Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion, endoplasmic reticulum, plasma membrane
Predictor Summary:
Predictor Summary:
- nucleus 1
- mitochondrion 2
- endoplasmic reticulum 2
- extracellular 1
- vacuole 1
- plasma membrane 2
- golgi 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra019142.1-P | Field mustard | endoplasmic reticulum, mitochondrion, plasma membrane | 99.28 | 99.28 |
| CDX92732 | Canola | plasma membrane | 92.03 | 94.07 |
| CDX94417 | Canola | endoplasmic reticulum, mitochondrion, plasma membrane | 83.33 | 83.33 |
| CDY68098 | Canola | endoplasmic reticulum, mitochondrion, plasma membrane | 82.61 | 82.61 |
| AT4G25760.1 | Thale cress | cytosol, endoplasmic reticulum, plasma membrane | 67.39 | 72.09 |
| CDY13451 | Canola | plasma membrane | 38.41 | 40.77 |
| TraesCS4B01G081100.1 | Wheat | endoplasmic reticulum, extracellular, plasma membrane | 43.48 | 37.27 |
| TraesCS4D01G079800.1 | Wheat | endoplasmic reticulum, extracellular, plasma membrane | 43.48 | 36.81 |
| CDY34757 | Canola | endoplasmic reticulum, nucleus, plasma membrane | 39.86 | 36.67 |
| GSMUA_Achr7P16360_001 | Banana | endoplasmic reticulum, extracellular, plasma membrane | 26.81 | 36.63 |
| KRH02920 | Soybean | endoplasmic reticulum, nucleus, plasma membrane | 43.48 | 36.59 |
| CDX76795 | Canola | golgi, mitochondrion, plastid | 39.13 | 36.0 |
| EES13936 | Sorghum | endoplasmic reticulum, extracellular, plasma membrane | 45.65 | 35.59 |
| CDX80475 | Canola | cytosol, endoplasmic reticulum, plasma membrane | 34.78 | 35.04 |
| GSMUA_Achr1P23400_001 | Banana | cytosol, mitochondrion, plasma membrane | 39.86 | 35.03 |
| TraesCS4A01G234200.1 | Wheat | endoplasmic reticulum, extracellular, plasma membrane | 42.75 | 34.71 |
| Zm00001d036703_P001 | Maize | endoplasmic reticulum, extracellular, plasma membrane | 36.23 | 34.48 |
| Os08t0446800-01 | Rice | endoplasmic reticulum, extracellular, plasma membrane | 44.93 | 34.44 |
| GSMUA_Achr7P05080_001 | Banana | endoplasmic reticulum, plasma membrane, plastid | 36.96 | 34.23 |
| GSMUA_Achr11P... | Banana | extracellular, golgi, mitochondrion, plastid | 37.68 | 34.21 |
| Zm00001d032115_P001 | Maize | extracellular, golgi, plasma membrane | 43.48 | 33.71 |
| CDX72326 | Canola | endoplasmic reticulum, mitochondrion, plasma membrane | 39.86 | 33.54 |
| CDX68780 | Canola | mitochondrion | 39.86 | 33.13 |
| HORVU4Hr1G013760.1 | Barley | golgi, mitochondrion, plasma membrane, plastid | 44.2 | 32.45 |
| Zm00001d046927_P001 | Maize | endoplasmic reticulum, mitochondrion, plasma membrane | 42.03 | 31.52 |
| Zm00001d053729_P001 | Maize | plastid | 32.61 | 31.03 |
| VIT_04s0008g07370.t01 | Wine grape | plastid | 38.41 | 30.99 |
| GSMUA_Achr10P... | Banana | golgi, plasma membrane, plastid | 37.68 | 30.95 |
| Zm00001d050079_P001 | Maize | extracellular, golgi, plasma membrane | 41.3 | 30.0 |
| EER88756 | Sorghum | endoplasmic reticulum, extracellular, plasma membrane | 40.58 | 29.02 |
| Os06t0654400-00 | Rice | endoplasmic reticulum, nucleus, plasma membrane | 37.68 | 28.26 |
| TraesCS7A01G498100.1 | Wheat | endoplasmic reticulum | 38.41 | 28.04 |
| HORVU7Hr1G111310.2 | Barley | endoplasmic reticulum, mitochondrion, plasma membrane | 36.23 | 27.62 |
| TraesCS6A01G150800.1 | Wheat | endoplasmic reticulum, extracellular, plasma membrane | 33.33 | 27.54 |
| EER90144 | Sorghum | endoplasmic reticulum, plasma membrane, plastid | 38.41 | 27.32 |
| TraesCS6B01G178900.1 | Wheat | endoplasmic reticulum, extracellular, plasma membrane | 33.33 | 26.74 |
| TraesCS7B01G405000.1 | Wheat | endoplasmic reticulum, mitochondrion, plasma membrane | 38.41 | 26.11 |
| TraesCS7D01G485400.1 | Wheat | golgi, mitochondrion, plasma membrane | 38.41 | 25.98 |
| TraesCS6D01G140800.1 | Wheat | endoplasmic reticulum, extracellular, plasma membrane | 31.88 | 25.88 |
| EES06373 | Sorghum | endoplasmic reticulum, nucleus, plasma membrane, plastid | 37.68 | 25.74 |
| HORVU6Hr1G030050.2 | Barley | peroxisome, vacuole | 34.06 | 25.41 |
| TraesCS7A01G497800.1 | Wheat | endoplasmic reticulum, nucleus, plasma membrane | 37.68 | 25.24 |
| Zm00001d015470_P001 | Maize | plastid | 35.51 | 25.13 |
| TraesCS7D01G485300.1 | Wheat | endoplasmic reticulum, nucleus, plasma membrane | 39.13 | 25.0 |
| TraesCS7D01G485100.1 | Wheat | endoplasmic reticulum, nucleus, peroxisome | 36.96 | 25.0 |
| TraesCS7B01G404900.1 | Wheat | endoplasmic reticulum, nucleus, plasma membrane | 38.41 | 24.54 |
| TraesCS7A01G497900.1 | Wheat | endoplasmic reticulum | 38.41 | 24.54 |
| TraesCS7D01G485200.1 | Wheat | vacuole | 37.68 | 24.41 |
| HORVU1Hr1G003060.2 | Barley | endoplasmic reticulum, mitochondrion, plasma membrane | 37.68 | 24.3 |
| TraesCS7A01G498000.1 | Wheat | endoplasmic reticulum, mitochondrion, plasma membrane | 34.78 | 24.12 |
| HORVU1Hr1G003080.1 | Barley | endoplasmic reticulum, nucleus, plasma membrane | 37.68 | 23.96 |
| HORVU7Hr1G111350.1 | Barley | endoplasmic reticulum, nucleus, plasma membrane | 37.68 | 23.96 |
| EES13610 | Sorghum | plastid | 31.16 | 23.76 |
| KRH18976 | Soybean | plasma membrane | 39.86 | 23.5 |
| HORVU7Hr1G111320.1 | Barley | endoplasmic reticulum, peroxisome, plastid | 36.23 | 23.47 |
| HORVU1Hr1G003070.1 | Barley | endoplasmic reticulum, peroxisome, plastid | 36.23 | 23.47 |
| Zm00001d024198_P001 | Maize | plastid | 29.71 | 23.43 |
| TraesCS7B01G404600.1 | Wheat | endoplasmic reticulum | 37.68 | 22.91 |
| Os08t0249200-00 | Rice | plastid | 31.16 | 21.83 |
| HORVU0Hr1G022370.1 | Barley | mitochondrion | 35.51 | 19.84 |
| TraesCS7B01G404700.1 | Wheat | cytosol, endoplasmic reticulum, plastid | 37.68 | 19.77 |
Protein Annotations
| EnsemblPlants:CDY72356 | EnsemblPlantsGene:GSBRNA2T00027968001 | GO:A0A078K3L8 | GO:GO:0005575 | GO:GO:0016020 | GO:GO:0016021 |
| PANTHER:PTHR33228 | PANTHER:PTHR33228:SF5 | ProteinID:CDY72356 | ProteinID:CDY72356.1 | SEG:seg | TMHMM:TMhelix |
| UniParc:UPI0004EE8159 | UniProt:A0A078K3L8 | MapMan:35.1 | : | : | : |
Description
BnaAnng40800DBnaAnng40800D protein [Source:UniProtKB/TrEMBL;Acc:A0A078K3L8]
Coordinates
chrLK050448:-:1469..1885
Molecular Weight (calculated)
15218.8 Da
IEP (calculated)
5.512
GRAVY (calculated)
-0.471
Length
138 amino acids
Sequence
(BLAST)
(BLAST)
001: MQTMEGRQYY KNHEGNNHSS SMVVPHSAWH SPVPYLFGGL AAMFALIAFA LLILACSYWR LSGSAERDLE DGEDGKSDGD THKERTTAMP EKFLVIMAGD
101: VKPTYLATPA NRSDYSCTCG DHKEEVASDQ VVRQNTGT
101: VKPTYLATPA NRSDYSCTCG DHKEEVASDQ VVRQNTGT
001: MQTMEGRQYN YQDSINASSS MVVPHSPWHS PVPYLFGGLA AMLALICVAL LILACSYWRL SGSAERDLEA GDDAKPDNDT NKTKHTEMPE KFLVIMAGDV
101: RPTYLATPAT RSEQSCTCGD HNEEEGRRG
101: RPTYLATPAT RSEQSCTCGD HNEEEGRRG
Arabidopsis Description
GDU2Protein GLUTAMINE DUMPER 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9SW07]
SUBAcon: [endoplasmic reticulum,cytosol,plasma membrane]
SUBAcon: [endoplasmic reticulum,cytosol,plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.