Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion, plasma membrane, golgi
Predictor Summary:
Predictor Summary:
- mitochondrion 2
- golgi 2
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 2
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS7A01G498100.1 | Wheat | endoplasmic reticulum | 70.1 | 75.66 |
| TraesCS7B01G405000.1 | Wheat | endoplasmic reticulum, mitochondrion, plasma membrane | 69.12 | 69.46 |
| HORVU7Hr1G111310.2 | Barley | endoplasmic reticulum, mitochondrion, plasma membrane | 59.31 | 66.85 |
| HORVU0Hr1G022370.1 | Barley | mitochondrion | 58.82 | 48.58 |
| TraesCS7D01G485100.1 | Wheat | endoplasmic reticulum, nucleus, peroxisome | 45.59 | 45.59 |
| GSMUA_Achr7P16360_001 | Banana | endoplasmic reticulum, extracellular, plasma membrane | 22.55 | 45.54 |
| TraesCS7D01G485200.1 | Wheat | vacuole | 47.55 | 45.54 |
| TraesCS7D01G485300.1 | Wheat | endoplasmic reticulum, nucleus, plasma membrane | 47.55 | 44.91 |
| TraesCS4D01G079800.1 | Wheat | endoplasmic reticulum, extracellular, plasma membrane | 33.82 | 42.33 |
| TraesCS6D01G140800.1 | Wheat | endoplasmic reticulum, extracellular, plasma membrane | 34.8 | 41.76 |
| Bra020422.1-P | Field mustard | endoplasmic reticulum, mitochondrion, plasma membrane | 29.9 | 41.22 |
| AT4G25760.1 | Thale cress | cytosol, endoplasmic reticulum, plasma membrane | 25.98 | 41.09 |
| VIT_04s0008g07370.t01 | Wine grape | plastid | 34.31 | 40.94 |
| CDY13451 | Canola | plasma membrane | 25.98 | 40.77 |
| Bra006808.1-P | Field mustard | plasma membrane | 28.43 | 39.73 |
| Bra002707.1-P | Field mustard | endoplasmic reticulum, mitochondrion, plasma membrane | 28.43 | 39.46 |
| Bra002705.1-P | Field mustard | endoplasmic reticulum, mitochondrion, plasma membrane | 28.43 | 39.46 |
| Bra013917.1-P | Field mustard | endoplasmic reticulum, mitochondrion, plasma membrane | 26.47 | 39.13 |
| CDY68098 | Canola | endoplasmic reticulum, mitochondrion, plasma membrane | 26.47 | 39.13 |
| CDX92732 | Canola | plasma membrane | 25.49 | 38.52 |
| AT5G57685.1 | Thale cress | cytosol, endoplasmic reticulum, plasma membrane | 27.94 | 38.51 |
| CDY72356 | Canola | endoplasmic reticulum, mitochondrion, plasma membrane | 25.98 | 38.41 |
| CDX94417 | Canola | endoplasmic reticulum, mitochondrion, plasma membrane | 25.98 | 38.41 |
| Bra019142.1-P | Field mustard | endoplasmic reticulum, mitochondrion, plasma membrane | 25.98 | 38.41 |
| AT4G31730.1 | Thale cress | endoplasmic reticulum, plasma membrane, plastid | 29.41 | 37.97 |
| AT2G24762.1 | Thale cress | golgi, plasma membrane, plastid | 28.92 | 37.82 |
| KRH02920 | Soybean | endoplasmic reticulum, nucleus, plasma membrane | 30.39 | 37.8 |
| EES06373 | Sorghum | endoplasmic reticulum, nucleus, plasma membrane, plastid | 37.25 | 37.62 |
| PGSC0003DMT400067619 | Potato | mitochondrion | 33.33 | 37.36 |
| CDY34757 | Canola | endoplasmic reticulum, nucleus, plasma membrane | 27.45 | 37.33 |
| Zm00001d053729_P001 | Maize | plastid | 25.98 | 36.55 |
| Solyc08g006520.1.1 | Tomato | cytosol, endoplasmic reticulum, plasma membrane, plastid | 31.86 | 36.52 |
| CDX68780 | Canola | mitochondrion | 29.41 | 36.14 |
| Bra007834.1-P | Field mustard | golgi, mitochondrion, plasma membrane | 25.98 | 35.33 |
| PGSC0003DMT400075273 | Potato | cytosol, endoplasmic reticulum, plasma membrane, plastid | 25.98 | 35.1 |
| CDX76795 | Canola | golgi, mitochondrion, plastid | 25.49 | 34.67 |
| CDX72326 | Canola | endoplasmic reticulum, mitochondrion, plasma membrane | 26.47 | 32.93 |
| Solyc12g096480.1.1 | Tomato | plastid | 24.51 | 32.89 |
| Bra011294.1-P | Field mustard | mitochondrion | 26.47 | 32.53 |
| Solyc12g096490.1.1 | Tomato | endoplasmic reticulum, plasma membrane, plastid | 25.98 | 32.32 |
| Bra023987.1-P | Field mustard | endoplasmic reticulum, mitochondrion, plasma membrane, plastid | 25.98 | 32.32 |
| Zm00001d015470_P001 | Maize | plastid | 29.9 | 31.28 |
| PGSC0003DMT400075274 | Potato | plastid | 22.06 | 28.66 |
| KRH18976 | Soybean | plasma membrane | 29.9 | 26.07 |
| Bra020423.1-P | Field mustard | cytosol | 12.75 | 23.85 |
Protein Annotations
| EnsemblPlants:TraesCS7D01G485400.1 | EnsemblPlantsGene:TraesCS7D01G485400 | PANTHER:PTHR33228 | PANTHER:PTHR33228:SF17 | SEG:seg | TMHMM:TMhelix |
| MapMan:35.2 | : | : | : | : | : |
Description
No Description!
Coordinates
chr7D:-:595668328..595669137
Molecular Weight (calculated)
20893.1 Da
IEP (calculated)
4.648
GRAVY (calculated)
-0.215
Length
204 amino acids
Sequence
(BLAST)
(BLAST)
001: MRPGAEFVAM SHRVGAPMVA PAHGLINGTA PHSPWQSPVP YLFGGLAAML GLIAFALLIL ACSYWKLSGY LDGDRDGQAA EGDGEKAAAS GASKPASDFQ
101: EHVVVIMAGD ERPTFLAKPA TSRAAEVELA AAAEAAAVAS ASAVDGPEKK VDEQGCEVNS QLGGDPADAA SGSSGHQDAA SQSRDHHHHD HESSSTAELQ
201: ESLQ
101: EHVVVIMAGD ERPTFLAKPA TSRAAEVELA AAAEAAAVAS ASAVDGPEKK VDEQGCEVNS QLGGDPADAA SGSSGHQDAA SQSRDHHHHD HESSSTAELQ
201: ESLQ
001: MEGRQYYPPR ENVEGNRTTM GGGPHSPWHS PVPYLFGGLA AMLGLIAFAL LILACSYWRL SGYLDGEENQ SRERDLEVGD VKPDKTAVKP VALPEKFLVI
101: MAGNVKPTYL ATPSVKTCTC DDDDDEDDDV EGSDQVVPRS SESNGETH
101: MAGNVKPTYL ATPSVKTCTC DDDDDEDDDV EGSDQVVPRS SESNGETH
Arabidopsis Description
GDU3Protein GLUTAMINE DUMPER 3 [Source:UniProtKB/Swiss-Prot;Acc:Q9FHH5]
SUBAcon: [endoplasmic reticulum,cytosol,plasma membrane]
SUBAcon: [endoplasmic reticulum,cytosol,plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.