Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- cytosol 1
- mitochondrion 1
- nucleus 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS2B01G089600.1 | Wheat | nucleus | 90.37 | 90.82 |
| TraesCS2D01G073100.1 | Wheat | nucleus | 89.88 | 90.1 |
| TraesCS2B01G089800.1 | Wheat | nucleus | 74.81 | 71.97 |
| TraesCS2A01G074500.1 | Wheat | nucleus | 67.9 | 70.15 |
| HORVU2Hr1G012520.2 | Barley | cytosol, nucleus | 71.6 | 67.13 |
| HORVU2Hr1G012540.44 | Barley | cytosol | 57.78 | 55.58 |
| TraesCS2B01G089100.1 | Wheat | nucleus | 35.31 | 47.51 |
| TraesCS2B01G073500.1 | Wheat | cytosol | 45.43 | 38.49 |
| OQU78677 | Sorghum | cytosol | 29.38 | 38.14 |
| Zm00001d023337_P010 | Maize | cytosol | 33.58 | 34.69 |
| TraesCS2B01G089000.1 | Wheat | cytosol | 37.78 | 34.23 |
| KXG22925 | Sorghum | nucleus | 37.78 | 33.41 |
| TraesCS7B01G161900.2 | Wheat | cytosol | 24.44 | 31.03 |
| EES15642 | Sorghum | mitochondrion, nucleus | 37.04 | 30.3 |
| KXG22929 | Sorghum | nucleus | 36.79 | 29.86 |
| Zm00001d023339_P001 | Maize | plastid | 33.83 | 28.36 |
| TraesCS7B01G231500.1 | Wheat | cytosol | 20.49 | 20.1 |
| TraesCS7B01G157400.1 | Wheat | cytosol | 19.01 | 18.78 |
| TraesCS7B01G231300.1 | Wheat | nucleus | 13.33 | 16.88 |
Protein Annotations
| EnsemblPlants:TraesCS2B01G078500.1 | EnsemblPlantsGene:TraesCS2B01G078500 | InterPro:Papain_like_cys_pep_sf | InterPro:Peptidase_C65_otubain | PANTHER:PTHR12931 | PANTHER:PTHR12931:SF18 |
| PFAM:PF10275 | SEG:seg | SUPFAM:SSF54001 | MapMan:35.1 | : | : |
Description
No Description!
Coordinates
chr2B:+:43799962..43803866
Molecular Weight (calculated)
44988.0 Da
IEP (calculated)
4.635
GRAVY (calculated)
-0.585
Length
405 amino acids
Sequence
(BLAST)
(BLAST)
001: MGPKRKLDDL AQPSSSGDHG GGGGGGDDRP TKAPRLSPSP PPPPPAQSPS RDQTALPTSP PPLQPPGSPP PPADKDPVEL EEGELGDDEN SGEEEQDDQD
101: SEGELGGSLP DGRTDLANTG GFGCPHARPT ALGPLEQLLE LVRDSPDNSI IQEKMKILSK HYVLFRRTRE DGSCFYRAFI FSYMEILRQM QDKQAEVTRL
201: MECLDMSKDR FSCLEWNRAY FSIDPEEYFS SVVSELNEVL NVIAAGCTSE WLYQRSLQES FSGRIISLLR LLTETEIRTD EFYKQSIPKN LNLLQFCWKA
301: VRSLDAEATT TQMRALTYAL GIPLRVEVVD KSSTDRGVLV KRLDFFHESD LEKGPLRLTR SYLSSSTAPI PLKQGSYDAD LLSSDGTPML TLLCRRGHCD
401: ILYRK
101: SEGELGGSLP DGRTDLANTG GFGCPHARPT ALGPLEQLLE LVRDSPDNSI IQEKMKILSK HYVLFRRTRE DGSCFYRAFI FSYMEILRQM QDKQAEVTRL
201: MECLDMSKDR FSCLEWNRAY FSIDPEEYFS SVVSELNEVL NVIAAGCTSE WLYQRSLQES FSGRIISLLR LLTETEIRTD EFYKQSIPKN LNLLQFCWKA
301: VRSLDAEATT TQMRALTYAL GIPLRVEVVD KSSTDRGVLV KRLDFFHESD LEKGPLRLTR SYLSSSTAPI PLKQGSYDAD LLSSDGTPML TLLCRRGHCD
401: ILYRK
001: MQNQIDMVKD EAEVAASISA IKGEEWGNCS SVEDQPSFQE EEAAKVPYVG DKEPLSSLAA EYQSGSPILL EKIKILDSQY IGIRRTRGDG NCFFRSFMFS
101: YLEHILESQD RAEVDRIKVN VEKCRKTLQN LGYTDFTFED FFALFLEQLD DILQGTEESI SYDELVNRSR DQSVSDYIVM FFRFVTAGDI RTRADFFEPF
201: ITGLSNATVD QFCKSSVEPM GEESDHIHIT ALSDALGVAI RVVYLDRSSC DSGGVTVNHH DFVPVGITNE KDEEASAPFI TLLYRPGHYD ILYPKPSCKV
301: SDNVGK
101: YLEHILESQD RAEVDRIKVN VEKCRKTLQN LGYTDFTFED FFALFLEQLD DILQGTEESI SYDELVNRSR DQSVSDYIVM FFRFVTAGDI RTRADFFEPF
201: ITGLSNATVD QFCKSSVEPM GEESDHIHIT ALSDALGVAI RVVYLDRSSC DSGGVTVNHH DFVPVGITNE KDEEASAPFI TLLYRPGHYD ILYPKPSCKV
301: SDNVGK
Arabidopsis Description
Ubiquitin thioesterase [Source:UniProtKB/TrEMBL;Acc:K9M9G0]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.