Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane, golgi, extracellular
Predictor Summary:
Predictor Summary:
- extracellular 4
- endoplasmic reticulum 3
- vacuole 3
- plasma membrane 4
- golgi 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| Zm00001d015671_P001 | |
| Zm00001d028475_P002 |
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| EES13936 | Sorghum | endoplasmic reticulum, extracellular, plasma membrane | 55.79 | 59.89 |
| Zm00001d032115_P001 | Maize | extracellular, golgi, plasma membrane | 55.26 | 58.99 |
| Os08t0446800-01 | Rice | endoplasmic reticulum, extracellular, plasma membrane | 52.63 | 55.56 |
| TraesCS4A01G234200.1 | Wheat | endoplasmic reticulum, extracellular, plasma membrane | 47.89 | 53.53 |
| TraesCS4B01G081100.1 | Wheat | endoplasmic reticulum, extracellular, plasma membrane | 45.26 | 53.42 |
| TraesCS4D01G079800.1 | Wheat | endoplasmic reticulum, extracellular, plasma membrane | 43.68 | 50.92 |
| Zm00001d036703_P001 | Maize | endoplasmic reticulum, extracellular, plasma membrane | 35.79 | 46.9 |
| GSMUA_Achr11P... | Banana | extracellular, golgi, mitochondrion, plastid | 36.84 | 46.05 |
| HORVU4Hr1G013760.1 | Barley | golgi, mitochondrion, plasma membrane, plastid | 44.74 | 45.21 |
| AT4G25760.1 | Thale cress | cytosol, endoplasmic reticulum, plasma membrane | 30.0 | 44.19 |
| AT5G57685.1 | Thale cress | cytosol, endoplasmic reticulum, plasma membrane | 33.16 | 42.57 |
| Bra006808.1-P | Field mustard | plasma membrane | 32.63 | 42.47 |
| Bra002707.1-P | Field mustard | endoplasmic reticulum, mitochondrion, plasma membrane | 32.63 | 42.18 |
| Bra002705.1-P | Field mustard | endoplasmic reticulum, mitochondrion, plasma membrane | 32.63 | 42.18 |
| Bra020422.1-P | Field mustard | endoplasmic reticulum, mitochondrion, plasma membrane | 32.63 | 41.89 |
| CDY13451 | Canola | plasma membrane | 28.42 | 41.54 |
| Zm00001d053729_P001 | Maize | plastid | 31.58 | 41.38 |
| CDX94417 | Canola | endoplasmic reticulum, mitochondrion, plasma membrane | 30.0 | 41.3 |
| CDY68098 | Canola | endoplasmic reticulum, mitochondrion, plasma membrane | 30.0 | 41.3 |
| CDY72356 | Canola | endoplasmic reticulum, mitochondrion, plasma membrane | 30.0 | 41.3 |
| Bra013917.1-P | Field mustard | endoplasmic reticulum, mitochondrion, plasma membrane | 30.0 | 41.3 |
| Bra019142.1-P | Field mustard | endoplasmic reticulum, mitochondrion, plasma membrane | 30.0 | 41.3 |
| KRH02920 | Soybean | endoplasmic reticulum, nucleus, plasma membrane | 35.26 | 40.85 |
| CDY34757 | Canola | endoplasmic reticulum, nucleus, plasma membrane | 32.11 | 40.67 |
| Bra007834.1-P | Field mustard | golgi, mitochondrion, plasma membrane | 32.11 | 40.67 |
| VIT_04s0008g07370.t01 | Wine grape | plastid | 36.32 | 40.35 |
| CDX92732 | Canola | plasma membrane | 28.42 | 40.0 |
| CDX76795 | Canola | golgi, mitochondrion, plastid | 31.05 | 39.33 |
| Zm00001d046927_P001 | Maize | endoplasmic reticulum, mitochondrion, plasma membrane | 37.37 | 38.59 |
| PGSC0003DMT400075273 | Potato | cytosol, endoplasmic reticulum, plasma membrane, plastid | 30.53 | 38.41 |
| AT2G24762.1 | Thale cress | golgi, plasma membrane, plastid | 31.05 | 37.82 |
| Solyc12g096480.1.1 | Tomato | plastid | 29.47 | 36.84 |
| AT4G31730.1 | Thale cress | endoplasmic reticulum, plasma membrane, plastid | 30.0 | 36.08 |
| CDX72326 | Canola | endoplasmic reticulum, mitochondrion, plasma membrane | 31.05 | 35.98 |
| PGSC0003DMT400067619 | Potato | mitochondrion | 34.21 | 35.71 |
| CDX68780 | Canola | mitochondrion | 31.05 | 35.54 |
| Solyc08g006520.1.1 | Tomato | cytosol, endoplasmic reticulum, plasma membrane, plastid | 33.16 | 35.39 |
| Bra023987.1-P | Field mustard | endoplasmic reticulum, mitochondrion, plasma membrane, plastid | 30.53 | 35.37 |
| Bra011294.1-P | Field mustard | mitochondrion | 30.53 | 34.94 |
| Solyc12g096490.1.1 | Tomato | endoplasmic reticulum, plasma membrane, plastid | 30.0 | 34.76 |
| Zm00001d024198_P001 | Maize | plastid | 31.58 | 34.29 |
| PGSC0003DMT400075274 | Potato | plastid | 26.84 | 32.48 |
| Zm00001d015470_P001 | Maize | plastid | 33.16 | 32.31 |
| KRH18976 | Soybean | plasma membrane | 36.32 | 29.49 |
| Bra020423.1-P | Field mustard | cytosol | 16.84 | 29.36 |
Protein Annotations
| EnsemblPlants:Zm00001d050079_P001 | EnsemblPlants:Zm00001d050079_T001 | EnsemblPlantsGene:Zm00001d050079 | GO:GO:0005575 | GO:GO:0016020 | GO:GO:0016021 |
| PANTHER:PTHR33228 | PANTHER:PTHR33228:SF5 | ProteinID:AQK51876.1 | SEG:seg | TMHMM:TMhelix | UniParc:UPI0008457BE6 |
| UniProt:A0A1D6PZN2 | MapMan:35.2 | : | : | : | : |
Description
Protein GLUTAMINE DUMPER 5
Coordinates
chr4:+:64642353..64642925
Molecular Weight (calculated)
18935.1 Da
IEP (calculated)
4.717
GRAVY (calculated)
-0.151
Length
190 amino acids
Sequence
(BLAST)
(BLAST)
001: MRPGAGFNAA AAAAKAAAVA PAVAGSAAAH SAWHSPVPYL FGGLAAMLGL IALALLILAC SYWKLSGYLE GGAAGRGGED GSGAGAGAGG GTKPAAGLPP
101: PVWEEKILVI MAGDAKPTYL ATPMSSRASS FGGDRSSSKG VDDEEEESNK EVQADEAAVA SVMDAGGQNG GEHSERRREG GDQERRIPEV
101: PVWEEKILVI MAGDAKPTYL ATPMSSRASS FGGDRSSSKG VDDEEEESNK EVQADEAAVA SVMDAGGQNG GEHSERRREG GDQERRIPEV
001: MEGRQYYPPR ENVEGNRTTM GGGPHSPWHS PVPYLFGGLA AMLGLIAFAL LILACSYWRL SGYLDGEENQ SRERDLEVGD VKPDKTAVKP VALPEKFLVI
101: MAGNVKPTYL ATPSVKTCTC DDDDDEDDDV EGSDQVVPRS SESNGETH
101: MAGNVKPTYL ATPSVKTCTC DDDDDEDDDV EGSDQVVPRS SESNGETH
Arabidopsis Description
GDU3Protein GLUTAMINE DUMPER 3 [Source:UniProtKB/Swiss-Prot;Acc:Q9FHH5]
SUBAcon: [endoplasmic reticulum,cytosol,plasma membrane]
SUBAcon: [endoplasmic reticulum,cytosol,plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.