Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- plastid 2
- nucleus 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS2D01G073100.1 | Wheat | nucleus | 71.68 | 69.55 |
| TraesCS2B01G078500.1 | Wheat | nucleus | 70.15 | 67.9 |
| HORVU2Hr1G012540.44 | Barley | cytosol | 59.44 | 55.34 |
| HORVU2Hr1G012520.2 | Barley | cytosol, nucleus | 60.2 | 54.63 |
| TraesCS2A01G074100.1 | Wheat | mitochondrion | 43.11 | 41.73 |
| OQU78677 | Sorghum | cytosol | 29.59 | 37.18 |
| Zm00001d023337_P010 | Maize | cytosol | 33.42 | 33.42 |
| TraesCS2A01G074000.1 | Wheat | cytosol | 36.48 | 32.65 |
| KXG22925 | Sorghum | nucleus | 35.46 | 30.35 |
| TraesCS7A01G263900.1 | Wheat | cytosol | 23.98 | 29.47 |
| TraesCS2A01G057400.1 | Wheat | cytosol | 25.51 | 29.24 |
| EES15642 | Sorghum | mitochondrion, nucleus | 34.69 | 27.47 |
| Zm00001d023339_P001 | Maize | plastid | 33.42 | 27.12 |
| KXG22929 | Sorghum | nucleus | 34.18 | 26.85 |
| Os04t0652600-01 | Rice | nucleus | 25.51 | 18.25 |
Protein Annotations
| EnsemblPlants:TraesCS2A01G074500.1 | EnsemblPlantsGene:TraesCS2A01G074500 | InterPro:Papain_like_cys_pep_sf | InterPro:Peptidase_C65_otubain | PANTHER:PTHR12931 | PANTHER:PTHR12931:SF18 |
| PFAM:PF10275 | SEG:seg | SUPFAM:SSF54001 | MapMan:35.1 | : | : |
Description
No Description!
Coordinates
chr2A:+:32916115..32919890
Molecular Weight (calculated)
45145.9 Da
IEP (calculated)
10.117
GRAVY (calculated)
-0.395
Length
392 amino acids
Sequence
(BLAST)
(BLAST)
001: MTWPSHPARE AAETAAAAAA AAAAMAMLDR RRPHACPHRP RSRTLATRRR FPLQRPRRLP PTRIRWSWKK GSEEMMKIQG RKKRMIRIRK GSSRGHFLMG
101: EPTVPSLVVS GVHMLPTALG PQEQLSELVR ESPDNSIIQE KMKILSKHYV LFRRTRQDGS CFYRAFIFSY MEILRQMQDK QAEVTRLMEC LDMSKDRFSC
201: LEWNKAYFSI DPEEYFSSVV SELNEVLNVI AAGCTSEWLY QRSLQESFSG RIISLLRLIT ETEIRTDEFY KQSIPKNLNV LQFCWKAVRS LDAEATATQM
301: RALTYALGIP LRVEVVDKSL TDQGVLVKRL DFFHEFDMEK GPLRLTRSYL SSSTARIPLK QGSYDGDLLS SDGTPMLTLL CRHGHCDILY RK
101: EPTVPSLVVS GVHMLPTALG PQEQLSELVR ESPDNSIIQE KMKILSKHYV LFRRTRQDGS CFYRAFIFSY MEILRQMQDK QAEVTRLMEC LDMSKDRFSC
201: LEWNKAYFSI DPEEYFSSVV SELNEVLNVI AAGCTSEWLY QRSLQESFSG RIISLLRLIT ETEIRTDEFY KQSIPKNLNV LQFCWKAVRS LDAEATATQM
301: RALTYALGIP LRVEVVDKSL TDQGVLVKRL DFFHEFDMEK GPLRLTRSYL SSSTARIPLK QGSYDGDLLS SDGTPMLTLL CRHGHCDILY RK
001: MQNQIDMVKD EAEVAASISA IKGEEWGNCS SVEDQPSFQE EEAAKVPYVG DKEPLSSLAA EYQSGSPILL EKIKILDSQY IGIRRTRGDG NCFFRSFMFS
101: YLEHILESQD RAEVDRIKVN VEKCRKTLQN LGYTDFTFED FFALFLEQLD DILQGTEESI SYDELVNRSR DQSVSDYIVM FFRFVTAGDI RTRADFFEPF
201: ITGLSNATVD QFCKSSVEPM GEESDHIHIT ALSDALGVAI RVVYLDRSSC DSGGVTVNHH DFVPVGITNE KDEEASAPFI TLLYRPGHYD ILYPKPSCKV
301: SDNVGK
101: YLEHILESQD RAEVDRIKVN VEKCRKTLQN LGYTDFTFED FFALFLEQLD DILQGTEESI SYDELVNRSR DQSVSDYIVM FFRFVTAGDI RTRADFFEPF
201: ITGLSNATVD QFCKSSVEPM GEESDHIHIT ALSDALGVAI RVVYLDRSSC DSGGVTVNHH DFVPVGITNE KDEEASAPFI TLLYRPGHYD ILYPKPSCKV
301: SDNVGK
Arabidopsis Description
Ubiquitin thioesterase [Source:UniProtKB/TrEMBL;Acc:K9M9G0]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.