Factsheet for Bra020422.1-P

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane, endoplasmic reticulum, mitochondrion

Predictor Summary:

nucleus 2
endoplasmic reticulum 1
plastid 1
mitochondrion 2
plasma membrane 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
Bra003133.1-P
Bra009546.1-P
Bra028846.1-P
Bra029788.1-P
Bra034086.1-P

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G57685.1	Bra029788.1-P	AT3G09770.1	22291198
AT5G57685.1	Bra034086.1-P	AT3G09770.1	22291198
AT5G57685.1	Bra003133.1-P	AT3G53410.1	22291198
AT5G57685.1	Bra009546.1-P	AT5G03200.1	22291198
AT5G57685.1	Bra028846.1-P	AT5G03200.1	22291198

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra006808.1-P	Field mustard	plasma membrane	63.51	64.38
Bra002705.1-P	Field mustard	endoplasmic reticulum, mitochondrion, plasma membrane	62.84	63.27
Bra002707.1-P	Field mustard	endoplasmic reticulum, mitochondrion, plasma membrane	62.84	63.27
Bra020423.1-P	Field mustard	cytosol	43.24	58.72
AT5G57685.1	Thale cress	cytosol, endoplasmic reticulum, plasma membrane	58.11	58.11
Bra013917.1-P	Field mustard	endoplasmic reticulum, mitochondrion, plasma membrane	44.59	47.83
Bra019142.1-P	Field mustard	endoplasmic reticulum, mitochondrion, plasma membrane	43.24	46.38
GSMUA_Achr7P16360_001	Banana	endoplasmic reticulum, extracellular, plasma membrane	29.73	43.56
KRH02920	Soybean	endoplasmic reticulum, nucleus, plasma membrane	44.59	40.24
Bra009804.1-P	Field mustard	extracellular	25.68	38.0
Zm00001d036703_P001	Maize	endoplasmic reticulum, extracellular, plasma membrane	37.16	37.93
TraesCS4B01G081100.1	Wheat	endoplasmic reticulum, extracellular, plasma membrane	41.22	37.89
TraesCS4D01G079800.1	Wheat	endoplasmic reticulum, extracellular, plasma membrane	40.54	36.81
EES13936	Sorghum	endoplasmic reticulum, extracellular, plasma membrane	43.92	36.72
Zm00001d032115_P001	Maize	extracellular, golgi, plasma membrane	43.92	36.52
GSMUA_Achr1P23400_001	Banana	cytosol, mitochondrion, plasma membrane	38.51	36.31
Bra007834.1-P	Field mustard	golgi, mitochondrion, plasma membrane	36.49	36.0
GSMUA_Achr11P...	Banana	extracellular, golgi, mitochondrion, plastid	36.49	35.53
TraesCS4A01G234200.1	Wheat	endoplasmic reticulum, extracellular, plasma membrane	39.86	34.71
GSMUA_Achr10P...	Banana	golgi, plasma membrane, plastid	39.19	34.52
Os08t0446800-01	Rice	endoplasmic reticulum, extracellular, plasma membrane	41.89	34.44
Bra011294.1-P	Field mustard	mitochondrion	38.51	34.34
GSMUA_Achr7P05080_001	Banana	endoplasmic reticulum, plasma membrane, plastid	34.46	34.23
Bra023987.1-P	Field mustard	endoplasmic reticulum, mitochondrion, plasma membrane, plastid	37.84	34.15
VIT_04s0008g07370.t01	Wine grape	plastid	38.51	33.33
Os06t0654400-00	Rice	endoplasmic reticulum, nucleus, plasma membrane	41.22	33.15
Zm00001d053729_P001	Maize	plastid	32.43	33.1
Zm00001d050079_P001	Maize	extracellular, golgi, plasma membrane	41.89	32.63
HORVU4Hr1G013760.1	Barley	golgi, mitochondrion, plasma membrane, plastid	41.22	32.45
HORVU7Hr1G111310.2	Barley	endoplasmic reticulum, mitochondrion, plasma membrane	37.84	30.94
TraesCS7A01G498100.1	Wheat	endoplasmic reticulum	39.19	30.69
TraesCS7B01G405000.1	Wheat	endoplasmic reticulum, mitochondrion, plasma membrane	41.89	30.54
TraesCS7D01G485400.1	Wheat	golgi, mitochondrion, plasma membrane	41.22	29.9
EER90144	Sorghum	endoplasmic reticulum, plasma membrane, plastid	39.19	29.9
Zm00001d046927_P001	Maize	endoplasmic reticulum, mitochondrion, plasma membrane	37.16	29.89
EER88756	Sorghum	endoplasmic reticulum, extracellular, plasma membrane	37.84	29.02
EES06373	Sorghum	endoplasmic reticulum, nucleus, plasma membrane, plastid	39.19	28.71
TraesCS7D01G485300.1	Wheat	endoplasmic reticulum, nucleus, plasma membrane	41.22	28.24
HORVU1Hr1G003070.1	Barley	endoplasmic reticulum, peroxisome, plastid	40.54	28.17
HORVU7Hr1G111320.1	Barley	endoplasmic reticulum, peroxisome, plastid	40.54	28.17
TraesCS7D01G485100.1	Wheat	endoplasmic reticulum, nucleus, peroxisome	38.51	27.94
TraesCS7B01G404900.1	Wheat	endoplasmic reticulum, nucleus, plasma membrane	40.54	27.78
TraesCS7A01G497800.1	Wheat	endoplasmic reticulum, nucleus, plasma membrane	37.84	27.18
TraesCS6A01G150800.1	Wheat	endoplasmic reticulum, extracellular, plasma membrane	30.41	26.95
TraesCS7D01G485200.1	Wheat	vacuole	38.51	26.76
TraesCS6B01G178900.1	Wheat	endoplasmic reticulum, extracellular, plasma membrane	31.08	26.74
HORVU1Hr1G003060.2	Barley	endoplasmic reticulum, mitochondrion, plasma membrane	38.51	26.64
KRH18976	Soybean	plasma membrane	41.89	26.5
TraesCS7B01G404600.1	Wheat	endoplasmic reticulum	40.54	26.43
TraesCS7A01G498000.1	Wheat	endoplasmic reticulum, mitochondrion, plasma membrane	35.14	26.13
EES13610	Sorghum	plastid	31.76	25.97
TraesCS7A01G497900.1	Wheat	endoplasmic reticulum	37.84	25.93
Os08t0249200-00	Rice	plastid	34.46	25.89
TraesCS6D01G140800.1	Wheat	endoplasmic reticulum, extracellular, plasma membrane	29.73	25.88
HORVU6Hr1G030050.2	Barley	peroxisome, vacuole	31.08	24.86
Zm00001d024198_P001	Maize	plastid	29.05	24.57
HORVU7Hr1G111350.1	Barley	endoplasmic reticulum, nucleus, plasma membrane	35.81	24.42
HORVU1Hr1G003080.1	Barley	endoplasmic reticulum, nucleus, plasma membrane	35.81	24.42
Zm00001d015470_P001	Maize	plastid	31.08	23.59
HORVU0Hr1G022370.1	Barley	mitochondrion	37.84	22.67
TraesCS7B01G404700.1	Wheat	cytosol, endoplasmic reticulum, plastid	37.84	21.29

Protein Annotations

EnsemblPlants:Bra020422.1	EnsemblPlants:Bra020422.1-P	EnsemblPlantsGene:Bra020422	GO:GO:0005575	GO:GO:0016020	GO:GO:0016021
PANTHER:PTHR33228	PANTHER:PTHR33228:SF5	SEG:seg	TMHMM:TMhelix	UniParc:UPI0002545D13	UniProt:M4DV78
MapMan:35.1	:	:	:	:	:

Description

AT5G57685 (E=4e-049) AtGDU3 | AtGDU3 (Arabidopsis thaliana GLUTAMINE DUMPER 3)

Coordinates

chrA02:+:6670473..6670919

Molecular Weight (calculated)

16064.7 Da

IEP (calculated)

4.222

GRAVY (calculated)

-0.498

Length

148 amino acids

Sequence
(BLAST)

001: MEGRQYYPPR ETVDGNRTTM GGPHSPWHSP VPYLFGGLAA MLGLIAFALL ILGCSYWRLS GYFDGEENQS RDSDLEAGDM KPDTAVKAVA LPEKFLVIMA
101: GDVNPTYLAT PAEKSCTCDD DEDEEGGDDV KGNDQVVRRS TQSNGAAR

Best Arabidopsis Sequence Match ( AT5G57685.1 )
(BLAST)

001: MEGRQYYPPR ENVEGNRTTM GGGPHSPWHS PVPYLFGGLA AMLGLIAFAL LILACSYWRL SGYLDGEENQ SRERDLEVGD VKPDKTAVKP VALPEKFLVI
101: MAGNVKPTYL ATPSVKTCTC DDDDDEDDDV EGSDQVVPRS SESNGETH

Arabidopsis Description

GDU3Protein GLUTAMINE DUMPER 3 [Source:UniProtKB/Swiss-Prot;Acc:Q9FHH5]
SUBAcon: [cytosol,plasma membrane,endoplasmic reticulum]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.