CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 6
endoplasmic reticulum 2
plasma membrane 3
nucleus 1
extracellular 1
vacuole 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	nucleus, plastid, secretory
BaCelLo:	plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	endoplasmic reticulum
Plant-mPloc:	nucleus, plasma membrane
Predotar:	plastid
PProwler:	secretory
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH61627	Soybean	endoplasmic reticulum, plasma membrane, plastid	64.85	64.85
KRH01450	Soybean	endoplasmic reticulum, plasma membrane, plastid	28.48	42.73
KRH45165	Soybean	endoplasmic reticulum, plasma membrane, plastid	29.09	41.03
KRH02920	Soybean	endoplasmic reticulum, nucleus, plasma membrane	40.61	40.85
KRG93760	Soybean	plastid	26.06	40.57
KRH01448	Soybean	plastid	26.67	35.77
KRH05332	Soybean	plastid	36.36	34.09
KRH15701	Soybean	plastid	36.36	32.97
Solyc07g006600.1.1	Tomato	endoplasmic reticulum, nucleus, plastid	34.55	30.81
KRH45164	Soybean	plastid	22.42	29.37
PGSC0003DMT400070631	Potato	nucleus	33.94	29.02
KRH18976	Soybean	plasma membrane	40.61	28.63

Protein Annotations

EMBL:ACUP02003417	EMBL:BT091512	EnsemblPlants:KRH52294	EnsemblPlantsGene:GLYMA_06G059500	EntrezGene:100500572	GO:GO:0005575
GO:GO:0016020	GO:GO:0016021	PANTHER:PTHR33228	PANTHER:PTHR33228:SF5	ProteinID:KRH52294	ProteinID:KRH52294.1
SEG:seg	TMHMM:TMhelix	UniParc:UPI0001B14EAA	UniProt:C6T255	MapMan:35.2	:

Description

hypothetical protein

Coordinates

chr6:+:4511463..4512498

Molecular Weight (calculated)

17951.0 Da

IEP (calculated)

5.530

GRAVY (calculated)

-0.461

Length

165 amino acids

Sequence
(BLAST)

001: MRTIPTTTST TIAPTATTSS LTTSPSQHSS TWHSPVPYLF GGLAAMLGLI AFALLILACS YWKLSGQLQN EENAERDLES VVGGEKQGDS ANKESVTVYE
101: EKILVIMAGD EKPTFLATPK ASSFVPHGVP NHFEENLENH VTSEKSEKNH VQQPTSPQQQ SQPRQ

Best Arabidopsis Sequence Match ( AT5G57685.1 )
(BLAST)

001: MEGRQYYPPR ENVEGNRTTM GGGPHSPWHS PVPYLFGGLA AMLGLIAFAL LILACSYWRL SGYLDGEENQ SRERDLEVGD VKPDKTAVKP VALPEKFLVI
101: MAGNVKPTYL ATPSVKTCTC DDDDDEDDDV EGSDQVVPRS SESNGETH

Arabidopsis Description

GDU3Protein GLUTAMINE DUMPER 3 [Source:UniProtKB/Swiss-Prot;Acc:Q9FHH5]
SUBAcon: [endoplasmic reticulum,cytosol,plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.