Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- cytosol 1
- mitochondrion 1
- nucleus 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS2A01G074100.1 | Wheat | mitochondrion | 93.69 | 69.63 |
| TraesCS2D01G073000.2 | Wheat | mitochondrion | 93.36 | 68.7 |
| TraesCS2B01G089000.1 | Wheat | cytosol | 63.79 | 42.95 |
| TraesCS2B01G073500.1 | Wheat | cytosol | 68.11 | 42.89 |
| OQU78677 | Sorghum | cytosol | 39.53 | 38.14 |
| TraesCS2B01G089800.1 | Wheat | nucleus | 49.83 | 35.63 |
| TraesCS2B01G078500.1 | Wheat | nucleus | 47.51 | 35.31 |
| TraesCS2B01G089600.1 | Wheat | nucleus | 47.18 | 35.24 |
| Zm00001d023337_P010 | Maize | cytosol | 44.85 | 34.44 |
| KXG22925 | Sorghum | nucleus | 50.5 | 33.19 |
| EES15642 | Sorghum | mitochondrion, nucleus | 44.85 | 27.27 |
| Zm00001d023339_P001 | Maize | plastid | 43.19 | 26.92 |
| KXG22929 | Sorghum | nucleus | 43.85 | 26.45 |
| TraesCS7B01G161900.2 | Wheat | cytosol | 19.27 | 18.18 |
| TraesCS7B01G157400.1 | Wheat | cytosol | 17.61 | 12.93 |
| TraesCS7B01G231500.1 | Wheat | cytosol | 17.28 | 12.59 |
| TraesCS7B01G231300.1 | Wheat | nucleus | 8.31 | 7.81 |
Protein Annotations
| EnsemblPlants:TraesCS2B01G089100.1 | EnsemblPlantsGene:TraesCS2B01G089100 | Gene3D:1.20.1300.20 | InterPro:Papain_like_cys_pep_sf | InterPro:Peptidase_C65_otubain | PANTHER:PTHR12931 |
| PANTHER:PTHR12931:SF18 | PFAM:PF10275 | SEG:seg | SUPFAM:SSF54001 | MapMan:35.2 | : |
Description
No Description!
Coordinates
chr2B:+:50346189..50352116
Molecular Weight (calculated)
34621.3 Da
IEP (calculated)
5.956
GRAVY (calculated)
-0.578
Length
301 amino acids
Sequence
(BLAST)
(BLAST)
001: MDEGPDDENS QEVADDERKN WKQLLDGKRT YLRPPREHHV VSDVFKCPDT RKAALGRQKR LSRLVEKHSK NFFKEKIKEN LGLMQDSQAE VTRLMEHVAM
101: SRENFCRLKW DKAYFLNPEE YFSSVVSEFS HLVNSVANGL SSDELYNRSI QEIVPLRIIS LLRLLAETEI RSREDDFKSL LPKEMDALTL RYCCKELRPL
201: DVEAEVLPMR ALTYALGIPL RVETVGEGSD RGIQVERLDL FPRSESGKGP LHLVQSYWSS ITTPEPQDIG SGNLLSSDGT PLLTLLCRPR HCDILYRSEQ
301: N
101: SRENFCRLKW DKAYFLNPEE YFSSVVSEFS HLVNSVANGL SSDELYNRSI QEIVPLRIIS LLRLLAETEI RSREDDFKSL LPKEMDALTL RYCCKELRPL
201: DVEAEVLPMR ALTYALGIPL RVETVGEGSD RGIQVERLDL FPRSESGKGP LHLVQSYWSS ITTPEPQDIG SGNLLSSDGT PLLTLLCRPR HCDILYRSEQ
301: N
001: MQNQIDMVKD EAEVAASISA IKGEEWGNCS SVEDQPSFQE EEAAKVPYVG DKEPLSSLAA EYQSGSPILL EKIKILDSQY IGIRRTRGDG NCFFRSFMFS
101: YLEHILESQD RAEVDRIKVN VEKCRKTLQN LGYTDFTFED FFALFLEQLD DILQGTEESI SYDELVNRSR DQSVSDYIVM FFRFVTAGDI RTRADFFEPF
201: ITGLSNATVD QFCKSSVEPM GEESDHIHIT ALSDALGVAI RVVYLDRSSC DSGGVTVNHH DFVPVGITNE KDEEASAPFI TLLYRPGHYD ILYPKPSCKV
301: SDNVGK
101: YLEHILESQD RAEVDRIKVN VEKCRKTLQN LGYTDFTFED FFALFLEQLD DILQGTEESI SYDELVNRSR DQSVSDYIVM FFRFVTAGDI RTRADFFEPF
201: ITGLSNATVD QFCKSSVEPM GEESDHIHIT ALSDALGVAI RVVYLDRSSC DSGGVTVNHH DFVPVGITNE KDEEASAPFI TLLYRPGHYD ILYPKPSCKV
301: SDNVGK
Arabidopsis Description
Ubiquitin thioesterase [Source:UniProtKB/TrEMBL;Acc:K9M9G0]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.