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Field mustard
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Field mustard
Subcellular Localization
min:
: max

 
Winner_takes_all: mitochondrion, endoplasmic reticulum, plasma membrane

Predictor Summary:
  • nucleus 2
  • mitochondrion 2
  • endoplasmic reticulum 2
  • plasma membrane 3
  • extracellular 1
  • vacuole 1
  • golgi 1
Predictors GFP MS/MS Papers
Winner Takes All:endoplasmic reticulum, mitochondrion, plasma membrane
Any Predictor:mitochondrion, nucleus, secretory
BaCelLo:nucleus
iPSORT:mitochondrion
MultiLoc:endoplasmic reticulum
Plant-mPloc:nucleus, plasma membrane
PProwler:secretory
WoLF PSORT:mitochondrion
YLoc:plasma membrane
PPI

Inferred distinct locusB in Crop

locusBlocations
Bra003133.1-P
Bra009546.1-P
Bra028846.1-P
Bra029788.1-P
Bra034086.1-P

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT4G25760.1 Bra029788.1-P AT3G09770.1 22291198
AT4G25760.1 Bra034086.1-P AT3G09770.1 22291198
AT4G25760.1 Bra003133.1-P AT3G53410.1 22291198
AT4G25760.1 Bra009546.1-P AT5G03200.1 22291198
AT4G25760.1 Bra028846.1-P AT5G03200.1 22291198
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY72356 Canola endoplasmic reticulum, mitochondrion, plasma membrane 99.28 99.28
Bra013917.1-P Field mustard endoplasmic reticulum, mitochondrion, plasma membrane 83.33 83.33
AT4G25760.1 Thale cress cytosol, endoplasmic reticulum, plasma membrane 66.67 71.32
Bra006808.1-P Field mustard plasma membrane 48.55 45.89
Bra002705.1-P Field mustard endoplasmic reticulum, mitochondrion, plasma membrane 47.83 44.9
Bra002707.1-P Field mustard endoplasmic reticulum, mitochondrion, plasma membrane 47.83 44.9
Bra020422.1-P Field mustard endoplasmic reticulum, mitochondrion, plasma membrane 46.38 43.24
Bra007834.1-P Field mustard golgi, mitochondrion, plasma membrane 40.58 37.33
TraesCS4B01G081100.1 Wheat endoplasmic reticulum, extracellular, plasma membrane 43.48 37.27
TraesCS4D01G079800.1 Wheat endoplasmic reticulum, extracellular, plasma membrane 43.48 36.81
GSMUA_Achr7P16360_001 Banana endoplasmic reticulum, extracellular, plasma membrane 26.81 36.63
KRH02920 Soybean endoplasmic reticulum, nucleus, plasma membrane 43.48 36.59
EES13936 Sorghum endoplasmic reticulum, extracellular, plasma membrane 45.65 35.59
GSMUA_Achr1P23400_001 Banana cytosol, mitochondrion, plasma membrane 39.86 35.03
Bra009804.1-P Field mustard extracellular 25.36 35.0
Bra020423.1-P Field mustard cytosol 27.54 34.86
TraesCS4A01G234200.1 Wheat endoplasmic reticulum, extracellular, plasma membrane 42.75 34.71
Zm00001d036703_P001 Maize endoplasmic reticulum, extracellular, plasma membrane 36.23 34.48
Os08t0446800-01 Rice endoplasmic reticulum, extracellular, plasma membrane 44.93 34.44
GSMUA_Achr7P05080_001 Banana endoplasmic reticulum, plasma membrane, plastid 36.96 34.23
GSMUA_Achr11P... Banana extracellular, golgi, mitochondrion, plastid 37.68 34.21
Bra011294.1-P Field mustard mitochondrion 40.58 33.73
Zm00001d032115_P001 Maize extracellular, golgi, plasma membrane 43.48 33.71
Bra023987.1-P Field mustard endoplasmic reticulum, mitochondrion, plasma membrane, plastid 39.13 32.93
HORVU4Hr1G013760.1 Barley golgi, mitochondrion, plasma membrane, plastid 44.2 32.45
Zm00001d053729_P001 Maize plastid 33.33 31.72
Zm00001d046927_P001 Maize endoplasmic reticulum, mitochondrion, plasma membrane 42.03 31.52
VIT_04s0008g07370.t01 Wine grape plastid 38.41 30.99
GSMUA_Achr10P... Banana golgi, plasma membrane, plastid 37.68 30.95
Zm00001d050079_P001 Maize extracellular, golgi, plasma membrane 41.3 30.0
EER88756 Sorghum endoplasmic reticulum, extracellular, plasma membrane 40.58 29.02
Os06t0654400-00 Rice endoplasmic reticulum, nucleus, plasma membrane 37.68 28.26
TraesCS7A01G498100.1 Wheat endoplasmic reticulum 38.41 28.04
HORVU7Hr1G111310.2 Barley endoplasmic reticulum, mitochondrion, plasma membrane 36.23 27.62
TraesCS6A01G150800.1 Wheat endoplasmic reticulum, extracellular, plasma membrane 33.33 27.54
EER90144 Sorghum endoplasmic reticulum, plasma membrane, plastid 38.41 27.32
TraesCS6B01G178900.1 Wheat endoplasmic reticulum, extracellular, plasma membrane 33.33 26.74
TraesCS7B01G405000.1 Wheat endoplasmic reticulum, mitochondrion, plasma membrane 38.41 26.11
TraesCS7D01G485400.1 Wheat golgi, mitochondrion, plasma membrane 38.41 25.98
TraesCS6D01G140800.1 Wheat endoplasmic reticulum, extracellular, plasma membrane 31.88 25.88
EES06373 Sorghum endoplasmic reticulum, nucleus, plasma membrane, plastid 37.68 25.74
HORVU6Hr1G030050.2 Barley peroxisome, vacuole 34.06 25.41
TraesCS7A01G497800.1 Wheat endoplasmic reticulum, nucleus, plasma membrane 37.68 25.24
Zm00001d015470_P001 Maize plastid 35.51 25.13
TraesCS7D01G485300.1 Wheat endoplasmic reticulum, nucleus, plasma membrane 39.13 25.0
TraesCS7D01G485100.1 Wheat endoplasmic reticulum, nucleus, peroxisome 36.96 25.0
TraesCS7A01G497900.1 Wheat endoplasmic reticulum 38.41 24.54
TraesCS7B01G404900.1 Wheat endoplasmic reticulum, nucleus, plasma membrane 38.41 24.54
TraesCS7D01G485200.1 Wheat vacuole 37.68 24.41
HORVU1Hr1G003060.2 Barley endoplasmic reticulum, mitochondrion, plasma membrane 37.68 24.3
TraesCS7A01G498000.1 Wheat endoplasmic reticulum, mitochondrion, plasma membrane 34.78 24.12
HORVU7Hr1G111350.1 Barley endoplasmic reticulum, nucleus, plasma membrane 37.68 23.96
HORVU1Hr1G003080.1 Barley endoplasmic reticulum, nucleus, plasma membrane 37.68 23.96
EES13610 Sorghum plastid 31.16 23.76
KRH18976 Soybean plasma membrane 39.86 23.5
HORVU1Hr1G003070.1 Barley endoplasmic reticulum, peroxisome, plastid 36.23 23.47
HORVU7Hr1G111320.1 Barley endoplasmic reticulum, peroxisome, plastid 36.23 23.47
Zm00001d024198_P001 Maize plastid 29.71 23.43
TraesCS7B01G404600.1 Wheat endoplasmic reticulum 37.68 22.91
Os08t0249200-00 Rice plastid 31.16 21.83
HORVU0Hr1G022370.1 Barley mitochondrion 35.51 19.84
TraesCS7B01G404700.1 Wheat cytosol, endoplasmic reticulum, plastid 37.68 19.77
Protein Annotations
EnsemblPlants:Bra019142.1EnsemblPlants:Bra019142.1-PEnsemblPlantsGene:Bra019142GO:GO:0005575GO:GO:0016020GO:GO:0016021
PANTHER:PTHR33228PANTHER:PTHR33228:SF5SEG:segTMHMM:TMhelixUniParc:UPI000254114EUniProt:M4DRJ9
MapMan:35.1:::::
Description
AT4G25760 (E=6e-041) ATGDU2, GDU2 | AtGDU2 (Arabidopsis thaliana GLUTAMINE DUMPER 2)
Coordinates
chrA03:+:26094035..26094451
Molecular Weight (calculated)
15246.9 Da
IEP (calculated)
5.512
GRAVY (calculated)
-0.454
Length
138 amino acids
Sequence
(BLAST)
001: MQTMEGRQYY KNHEGNNHSS SMVVPHSAWH SPVPYLFGGL AAMFALIAFA LLILACSYWR LSGSVERDLE DGEDGKSDGD THKERTTAMP EKFLVIMAGD
101: VKPTYLATPA NRSDYSCTCG DHKEEVASDQ VVRQNTGT
Best Arabidopsis Sequence Match ( AT4G25760.1 )
(BLAST)
001: MQTMEGRQYN YQDSINASSS MVVPHSPWHS PVPYLFGGLA AMLALICVAL LILACSYWRL SGSAERDLEA GDDAKPDNDT NKTKHTEMPE KFLVIMAGDV
101: RPTYLATPAT RSEQSCTCGD HNEEEGRRG
Arabidopsis Description
GDU2Protein GLUTAMINE DUMPER 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9SW07]
SUBAcon: [endoplasmic reticulum,cytosol,plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.