Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- cytosol 1
- mitochondrion 1
- nucleus 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS2B01G089600.1 | Wheat | nucleus | 92.08 | 92.31 |
| TraesCS2B01G078500.1 | Wheat | nucleus | 90.1 | 89.88 |
| TraesCS2A01G074500.1 | Wheat | nucleus | 69.55 | 71.68 |
| HORVU2Hr1G012520.2 | Barley | cytosol, nucleus | 74.26 | 69.44 |
| HORVU2Hr1G012540.44 | Barley | cytosol | 58.91 | 56.53 |
| TraesCS2D01G073000.2 | Wheat | mitochondrion | 44.06 | 43.52 |
| TraesCS2D01G056000.1 | Wheat | cytosol | 44.55 | 40.36 |
| OQU78677 | Sorghum | cytosol | 29.7 | 38.46 |
| TraesCS2D01G056200.1 | Wheat | cytosol | 44.8 | 38.35 |
| TraesCS2D01G072900.1 | Wheat | cytosol, mitochondrion, nucleus | 38.61 | 35.21 |
| Zm00001d023337_P010 | Maize | cytosol | 33.91 | 34.95 |
| KXG22925 | Sorghum | nucleus | 37.87 | 33.41 |
| TraesCS7D01G264800.1 | Wheat | cytosol | 25.5 | 32.29 |
| KXG22929 | Sorghum | nucleus | 36.63 | 29.66 |
| EES15642 | Sorghum | mitochondrion, nucleus | 36.14 | 29.49 |
| Zm00001d023339_P001 | Maize | plastid | 33.91 | 28.36 |
| TraesCS7D01G327300.1 | Wheat | cytosol | 18.32 | 26.06 |
| TraesCS7D01G327500.1 | Wheat | cytosol | 13.12 | 16.83 |
| TraesCS7D01G327200.1 | Wheat | nucleus | 18.81 | 16.81 |
Protein Annotations
| EnsemblPlants:TraesCS2D01G073100.1 | EnsemblPlantsGene:TraesCS2D01G073100 | InterPro:Papain_like_cys_pep_sf | InterPro:Peptidase_C65_otubain | PANTHER:PTHR12931 | PANTHER:PTHR12931:SF18 |
| PFAM:PF10275 | SEG:seg | SUPFAM:SSF54001 | MapMan:35.1 | : | : |
Description
No Description!
Coordinates
chr2D:+:30655980..30659492
Molecular Weight (calculated)
45151.9 Da
IEP (calculated)
4.475
GRAVY (calculated)
-0.625
Length
404 amino acids
Sequence
(BLAST)
(BLAST)
001: MGPKREYDDL AQPSSEGSSG DDDGGGGDAR PTKAPRLPAA PPPPAQSPSR DQTGLPTSPS PLQPPGSPPP PADKDPVELE EGELGDDEYS GEDEEDDQDS
101: EGELGGSLPD GRTDRALTGG FRWPHARPTA LGPQEQLSEL VRESPDNSII QEKMKILSKH YVLFRRTRQD GSCFYRAFMF SYMEILRQMQ DKQAEVTRLM
201: ECLDMSKDRF SCLEWNKAYF SIDPEEYFSS VVSELNEVLD VIAAGCTSEW LYQRSLQESF SGRIISLLRL ITETEIRTDE FYKQSIPTNL NVLQFCWKAV
301: RSLDAEATTT QMRALTYALG IPLRVEVVDK SSTDRGVLVK RLDFFHESDL EKGPLRLTRS YLSSSTAPIP LKQGSYDADL LSSDGTPMLT LLCRRGHCDI
401: LYRK
101: EGELGGSLPD GRTDRALTGG FRWPHARPTA LGPQEQLSEL VRESPDNSII QEKMKILSKH YVLFRRTRQD GSCFYRAFMF SYMEILRQMQ DKQAEVTRLM
201: ECLDMSKDRF SCLEWNKAYF SIDPEEYFSS VVSELNEVLD VIAAGCTSEW LYQRSLQESF SGRIISLLRL ITETEIRTDE FYKQSIPTNL NVLQFCWKAV
301: RSLDAEATTT QMRALTYALG IPLRVEVVDK SSTDRGVLVK RLDFFHESDL EKGPLRLTRS YLSSSTAPIP LKQGSYDADL LSSDGTPMLT LLCRRGHCDI
401: LYRK
001: MQNQIDMVKD EAEVAASISA IKGEEWGNCS SVEDQPSFQE EEAAKVPYVG DKEPLSSLAA EYQSGSPILL EKIKILDSQY IGIRRTRGDG NCFFRSFMFS
101: YLEHILESQD RAEVDRIKVN VEKCRKTLQN LGYTDFTFED FFALFLEQLD DILQGTEESI SYDELVNRSR DQSVSDYIVM FFRFVTAGDI RTRADFFEPF
201: ITGLSNATVD QFCKSSVEPM GEESDHIHIT ALSDALGVAI RVVYLDRSSC DSGGVTVNHH DFVPVGITNE KDEEASAPFI TLLYRPGHYD ILYPKPSCKV
301: SDNVGK
101: YLEHILESQD RAEVDRIKVN VEKCRKTLQN LGYTDFTFED FFALFLEQLD DILQGTEESI SYDELVNRSR DQSVSDYIVM FFRFVTAGDI RTRADFFEPF
201: ITGLSNATVD QFCKSSVEPM GEESDHIHIT ALSDALGVAI RVVYLDRSSC DSGGVTVNHH DFVPVGITNE KDEEASAPFI TLLYRPGHYD ILYPKPSCKV
301: SDNVGK
Arabidopsis Description
Ubiquitin thioesterase [Source:UniProtKB/TrEMBL;Acc:K9M9G0]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.