Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion, endoplasmic reticulum, plasma membrane
Predictor Summary:
Predictor Summary:
- mitochondrion 2
- endoplasmic reticulum 2
- extracellular 1
- vacuole 1
- plasma membrane 2
- golgi 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS7A01G498100.1 | Wheat | endoplasmic reticulum | 53.77 | 56.61 |
| TraesCS7A01G497900.1 | Wheat | endoplasmic reticulum | 59.8 | 55.09 |
| TraesCS7A01G497800.1 | Wheat | endoplasmic reticulum, nucleus, plasma membrane | 55.78 | 53.88 |
| Zm00001d036703_P001 | Maize | endoplasmic reticulum, extracellular, plasma membrane | 38.69 | 53.1 |
| HORVU7Hr1G111320.1 | Barley | endoplasmic reticulum, peroxisome, plastid | 55.78 | 52.11 |
| HORVU1Hr1G003070.1 | Barley | endoplasmic reticulum, peroxisome, plastid | 55.78 | 52.11 |
| Os06t0654400-00 | Rice | endoplasmic reticulum, nucleus, plasma membrane | 41.71 | 45.11 |
| EER90144 | Sorghum | endoplasmic reticulum, plasma membrane, plastid | 43.22 | 44.33 |
| EER88756 | Sorghum | endoplasmic reticulum, extracellular, plasma membrane | 41.21 | 42.49 |
| Zm00001d046927_P001 | Maize | endoplasmic reticulum, mitochondrion, plasma membrane | 39.2 | 42.39 |
| TraesCS6A01G150800.1 | Wheat | endoplasmic reticulum, extracellular, plasma membrane | 34.67 | 41.32 |
| GSMUA_Achr7P16360_001 | Banana | endoplasmic reticulum, extracellular, plasma membrane | 20.6 | 40.59 |
| AT4G25760.1 | Thale cress | cytosol, endoplasmic reticulum, plasma membrane | 24.12 | 37.21 |
| TraesCS4A01G234200.1 | Wheat | endoplasmic reticulum, extracellular, plasma membrane | 31.66 | 37.06 |
| Bra007834.1-P | Field mustard | golgi, mitochondrion, plasma membrane | 27.14 | 36.0 |
| Bra006808.1-P | Field mustard | plasma membrane | 26.13 | 35.62 |
| CDX68780 | Canola | mitochondrion | 29.65 | 35.54 |
| CDY13451 | Canola | plasma membrane | 23.12 | 35.38 |
| Bra002707.1-P | Field mustard | endoplasmic reticulum, mitochondrion, plasma membrane | 26.13 | 35.37 |
| Bra002705.1-P | Field mustard | endoplasmic reticulum, mitochondrion, plasma membrane | 26.13 | 35.37 |
| CDX76795 | Canola | golgi, mitochondrion, plastid | 26.63 | 35.33 |
| Bra020422.1-P | Field mustard | endoplasmic reticulum, mitochondrion, plasma membrane | 26.13 | 35.14 |
| CDX92732 | Canola | plasma membrane | 23.62 | 34.81 |
| CDY72356 | Canola | endoplasmic reticulum, mitochondrion, plasma membrane | 24.12 | 34.78 |
| Bra019142.1-P | Field mustard | endoplasmic reticulum, mitochondrion, plasma membrane | 24.12 | 34.78 |
| CDY34757 | Canola | endoplasmic reticulum, nucleus, plasma membrane | 26.13 | 34.67 |
| CDX94417 | Canola | endoplasmic reticulum, mitochondrion, plasma membrane | 23.62 | 34.06 |
| CDY68098 | Canola | endoplasmic reticulum, mitochondrion, plasma membrane | 23.62 | 34.06 |
| Bra013917.1-P | Field mustard | endoplasmic reticulum, mitochondrion, plasma membrane | 23.62 | 34.06 |
| AT2G24762.1 | Thale cress | golgi, plasma membrane, plastid | 26.63 | 33.97 |
| VIT_04s0008g07370.t01 | Wine grape | plastid | 29.15 | 33.92 |
| Solyc12g096480.1.1 | Tomato | plastid | 25.63 | 33.55 |
| AT5G57685.1 | Thale cress | cytosol, endoplasmic reticulum, plasma membrane | 24.62 | 33.11 |
| PGSC0003DMT400067619 | Potato | mitochondrion | 30.15 | 32.97 |
| KRH02920 | Soybean | endoplasmic reticulum, nucleus, plasma membrane | 27.14 | 32.93 |
| AT4G31730.1 | Thale cress | endoplasmic reticulum, plasma membrane, plastid | 25.63 | 32.28 |
| PGSC0003DMT400075273 | Potato | cytosol, endoplasmic reticulum, plasma membrane, plastid | 23.62 | 31.13 |
| Solyc08g006520.1.1 | Tomato | cytosol, endoplasmic reticulum, plasma membrane, plastid | 27.64 | 30.9 |
| Bra011294.1-P | Field mustard | mitochondrion | 25.63 | 30.72 |
| CDX72326 | Canola | endoplasmic reticulum, mitochondrion, plasma membrane | 25.13 | 30.49 |
| Bra023987.1-P | Field mustard | endoplasmic reticulum, mitochondrion, plasma membrane, plastid | 24.62 | 29.88 |
| Solyc12g096490.1.1 | Tomato | endoplasmic reticulum, plasma membrane, plastid | 24.12 | 29.27 |
| PGSC0003DMT400075274 | Potato | plastid | 22.61 | 28.66 |
| Bra020423.1-P | Field mustard | cytosol | 12.56 | 22.94 |
| KRH18976 | Soybean | plasma membrane | 26.13 | 22.22 |
Protein Annotations
| EnsemblPlants:TraesCS7A01G498000.1 | EnsemblPlantsGene:TraesCS7A01G498000 | PANTHER:PTHR33228 | PANTHER:PTHR33228:SF17 | SEG:seg | TMHMM:TMhelix |
| MapMan:35.2 | : | : | : | : | : |
Description
No Description!
Coordinates
chr7A:-:688651868..688652467
Molecular Weight (calculated)
20810.1 Da
IEP (calculated)
5.223
GRAVY (calculated)
-0.333
Length
199 amino acids
Sequence
(BLAST)
(BLAST)
001: MRPGAEFVTM SHRAGAPMTA PAHELVNGIA APHSPWQSPV PCLFGGMAAM LGLIALALLS LACSYWKLSG YLDDDREGQA VGDADGEKGS VSGASKPALD
101: FLEDVVVIMA GDERPTFVTK PAASRAAEVE FATAAAPASA SAVNRQEKKM DEVSSQLGGD STNAASRSRS HQDAASQSRD HHHHDHESSS TTAQQESLQ
101: FLEDVVVIMA GDERPTFVTK PAASRAAEVE FATAAAPASA SAVNRQEKKM DEVSSQLGGD STNAASRSRS HQDAASQSRD HHHHDHESSS TTAQQESLQ
001: MEGRQYYPPR ENVEGNRTTM GGGPHSPWHS PVPYLFGGLA AMLGLIAFAL LILACSYWRL SGYLDGEENQ SRERDLEVGD VKPDKTAVKP VALPEKFLVI
101: MAGNVKPTYL ATPSVKTCTC DDDDDEDDDV EGSDQVVPRS SESNGETH
101: MAGNVKPTYL ATPSVKTCTC DDDDDEDDDV EGSDQVVPRS SESNGETH
Arabidopsis Description
GDU3Protein GLUTAMINE DUMPER 3 [Source:UniProtKB/Swiss-Prot;Acc:Q9FHH5]
SUBAcon: [endoplasmic reticulum,cytosol,plasma membrane]
SUBAcon: [endoplasmic reticulum,cytosol,plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.