PTHR12931 | PANTHER:PTHR12931:SF18 | PFAM:PF10275 | SEG:seg | SUPFAM:SSF54001 | UniParc:UPI000B46B4B3 |
| UniProt:A0A287H126 | MapMan:35.1 | : | : | : | : |
Description
No Description!
Coordinates
chrchr2H:-:18543247..18548528
Molecular Weight (calculated)
47750.9 Da
IEP (calculated)
5.109
GRAVY (calculated)
-0.413
Length
418 amino acids
Sequence
(BLAST)
(BLAST)
001: PPPAPGLAPT ASLDPAAAVS TSSLPLQPPL TPIVKHTDEG LDDDDDWPED EDDEGWEVMQ EDEDELPDDE KLYIPLFMSA QERNLPHNLV RHDSVPLNKN
101: EYFSLWKNWN KLLDGKRTYL RPLKDCRVLS VSGVFRCPDA HPRTLGCQEP LLNLVHDYPD SDIVQEIIKI LCQRYVHFRR TRGDGNYFYR AFLFSXYMEN
201: LGQMQDSQAE VTRLMEHVAV SRENFCRLKW DKAYFLNPEE YFSSVVSELN HLVNSVANGL SSHDLYKRSL QEIMPLRIIS LLRLLAETEI RTREAHYKSF
301: IPGEMNVHQY CCKEVRPLDI KPTMLAMRAL TYALGIPLRL EIIGKALQDG HLQVKRLDFF PQSVSGKGAF HMVQSYWPST TTPEPLELGS GNLLLSSDGT
401: PSLTLLCRSE DCDILYRK
101: EYFSLWKNWN KLLDGKRTYL RPLKDCRVLS VSGVFRCPDA HPRTLGCQEP LLNLVHDYPD SDIVQEIIKI LCQRYVHFRR TRGDGNYFYR AFLFSXYMEN
201: LGQMQDSQAE VTRLMEHVAV SRENFCRLKW DKAYFLNPEE YFSSVVSELN HLVNSVANGL SSHDLYKRSL QEIMPLRIIS LLRLLAETEI RTREAHYKSF
301: IPGEMNVHQY CCKEVRPLDI KPTMLAMRAL TYALGIPLRL EIIGKALQDG HLQVKRLDFF PQSVSGKGAF HMVQSYWPST TTPEPLELGS GNLLLSSDGT
401: PSLTLLCRSE DCDILYRK
001: MQNQIDMVKD EAEVAASISA IKGEEWGNCS SVEDQPSFQE EEAAKVPYVG DKEPLSSLAA EYQSGSPILL EKIKILDSQY IGIRRTRGDG NCFFRSFMFS
101: YLEHILESQD RAEVDRIKVN VEKCRKTLQN LGYTDFTFED FFALFLEQLD DILQGTEESI SYDELVNRSR DQSVSDYIVM FFRFVTAGDI RTRADFFEPF
201: ITGLSNATVD QFCKSSVEPM GEESDHIHIT ALSDALGVAI RVVYLDRSSC DSGGVTVNHH DFVPVGITNE KDEEASAPFI TLLYRPGHYD ILYPKPSCKV
301: SDNVGK
101: YLEHILESQD RAEVDRIKVN VEKCRKTLQN LGYTDFTFED FFALFLEQLD DILQGTEESI SYDELVNRSR DQSVSDYIVM FFRFVTAGDI RTRADFFEPF
201: ITGLSNATVD QFCKSSVEPM GEESDHIHIT ALSDALGVAI RVVYLDRSSC DSGGVTVNHH DFVPVGITNE KDEEASAPFI TLLYRPGHYD ILYPKPSCKV
301: SDNVGK
Arabidopsis Description
Ubiquitin thioesterase [Source:UniProtKB/TrEMBL;Acc:K9M9G0]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.