Factsheet for Zm00001d015470_P001

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 4
endoplasmic reticulum 3
extracellular 1
vacuole 1
plasma membrane 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	plastid, secretory
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	endoplasmic reticulum
Predotar:	plastid
PProwler:	secretory
WoLF PSORT:	endoplasmic reticulum
YLoc:	plastid

PPI

Inferred distinct locusB in Crop

locusB	locations
Zm00001d015671_P001
Zm00001d028475_P002

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT2G24762.1	Zm00001d015671_P001	AT3G09770.1	22291198
AT2G24762.1	Zm00001d028475_P002	AT3G09770.1	22291198
AT2G24762.1	Zm00001d015671_P001	AT5G03200.1	22291198
AT2G24762.1	Zm00001d028475_P002	AT5G03200.1	22291198
AT4G25760.1	Zm00001d015671_P001	AT3G09770.1	22291198
AT4G25760.1	Zm00001d028475_P002	AT3G09770.1	22291198
AT4G25760.1	Zm00001d015671_P001	AT3G53410.1	22291198
AT4G25760.1	Zm00001d028475_P002	AT3G53410.1	22291198
AT4G25760.1	Zm00001d015671_P001	AT5G03200.1	22291198
AT4G25760.1	Zm00001d028475_P002	AT5G03200.1	22291198
AT4G31730.1	Zm00001d015671_P001	AT3G09770.1	22291198
AT4G31730.1	Zm00001d028475_P002	AT3G09770.1	22291198
AT4G31730.1	Zm00001d015671_P001	AT3G09770.1	24036454
AT4G31730.1	Zm00001d028475_P002	AT3G09770.1	24036454
AT4G31730.1	Zm00001d015671_P001	AT5G03200.1	22291198
AT4G31730.1	Zm00001d028475_P002	AT5G03200.1	22291198
AT5G57685.1	Zm00001d015671_P001	AT3G09770.1	22291198
AT5G57685.1	Zm00001d028475_P002	AT3G09770.1	22291198
AT5G57685.1	Zm00001d015671_P001	AT3G53410.1	22291198
AT5G57685.1	Zm00001d028475_P002	AT3G53410.1	22291198
AT5G57685.1	Zm00001d015671_P001	AT5G03200.1	22291198
AT5G57685.1	Zm00001d028475_P002	AT5G03200.1	22291198

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EES06373	Sorghum	endoplasmic reticulum, nucleus, plasma membrane, plastid	45.13	43.56
Zm00001d036703_P001	Maize	endoplasmic reticulum, extracellular, plasma membrane	30.77	41.38
Zm00001d053729_P001	Maize	plastid	29.23	39.31
TraesCS6B01G178900.1	Wheat	endoplasmic reticulum, extracellular, plasma membrane	32.82	37.21
CDY13451	Canola	plasma membrane	24.62	36.92
KRH02920	Soybean	endoplasmic reticulum, nucleus, plasma membrane	30.26	35.98
TraesCS6A01G150800.1	Wheat	endoplasmic reticulum, extracellular, plasma membrane	30.77	35.93
CDY72356	Canola	endoplasmic reticulum, mitochondrion, plasma membrane	25.13	35.51
Bra019142.1-P	Field mustard	endoplasmic reticulum, mitochondrion, plasma membrane	25.13	35.51
Zm00001d046927_P001	Maize	endoplasmic reticulum, mitochondrion, plasma membrane	33.33	35.33
Zm00001d032115_P001	Maize	extracellular, golgi, plasma membrane	31.79	34.83
GSMUA_Achr7P16360_001	Banana	endoplasmic reticulum, extracellular, plasma membrane	17.95	34.65
CDX92732	Canola	plasma membrane	23.59	34.07
TraesCS6D01G140800.1	Wheat	endoplasmic reticulum, extracellular, plasma membrane	29.23	33.53
AT4G25760.1	Thale cress	cytosol, endoplasmic reticulum, plasma membrane	22.05	33.33
Zm00001d050079_P001	Maize	extracellular, golgi, plasma membrane	32.31	33.16
HORVU7Hr1G111310.2	Barley	endoplasmic reticulum, mitochondrion, plasma membrane	30.77	33.15
TraesCS7A01G498100.1	Wheat	endoplasmic reticulum	31.79	32.8
CDX94417	Canola	endoplasmic reticulum, mitochondrion, plasma membrane	23.08	32.61
CDY68098	Canola	endoplasmic reticulum, mitochondrion, plasma membrane	23.08	32.61
Bra013917.1-P	Field mustard	endoplasmic reticulum, mitochondrion, plasma membrane	23.08	32.61
PGSC0003DMT400075273	Potato	cytosol, endoplasmic reticulum, plasma membrane, plastid	25.13	32.45
Bra002707.1-P	Field mustard	endoplasmic reticulum, mitochondrion, plasma membrane	24.1	31.97
Bra002705.1-P	Field mustard	endoplasmic reticulum, mitochondrion, plasma membrane	24.1	31.97
AT2G24762.1	Thale cress	golgi, plasma membrane, plastid	25.13	31.41
HORVU6Hr1G030050.2	Barley	peroxisome, vacuole	29.74	31.35
Bra020422.1-P	Field mustard	endoplasmic reticulum, mitochondrion, plasma membrane	23.59	31.08
AT5G57685.1	Thale cress	cytosol, endoplasmic reticulum, plasma membrane	23.59	31.08
Solyc12g096480.1.1	Tomato	plastid	24.1	30.92
CDY34757	Canola	endoplasmic reticulum, nucleus, plasma membrane	23.59	30.67
TraesCS7B01G405000.1	Wheat	endoplasmic reticulum, mitochondrion, plasma membrane	31.79	30.54
Solyc12g096490.1.1	Tomato	endoplasmic reticulum, plasma membrane, plastid	25.64	30.49
AT4G31730.1	Thale cress	endoplasmic reticulum, plasma membrane, plastid	24.62	30.38
Bra006808.1-P	Field mustard	plasma membrane	22.56	30.14
TraesCS7D01G485400.1	Wheat	golgi, mitochondrion, plasma membrane	31.28	29.9
Bra023987.1-P	Field mustard	endoplasmic reticulum, mitochondrion, plasma membrane, plastid	25.13	29.88
Solyc08g006520.1.1	Tomato	cytosol, endoplasmic reticulum, plasma membrane, plastid	27.18	29.78
CDX72326	Canola	endoplasmic reticulum, mitochondrion, plasma membrane	24.62	29.27
CDX76795	Canola	golgi, mitochondrion, plastid	22.05	28.67
VIT_04s0008g07370.t01	Wine grape	plastid	25.13	28.66
PGSC0003DMT400067619	Potato	mitochondrion	26.15	28.02
Bra007834.1-P	Field mustard	golgi, mitochondrion, plasma membrane	21.54	28.0
Bra011294.1-P	Field mustard	mitochondrion	23.59	27.71
Zm00001d024198_P001	Maize	plastid	24.1	26.86
PGSC0003DMT400075274	Potato	plastid	21.54	26.75
HORVU0Hr1G022370.1	Barley	mitochondrion	32.31	25.51
CDX68780	Canola	mitochondrion	21.54	25.3
KRH18976	Soybean	plasma membrane	28.21	23.5
Bra020423.1-P	Field mustard	cytosol	11.79	21.1

Protein Annotations

EnsemblPlants:Zm00001d015470_P001	EnsemblPlants:Zm00001d015470_T001	EnsemblPlantsGene:Zm00001d015470	GO:GO:0005575	GO:GO:0016020	GO:GO:0016021
PANTHER:PTHR33228	PANTHER:PTHR33228:SF17	ProteinID:AQK68993.1	SEG:seg	TMHMM:TMhelix	UniParc:UPI0008443652
UniProt:A0A1D6H2A6	MapMan:35.2	:	:	:	:

Description

GDU1

Coordinates

chr5:-:91982760..91983347

Molecular Weight (calculated)

19472.5 Da

IEP (calculated)

5.266

GRAVY (calculated)

-0.368

Length

195 amino acids

Sequence
(BLAST)

001: MGVGVAGTAG MSHGPAAPSP RSSSTMPAAG QSPVPYLFGA LAAMLGLIAL SLLALACSYW KLSGGGQEAY DDDDPERQAG AGAGAEARPG HGKAAPTGKG
101: TGERWREHAV VIMAGHERPT FLATPASSRR GPNGARGVGV SVDSGPGDSE DGDEARCVEC GARSWPARAA DSEGEPGRTE QSGASGSSVT VISER

Best Arabidopsis Sequence Match ( AT4G31730.1 )
(BLAST)

001: MRPLSVQSKF EDVATSTSVN HHGVTPQSPW HSPVPYLFGG LAAMLGLIAF ALLILACSYW RLSSSGEEDG QNVDEEKESR SGDKAANGAY EEKFLVIMAG
101: EDLPRYLATP AMKKCTCGGH EGKMVISQEE SVAKEEEKMR EGEEEKVKDT GETTTTSH

Arabidopsis Description

GDU1Protein GLUTAMINE DUMPER 1 [Source:UniProtKB/Swiss-Prot;Acc:O81775]
SUBAcon: [endoplasmic reticulum,plastid,plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.