Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- plastid 1
- mitochondrion 4
- golgi 2
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 2
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra011294.1-P | Field mustard | mitochondrion | 59.64 | 59.64 |
| CDY13451 | Canola | plasma membrane | 43.37 | 55.38 |
| AT4G31730.1 | Thale cress | endoplasmic reticulum, plasma membrane, plastid | 50.6 | 53.16 |
| CDX72326 | Canola | endoplasmic reticulum, mitochondrion, plasma membrane | 50.0 | 50.61 |
| Zm00001d036703_P001 | Maize | endoplasmic reticulum, extracellular, plasma membrane | 37.35 | 42.76 |
| CDX76795 | Canola | golgi, mitochondrion, plastid | 38.55 | 42.67 |
| CDX92732 | Canola | plasma membrane | 34.34 | 42.22 |
| CDY34757 | Canola | endoplasmic reticulum, nucleus, plasma membrane | 37.35 | 41.33 |
| CDX80475 | Canola | cytosol, endoplasmic reticulum, plasma membrane | 33.13 | 40.15 |
| CDY72356 | Canola | endoplasmic reticulum, mitochondrion, plasma membrane | 33.13 | 39.86 |
| CDX94417 | Canola | endoplasmic reticulum, mitochondrion, plasma membrane | 32.53 | 39.13 |
| GSMUA_Achr7P16360_001 | Banana | endoplasmic reticulum, extracellular, plasma membrane | 23.49 | 38.61 |
| CDY68098 | Canola | endoplasmic reticulum, mitochondrion, plasma membrane | 31.93 | 38.41 |
| GSMUA_Achr11P... | Banana | extracellular, golgi, mitochondrion, plastid | 34.94 | 38.16 |
| TraesCS4A01G234200.1 | Wheat | endoplasmic reticulum, extracellular, plasma membrane | 38.55 | 37.65 |
| KRH02920 | Soybean | endoplasmic reticulum, nucleus, plasma membrane | 36.75 | 37.2 |
| TraesCS4D01G079800.1 | Wheat | endoplasmic reticulum, extracellular, plasma membrane | 34.94 | 35.58 |
| Zm00001d053729_P001 | Maize | plastid | 30.12 | 34.48 |
| GSMUA_Achr1P23400_001 | Banana | cytosol, mitochondrion, plasma membrane | 31.93 | 33.76 |
| GSMUA_Achr7P05080_001 | Banana | endoplasmic reticulum, plasma membrane, plastid | 30.12 | 33.56 |
| EES13936 | Sorghum | endoplasmic reticulum, extracellular, plasma membrane | 34.94 | 32.77 |
| VIT_04s0008g07370.t01 | Wine grape | plastid | 33.73 | 32.75 |
| TraesCS6A01G150800.1 | Wheat | endoplasmic reticulum, extracellular, plasma membrane | 32.53 | 32.34 |
| GSMUA_Achr10P... | Banana | golgi, plasma membrane, plastid | 32.53 | 32.14 |
| TraesCS7A01G498100.1 | Wheat | endoplasmic reticulum | 36.14 | 31.75 |
| TraesCS4B01G081100.1 | Wheat | endoplasmic reticulum, extracellular, plasma membrane | 30.72 | 31.68 |
| EER88756 | Sorghum | endoplasmic reticulum, extracellular, plasma membrane | 36.75 | 31.61 |
| Zm00001d032115_P001 | Maize | extracellular, golgi, plasma membrane | 33.73 | 31.46 |
| TraesCS6B01G178900.1 | Wheat | endoplasmic reticulum, extracellular, plasma membrane | 32.53 | 31.4 |
| TraesCS7A01G497800.1 | Wheat | endoplasmic reticulum, nucleus, plasma membrane | 38.55 | 31.07 |
| Zm00001d050079_P001 | Maize | extracellular, golgi, plasma membrane | 35.54 | 31.05 |
| HORVU7Hr1G111310.2 | Barley | endoplasmic reticulum, mitochondrion, plasma membrane | 33.73 | 30.94 |
| Os08t0446800-01 | Rice | endoplasmic reticulum, extracellular, plasma membrane | 33.13 | 30.56 |
| TraesCS7A01G497900.1 | Wheat | endoplasmic reticulum | 39.76 | 30.56 |
| Zm00001d046927_P001 | Maize | endoplasmic reticulum, mitochondrion, plasma membrane | 33.73 | 30.43 |
| EER90144 | Sorghum | endoplasmic reticulum, plasma membrane, plastid | 35.54 | 30.41 |
| HORVU6Hr1G030050.2 | Barley | peroxisome, vacuole | 33.73 | 30.27 |
| TraesCS7B01G404900.1 | Wheat | endoplasmic reticulum, nucleus, plasma membrane | 39.16 | 30.09 |
| HORVU1Hr1G003070.1 | Barley | endoplasmic reticulum, peroxisome, plastid | 38.55 | 30.05 |
| TraesCS7D01G485200.1 | Wheat | vacuole | 38.55 | 30.05 |
| HORVU7Hr1G111320.1 | Barley | endoplasmic reticulum, peroxisome, plastid | 38.55 | 30.05 |
| Os06t0654400-00 | Rice | endoplasmic reticulum, nucleus, plasma membrane | 33.13 | 29.89 |
| TraesCS7A01G498000.1 | Wheat | endoplasmic reticulum, mitochondrion, plasma membrane | 35.54 | 29.65 |
| HORVU1Hr1G003060.2 | Barley | endoplasmic reticulum, mitochondrion, plasma membrane | 37.95 | 29.44 |
| TraesCS6D01G140800.1 | Wheat | endoplasmic reticulum, extracellular, plasma membrane | 30.12 | 29.41 |
| TraesCS7D01G485400.1 | Wheat | golgi, mitochondrion, plasma membrane | 36.14 | 29.41 |
| HORVU7Hr1G111350.1 | Barley | endoplasmic reticulum, nucleus, plasma membrane | 37.95 | 29.03 |
| HORVU1Hr1G003080.1 | Barley | endoplasmic reticulum, nucleus, plasma membrane | 37.95 | 29.03 |
| TraesCS7D01G485300.1 | Wheat | endoplasmic reticulum, nucleus, plasma membrane | 36.75 | 28.24 |
| EES13610 | Sorghum | plastid | 30.72 | 28.18 |
| TraesCS7B01G405000.1 | Wheat | endoplasmic reticulum, mitochondrion, plasma membrane | 34.34 | 28.08 |
| TraesCS7D01G485100.1 | Wheat | endoplasmic reticulum, nucleus, peroxisome | 34.34 | 27.94 |
| HORVU4Hr1G013760.1 | Barley | golgi, mitochondrion, plasma membrane, plastid | 30.72 | 27.13 |
| Zm00001d024198_P001 | Maize | plastid | 28.31 | 26.86 |
| Os08t0249200-00 | Rice | plastid | 30.72 | 25.89 |
| EES06373 | Sorghum | endoplasmic reticulum, nucleus, plasma membrane, plastid | 31.33 | 25.74 |
| TraesCS7B01G404600.1 | Wheat | endoplasmic reticulum | 34.34 | 25.11 |
| KRH18976 | Soybean | plasma membrane | 34.94 | 24.79 |
| HORVU0Hr1G022370.1 | Barley | mitochondrion | 34.94 | 23.48 |
| TraesCS7B01G404700.1 | Wheat | cytosol, endoplasmic reticulum, plastid | 35.54 | 22.43 |
| Zm00001d015470_P001 | Maize | plastid | 25.3 | 21.54 |
Protein Annotations
| MapMan:35.1 | GO:A0A078BVG4 | EnsemblPlants:CDX68780 | ProteinID:CDX68780 | ProteinID:CDX68780.1 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006521 | GO:GO:0006810 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009987 | GO:GO:0010585 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0080143 |
| EnsemblPlantsGene:GSBRNA2T00130489001 | PANTHER:PTHR33228 | PANTHER:PTHR33228:SF5 | TMHMM:TMhelix | UniParc:UPI0004EB35B4 | SEG:seg |
Description
BnaC01g06730D
Coordinates
chrLK031789:+:1236836..1237385
Molecular Weight (calculated)
17952.3 Da
IEP (calculated)
5.311
GRAVY (calculated)
-0.414
Length
166 amino acids
Sequence
(BLAST)
(BLAST)
001: MRPLSVRSML QEVAMHTTSA SPSSSVIHRA APQSPWHSPI PYLFGGLAAM IGLIAFALLI LACSYWRLSP SGEEDGRNGG AEDEEKESRS GDKAENGAYE
101: EKFLVIMAGE NMPRFIATPA MKKCTCGAHE GKMVVSQEDK VVAGEEKKLG ENEEKVKDTG EPTTSH
101: EKFLVIMAGE NMPRFIATPA MKKCTCGAHE GKMVVSQEDK VVAGEEKKLG ENEEKVKDTG EPTTSH
001: MRPLSVQSKF EDVATSTSVN HHGVTPQSPW HSPVPYLFGG LAAMLGLIAF ALLILACSYW RLSSSGEEDG QNVDEEKESR SGDKAANGAY EEKFLVIMAG
101: EDLPRYLATP AMKKCTCGGH EGKMVISQEE SVAKEEEKMR EGEEEKVKDT GETTTTSH
101: EDLPRYLATP AMKKCTCGGH EGKMVISQEE SVAKEEEKMR EGEEEKVKDT GETTTTSH
Arabidopsis Description
GDU1Protein GLUTAMINE DUMPER 1 [Source:UniProtKB/Swiss-Prot;Acc:O81775]
SUBAcon: [endoplasmic reticulum,plastid,plasma membrane]
SUBAcon: [endoplasmic reticulum,plastid,plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.