CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

nucleus 2
mitochondrion 2
cytosol 1
plasma membrane 2

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
KRG95976
KRH05126
KRH19856
KRH32464
KRH67682

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT2G24762.1	KRG95976	AT3G09770.1	22291198
AT2G24762.1	KRH05126	AT3G09770.1	22291198
AT2G24762.1	KRH19856	AT3G09770.1	22291198
AT2G24762.1	KRH32464	AT3G09770.1	22291198
AT2G24762.1	KRH67682	AT3G09770.1	22291198
AT2G24762.1	KRG95976	AT5G03200.1	22291198
AT2G24762.1	KRH05126	AT5G03200.1	22291198
AT2G24762.1	KRH19856	AT5G03200.1	22291198
AT2G24762.1	KRH32464	AT5G03200.1	22291198
AT2G24762.1	KRH67682	AT5G03200.1	22291198
AT4G25760.1	KRG95976	AT3G09770.1	22291198
AT4G25760.1	KRH05126	AT3G09770.1	22291198
AT4G25760.1	KRH19856	AT3G09770.1	22291198
AT4G25760.1	KRH32464	AT3G09770.1	22291198
AT4G25760.1	KRH67682	AT3G09770.1	22291198
AT4G25760.1	KRG95976	AT3G53410.1	22291198
AT4G25760.1	KRH05126	AT3G53410.1	22291198
AT4G25760.1	KRH19856	AT3G53410.1	22291198
AT4G25760.1	KRH32464	AT3G53410.1	22291198
AT4G25760.1	KRH67682	AT3G53410.1	22291198
AT4G25760.1	KRG95976	AT5G03200.1	22291198
AT4G25760.1	KRH05126	AT5G03200.1	22291198
AT4G25760.1	KRH19856	AT5G03200.1	22291198
AT4G25760.1	KRH32464	AT5G03200.1	22291198
AT4G25760.1	KRH67682	AT5G03200.1	22291198
AT4G31730.1	KRG95976	AT3G09770.1	22291198
AT4G31730.1	KRH05126	AT3G09770.1	22291198
AT4G31730.1	KRH19856	AT3G09770.1	22291198
AT4G31730.1	KRH32464	AT3G09770.1	22291198
AT4G31730.1	KRH67682	AT3G09770.1	22291198
AT4G31730.1	KRG95976	AT3G09770.1	24036454
AT4G31730.1	KRH05126	AT3G09770.1	24036454
AT4G31730.1	KRH19856	AT3G09770.1	24036454
AT4G31730.1	KRH32464	AT3G09770.1	24036454
AT4G31730.1	KRH67682	AT3G09770.1	24036454
AT4G31730.1	KRG95976	AT5G03200.1	22291198
AT4G31730.1	KRH05126	AT5G03200.1	22291198
AT4G31730.1	KRH19856	AT5G03200.1	22291198
AT4G31730.1	KRH32464	AT5G03200.1	22291198
AT4G31730.1	KRH67682	AT5G03200.1	22291198
AT5G57685.1	KRG95976	AT3G09770.1	22291198
AT5G57685.1	KRH05126	AT3G09770.1	22291198
AT5G57685.1	KRH19856	AT3G09770.1	22291198
AT5G57685.1	KRH32464	AT3G09770.1	22291198
AT5G57685.1	KRH67682	AT3G09770.1	22291198
AT5G57685.1	KRG95976	AT3G53410.1	22291198
AT5G57685.1	KRH05126	AT3G53410.1	22291198
AT5G57685.1	KRH19856	AT3G53410.1	22291198
AT5G57685.1	KRH32464	AT3G53410.1	22291198
AT5G57685.1	KRH67682	AT3G53410.1	22291198
AT5G57685.1	KRG95976	AT5G03200.1	22291198
AT5G57685.1	KRH05126	AT5G03200.1	22291198
AT5G57685.1	KRH19856	AT5G03200.1	22291198
AT5G57685.1	KRH32464	AT5G03200.1	22291198
AT5G57685.1	KRH67682	AT5G03200.1	22291198

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH02920	Soybean	endoplasmic reticulum, nucleus, plasma membrane	52.56	75.0
Bra006808.1-P	Field mustard	plasma membrane	29.49	47.26
Bra002705.1-P	Field mustard	endoplasmic reticulum, mitochondrion, plasma membrane	27.78	44.22
Bra002707.1-P	Field mustard	endoplasmic reticulum, mitochondrion, plasma membrane	27.78	44.22
AT4G25760.1	Thale cress	cytosol, endoplasmic reticulum, plasma membrane	24.36	44.19
AT5G57685.1	Thale cress	cytosol, endoplasmic reticulum, plasma membrane	27.78	43.92
Bra013917.1-P	Field mustard	endoplasmic reticulum, mitochondrion, plasma membrane	25.21	42.75
CDY68098	Canola	endoplasmic reticulum, mitochondrion, plasma membrane	25.21	42.75
CDX94417	Canola	endoplasmic reticulum, mitochondrion, plasma membrane	25.21	42.75
GSMUA_Achr7P16360_001	Banana	endoplasmic reticulum, extracellular, plasma membrane	18.38	42.57
KRG93760	Soybean	plastid	19.23	42.45
KRH61627	Soybean	endoplasmic reticulum, plasma membrane, plastid	29.91	42.42
CDY13451	Canola	plasma membrane	23.5	42.31
Bra020422.1-P	Field mustard	endoplasmic reticulum, mitochondrion, plasma membrane	26.5	41.89
CDX92732	Canola	plasma membrane	23.93	41.48
TraesCS4B01G081100.1	Wheat	endoplasmic reticulum, extracellular, plasma membrane	28.21	40.99
KRH52294	Soybean	plastid	28.63	40.61
Bra019142.1-P	Field mustard	endoplasmic reticulum, mitochondrion, plasma membrane	23.5	39.86
CDY72356	Canola	endoplasmic reticulum, mitochondrion, plasma membrane	23.5	39.86
VIT_04s0008g07370.t01	Wine grape	plastid	29.06	39.77
Zm00001d036703_P001	Maize	endoplasmic reticulum, extracellular, plasma membrane	24.36	39.31
Zm00001d032115_P001	Maize	extracellular, golgi, plasma membrane	29.06	38.2
KRH01450	Soybean	endoplasmic reticulum, plasma membrane, plastid	17.95	38.18
GSMUA_Achr11P...	Banana	extracellular, golgi, mitochondrion, plastid	24.79	38.16
CDY34757	Canola	endoplasmic reticulum, nucleus, plasma membrane	24.36	38.0
AT4G31730.1	Thale cress	endoplasmic reticulum, plasma membrane, plastid	25.64	37.97
TraesCS4A01G234200.1	Wheat	endoplasmic reticulum, extracellular, plasma membrane	27.35	37.65
KRH45165	Soybean	endoplasmic reticulum, plasma membrane, plastid	18.8	37.61
EES13936	Sorghum	endoplasmic reticulum, extracellular, plasma membrane	28.21	37.29
Zm00001d053729_P001	Maize	plastid	23.08	37.24
CDX72326	Canola	endoplasmic reticulum, mitochondrion, plasma membrane	26.07	37.2
GSMUA_Achr7P05080_001	Banana	endoplasmic reticulum, plasma membrane, plastid	23.5	36.91
Bra011294.1-P	Field mustard	mitochondrion	26.07	36.75
CDX76795	Canola	golgi, mitochondrion, plastid	23.5	36.67
Bra023987.1-P	Field mustard	endoplasmic reticulum, mitochondrion, plasma membrane, plastid	25.64	36.59
AT2G24762.1	Thale cress	golgi, plasma membrane, plastid	24.36	36.54
Zm00001d050079_P001	Maize	extracellular, golgi, plasma membrane	29.49	36.32
GSMUA_Achr10P...	Banana	golgi, plasma membrane, plastid	26.07	36.31
TraesCS4D01G079800.1	Wheat	endoplasmic reticulum, extracellular, plasma membrane	25.21	36.2
Os08t0446800-01	Rice	endoplasmic reticulum, extracellular, plasma membrane	27.78	36.11
Bra007834.1-P	Field mustard	golgi, mitochondrion, plasma membrane	23.08	36.0
KRH45164	Soybean	plastid	19.23	35.71
Os06t0654400-00	Rice	endoplasmic reticulum, nucleus, plasma membrane	27.78	35.33
CDX68780	Canola	mitochondrion	24.79	34.94
HORVU4Hr1G013760.1	Barley	golgi, mitochondrion, plasma membrane, plastid	27.78	34.57
KRH01448	Soybean	plastid	17.95	34.15
GSMUA_Achr1P23400_001	Banana	cytosol, mitochondrion, plasma membrane	22.65	33.76
HORVU7Hr1G111310.2	Barley	endoplasmic reticulum, mitochondrion, plasma membrane	26.07	33.7
Zm00001d046927_P001	Maize	endoplasmic reticulum, mitochondrion, plasma membrane	26.5	33.7
KRH05332	Soybean	plastid	23.93	31.82
EES13610	Sorghum	plastid	24.36	31.49
EER90144	Sorghum	endoplasmic reticulum, plasma membrane, plastid	26.07	31.44
KRH15701	Soybean	plastid	24.36	31.32
TraesCS7A01G498100.1	Wheat	endoplasmic reticulum	25.21	31.22
EER88756	Sorghum	endoplasmic reticulum, extracellular, plasma membrane	25.64	31.09
TraesCS6D01G140800.1	Wheat	endoplasmic reticulum, extracellular, plasma membrane	22.22	30.59
Bra020423.1-P	Field mustard	cytosol	14.1	30.28
TraesCS7B01G405000.1	Wheat	endoplasmic reticulum, mitochondrion, plasma membrane	26.07	30.05
TraesCS6A01G150800.1	Wheat	endoplasmic reticulum, extracellular, plasma membrane	21.37	29.94
TraesCS7D01G485400.1	Wheat	golgi, mitochondrion, plasma membrane	26.07	29.9
TraesCS6B01G178900.1	Wheat	endoplasmic reticulum, extracellular, plasma membrane	21.79	29.65
TraesCS7A01G497800.1	Wheat	endoplasmic reticulum, nucleus, plasma membrane	26.07	29.61
TraesCS7D01G485100.1	Wheat	endoplasmic reticulum, nucleus, peroxisome	25.64	29.41
HORVU6Hr1G030050.2	Barley	peroxisome, vacuole	23.08	29.19
TraesCS7D01G485300.1	Wheat	endoplasmic reticulum, nucleus, plasma membrane	26.92	29.17
TraesCS7A01G497900.1	Wheat	endoplasmic reticulum	26.07	28.24
TraesCS7B01G404900.1	Wheat	endoplasmic reticulum, nucleus, plasma membrane	26.07	28.24
Zm00001d015470_P001	Maize	plastid	23.5	28.21
HORVU1Hr1G003070.1	Barley	endoplasmic reticulum, peroxisome, plastid	25.64	28.17
HORVU7Hr1G111320.1	Barley	endoplasmic reticulum, peroxisome, plastid	25.64	28.17
HORVU1Hr1G003060.2	Barley	endoplasmic reticulum, mitochondrion, plasma membrane	25.64	28.04
EES06373	Sorghum	endoplasmic reticulum, nucleus, plasma membrane, plastid	23.93	27.72
Os08t0249200-00	Rice	plastid	23.08	27.41
HORVU7Hr1G111350.1	Barley	endoplasmic reticulum, nucleus, plasma membrane	25.21	27.19
HORVU1Hr1G003080.1	Barley	endoplasmic reticulum, nucleus, plasma membrane	25.21	27.19
Zm00001d024198_P001	Maize	plastid	20.09	26.86
TraesCS7D01G485200.1	Wheat	vacuole	24.36	26.76
TraesCS7A01G498000.1	Wheat	endoplasmic reticulum, mitochondrion, plasma membrane	22.22	26.13
TraesCS7B01G404600.1	Wheat	endoplasmic reticulum	25.21	25.99
HORVU0Hr1G022370.1	Barley	mitochondrion	26.07	24.7
TraesCS7B01G404700.1	Wheat	cytosol, endoplasmic reticulum, plastid	26.07	23.19

Protein Annotations

EMBL:ACUP02008154	EnsemblPlants:KRH18976	EnsemblPlantsGene:GLYMA_13G093500	GO:GO:0005575	GO:GO:0016020	GO:GO:0016021
PANTHER:PTHR33228	PANTHER:PTHR33228:SF5	ProteinID:KRH18976	ProteinID:KRH18976.1	SEG:seg	TMHMM:TMhelix
UniParc:UPI000294FD44	UniProt:K7LWX0	MapMan:35.2	:	:	:

Description

hypothetical protein

Coordinates

chr13:+:20872060..20874105

Molecular Weight (calculated)

25541.2 Da

IEP (calculated)

6.224

GRAVY (calculated)

-0.375

Length

234 amino acids

Sequence
(BLAST)

001: MIILSSTGKL IKGRAHREEG GGSHCFFLLK KNDDTNHLSP HNQNLSINTF PPHHPPPNPI NLSLQFLLSI ILLCFSQSNM AAYREPMNMN MSDRAPVSPQ
101: QPHSPWHSPV PYLFGGLAAM LGLIAFALLI LACSYWKLSG YLEGNGETER DLEAGETEQD QKPAKPYEEK ILVIMAGQEK PTFLATPSVS SCSTSRSSSF
201: GDNTSTCTCE ENRKSLEMAQ AGTGTTETAH SSSD

Best Arabidopsis Sequence Match ( AT5G57685.1 )
(BLAST)

001: MEGRQYYPPR ENVEGNRTTM GGGPHSPWHS PVPYLFGGLA AMLGLIAFAL LILACSYWRL SGYLDGEENQ SRERDLEVGD VKPDKTAVKP VALPEKFLVI
101: MAGNVKPTYL ATPSVKTCTC DDDDDEDDDV EGSDQVVPRS SESNGETH

Arabidopsis Description

GDU3Protein GLUTAMINE DUMPER 3 [Source:UniProtKB/Swiss-Prot;Acc:Q9FHH5]
SUBAcon: [endoplasmic reticulum,cytosol,plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.