Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- nucleus 2
- plastid 4
- endoplasmic reticulum 2
- plasma membrane 3
- extracellular 1
- vacuole 1
- golgi 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH45164 | Soybean | plastid | 69.11 | 67.46 |
| KRH01450 | Soybean | endoplasmic reticulum, plasma membrane, plastid | 39.84 | 44.55 |
| KRH45165 | Soybean | endoplasmic reticulum, plasma membrane, plastid | 40.65 | 42.73 |
| KRG93760 | Soybean | plastid | 35.77 | 41.51 |
| Solyc02g089450.1.1 | Tomato | plastid | 29.27 | 36.73 |
| PGSC0003DMT400003749 | Potato | plastid | 30.08 | 35.58 |
| KRH52294 | Soybean | plastid | 35.77 | 26.67 |
| KRH61627 | Soybean | endoplasmic reticulum, plasma membrane, plastid | 35.77 | 26.67 |
| KRH02920 | Soybean | endoplasmic reticulum, nucleus, plasma membrane | 34.15 | 25.61 |
| KRH05332 | Soybean | plastid | 34.15 | 23.86 |
| KRH15701 | Soybean | plastid | 32.52 | 21.98 |
| KRH18976 | Soybean | plasma membrane | 34.15 | 17.95 |
Protein Annotations
| EMBL:ACUP02011514 | EnsemblPlants:KRH01448 | EnsemblPlantsGene:GLYMA_18G277600 | EntrezGene:100781671 | GO:GO:0005575 | GO:GO:0016020 |
| GO:GO:0016021 | PANTHER:PTHR33228 | PANTHER:PTHR33228:SF18 | ProteinID:KRH01448 | ProteinID:KRH01448.1 | SEG:seg |
| TMHMM:TMhelix | UniParc:UPI000233F3E8 | UniProt:K7MV46 | MapMan:35.1 | : | : |
Description
hypothetical protein
Coordinates
chr18:-:55931856..55932610
Molecular Weight (calculated)
13160.8 Da
IEP (calculated)
5.004
GRAVY (calculated)
-0.058
Length
123 amino acids
Sequence
(BLAST)
(BLAST)
001: MRPINSVSPS SPMRASGVNI WKSPIPYLFG GLAVMLAIIS MALVILVCSY RKRDSQSSSE VNEDVKSQAM ANNLETNSEP EVLVIMAGDH NPTYLAKPIT
101: SSIFCTCGAQ PSEPNPSSTS TPE
101: SSIFCTCGAQ PSEPNPSSTS TPE
001: MQTMEGRQYN YQDSINASSS MVVPHSPWHS PVPYLFGGLA AMLALICVAL LILACSYWRL SGSAERDLEA GDDAKPDNDT NKTKHTEMPE KFLVIMAGDV
101: RPTYLATPAT RSEQSCTCGD HNEEEGRRG
101: RPTYLATPAT RSEQSCTCGD HNEEEGRRG
Arabidopsis Description
GDU2Protein GLUTAMINE DUMPER 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9SW07]
SUBAcon: [endoplasmic reticulum,cytosol,plasma membrane]
SUBAcon: [endoplasmic reticulum,cytosol,plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.