Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS7B01G231500.1 | Wheat | cytosol | 72.57 | 79.42 |
| TraesCS7D01G327300.1 | Wheat | cytosol | 45.58 | 72.54 |
| TraesCS7D01G327500.1 | Wheat | cytosol | 48.23 | 69.21 |
| HORVU7Hr1G079070.2 | Barley | cytosol | 64.6 | 66.97 |
| TraesCS7D01G264800.1 | Wheat | cytosol | 16.59 | 23.51 |
| TraesCS2D01G073100.1 | Wheat | nucleus | 16.81 | 18.81 |
| TraesCS2D01G073000.2 | Wheat | mitochondrion | 14.82 | 16.38 |
| Os04t0652600-01 | Rice | nucleus | 18.14 | 14.96 |
| TraesCS2D01G056000.1 | Wheat | cytosol | 13.94 | 14.13 |
| TraesCS2D01G056200.1 | Wheat | cytosol | 14.6 | 13.98 |
| TraesCS2D01G072900.1 | Wheat | cytosol, mitochondrion, nucleus | 11.5 | 11.74 |
Protein Annotations
| EnsemblPlants:TraesCS7D01G327200.1 | EnsemblPlantsGene:TraesCS7D01G327200 | Gene3D:1.20.1300.20 | Gene3D:3.30.200.60 | InterPro:Papain_like_cys_pep_sf | InterPro:Peptidase_C65_otubain |
| ncoils:Coil | PANTHER:PTHR12931 | PFAM:PF10275 | SEG:seg | SUPFAM:SSF54001 | MapMan:35.1 |
Description
No Description!
Coordinates
chr7D:-:417926656..417931341
Molecular Weight (calculated)
50089.4 Da
IEP (calculated)
4.305
GRAVY (calculated)
-0.387
Length
452 amino acids
Sequence
(BLAST)
(BLAST)
001: MAGSGGSPDA DDPNCGGAGA EPSRTPQESD DLYSAPASPL STRPSGQPPG TSVVANEGSA SSSAWLSDDD DEPTDRYKNP ASVSFLLGPS SRTMGASSSS
101: SFSSDSWIGS DRTCGGASTS SSLDASNYRD LYRDPPSETL SGCIISAQAW KDSRIALEVP YAWLFQILEA PFWSHEASDA VRASWRDEYE ACDDFSMVLQ
201: TSQNGCRKIL QKEPLSSLPH EFENEIMKDK AKKLLANYSE YRKEQLVKVS HEEELRLLGA LEPMWEKFQR LHLPGSYSDL HDAFVGFILE CMEQKQKLSV
301: SGYQEWLFQE SQNEQKFANI LLYLRLVTAI EICTEVETFK SYITELGQGM PDAIGYCLEE VLPVEEDAQQ VNLTALTNVL QVPLRVVNID VSPIEEPNIH
401: IIYESPDSSV PTVTLLYRPG HYDIIYEKQI AEKTSAGNKY CFIFLLMVGV KR
101: SFSSDSWIGS DRTCGGASTS SSLDASNYRD LYRDPPSETL SGCIISAQAW KDSRIALEVP YAWLFQILEA PFWSHEASDA VRASWRDEYE ACDDFSMVLQ
201: TSQNGCRKIL QKEPLSSLPH EFENEIMKDK AKKLLANYSE YRKEQLVKVS HEEELRLLGA LEPMWEKFQR LHLPGSYSDL HDAFVGFILE CMEQKQKLSV
301: SGYQEWLFQE SQNEQKFANI LLYLRLVTAI EICTEVETFK SYITELGQGM PDAIGYCLEE VLPVEEDAQQ VNLTALTNVL QVPLRVVNID VSPIEEPNIH
401: IIYESPDSSV PTVTLLYRPG HYDIIYEKQI AEKTSAGNKY CFIFLLMVGV KR
001: MQNQIDMVKD EAEVAASISA IKGEEWGNCS SVEDQPSFQE EEAAKVPYVG DKEPLSSLAA EYQSGSPILL EKIKILDSQY IGIRRTRGDG NCFFRSFMFS
101: YLEHILESQD RAEVDRIKVN VEKCRKTLQN LGYTDFTFED FFALFLEQLD DILQGTEESI SYDELVNRSR DQSVSDYIVM FFRFVTAGDI RTRADFFEPF
201: ITGLSNATVD QFCKSSVEPM GEESDHIHIT ALSDALGVAI RVVYLDRSSC DSGGVTVNHH DFVPVGITNE KDEEASAPFI TLLYRPGHYD ILYPKPSCKV
301: SDNVGK
101: YLEHILESQD RAEVDRIKVN VEKCRKTLQN LGYTDFTFED FFALFLEQLD DILQGTEESI SYDELVNRSR DQSVSDYIVM FFRFVTAGDI RTRADFFEPF
201: ITGLSNATVD QFCKSSVEPM GEESDHIHIT ALSDALGVAI RVVYLDRSSC DSGGVTVNHH DFVPVGITNE KDEEASAPFI TLLYRPGHYD ILYPKPSCKV
301: SDNVGK
Arabidopsis Description
Ubiquitin thioesterase [Source:UniProtKB/TrEMBL;Acc:K9M9G0]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.