Subcellular Localization
min:
: max
Winner_takes_all: nucleus, cytosol
Predictor Summary:
Predictor Summary:
- cytosol 1
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS2D01G073100.1 | Wheat | nucleus | 69.44 | 74.26 |
| TraesCS2B01G089600.1 | Wheat | nucleus | 66.9 | 71.71 |
| TraesCS2B01G078500.1 | Wheat | nucleus | 67.13 | 71.6 |
| TraesCS2B01G089800.1 | Wheat | nucleus | 62.96 | 64.61 |
| HORVU2Hr1G012540.44 | Barley | cytosol | 61.57 | 63.18 |
| TraesCS2A01G074500.1 | Wheat | nucleus | 54.63 | 60.2 |
| HORVU2Hr1G009710.27 | Barley | cytosol | 39.12 | 40.43 |
| OQU78677 | Sorghum | cytosol | 26.16 | 36.22 |
| Zm00001d023337_P010 | Maize | cytosol | 31.02 | 34.18 |
| KXG22925 | Sorghum | nucleus | 36.11 | 34.06 |
| HORVU7Hr1G055280.2 | Barley | cytosol | 22.22 | 30.09 |
| EES15642 | Sorghum | mitochondrion, nucleus | 34.03 | 29.7 |
| Zm00001d023339_P001 | Maize | plastid | 32.41 | 28.99 |
| KXG22929 | Sorghum | nucleus | 32.64 | 28.26 |
| HORVU7Hr1G079070.2 | Barley | cytosol | 17.82 | 17.66 |
| HORVU7Hr1G079150.11 | Barley | cytosol, nucleus, plastid | 9.49 | 15.13 |
Protein Annotations
| EnsemblPlants:HORVU2Hr1G012520.2 | EnsemblPlantsGene:HORVU2Hr1G012520 | Gene3D:1.20.1300.20 | Gene3D:3.30.200.60 | InterPro:Papain_like_cys_pep_sf | InterPro:Peptidase_C65_otubain |
| PANTHER:PTHR12931 | PANTHER:PTHR12931:SF18 | PFAM:PF10275 | SEG:seg | SUPFAM:SSF54001 | MapMan:35.1 |
Description
No Description!
Coordinates
chrchr2H:+:26257938..26303623
Molecular Weight (calculated)
48730.0 Da
IEP (calculated)
6.780
GRAVY (calculated)
-0.637
Length
432 amino acids
Sequence
(BLAST)
(BLAST)
001: RDEGRSEKKP RVSLQRSKKM GPKRQYDDLA QPSKAGSSGD GGGGGGDDRP SKAPRLSPAP PPPPPAQSHS RDQTALPSSL PPLQPPPVDK DAVGLEEGEI
101: EDDADPGEDD QDSQGKLGVS LPELSLGQLL VGETYVRSPK DHGVLTGGLR CPDAYPKILG RQEQLSELVR ESPDNSIIQE KMKILNKHYV RFRRTLRDGS
201: CFYRAFMFSY MEILRHLQDK QDEVTRLMEC LDISKDRFSR LRWHKADFSI DPEKYFSRVV SELEEVINVI AAGCTSEWLY QRSLQESFSG RVIPLLRLLT
301: ETEIRTEKFY KQYIPENLSV CQFCRKTVRS LDAEASTIQM RALTFALGIP LRVEVVDNSL MDQGVLVKRL DFFHETDWDK GPLRLTRGYL SSSTAPIQLK
401: QGSYNADLLS PDGTPMPTLL CRRDQCDILY RK
101: EDDADPGEDD QDSQGKLGVS LPELSLGQLL VGETYVRSPK DHGVLTGGLR CPDAYPKILG RQEQLSELVR ESPDNSIIQE KMKILNKHYV RFRRTLRDGS
201: CFYRAFMFSY MEILRHLQDK QDEVTRLMEC LDISKDRFSR LRWHKADFSI DPEKYFSRVV SELEEVINVI AAGCTSEWLY QRSLQESFSG RVIPLLRLLT
301: ETEIRTEKFY KQYIPENLSV CQFCRKTVRS LDAEASTIQM RALTFALGIP LRVEVVDNSL MDQGVLVKRL DFFHETDWDK GPLRLTRGYL SSSTAPIQLK
401: QGSYNADLLS PDGTPMPTLL CRRDQCDILY RK
001: MQNQIDMVKD EAEVAASISA IKGEEWGNCS SVEDQPSFQE EEAAKVPYVG DKEPLSSLAA EYQSGSPILL EKIKILDSQY IGIRRTRGDG NCFFRSFMFS
101: YLEHILESQD RAEVDRIKVN VEKCRKTLQN LGYTDFTFED FFALFLEQLD DILQGTEESI SYDELVNRSR DQSVSDYIVM FFRFVTAGDI RTRADFFEPF
201: ITGLSNATVD QFCKSSVEPM GEESDHIHIT ALSDALGVAI RVVYLDRSSC DSGGVTVNHH DFVPVGITNE KDEEASAPFI TLLYRPGHYD ILYPKPSCKV
301: SDNVGK
101: YLEHILESQD RAEVDRIKVN VEKCRKTLQN LGYTDFTFED FFALFLEQLD DILQGTEESI SYDELVNRSR DQSVSDYIVM FFRFVTAGDI RTRADFFEPF
201: ITGLSNATVD QFCKSSVEPM GEESDHIHIT ALSDALGVAI RVVYLDRSSC DSGGVTVNHH DFVPVGITNE KDEEASAPFI TLLYRPGHYD ILYPKPSCKV
301: SDNVGK
Arabidopsis Description
Ubiquitin thioesterase [Source:UniProtKB/TrEMBL;Acc:K9M9G0]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.