Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion, endoplasmic reticulum, plasma membrane
Predictor Summary:
Predictor Summary:
- nucleus 1
- mitochondrion 2
- endoplasmic reticulum 2
- extracellular 1
- vacuole 1
- plasma membrane 2
- golgi 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS7A01G498100.1 | Wheat | endoplasmic reticulum | 66.01 | 70.9 |
| HORVU7Hr1G111310.2 | Barley | endoplasmic reticulum, mitochondrion, plasma membrane | 62.56 | 70.17 |
| TraesCS7D01G485400.1 | Wheat | golgi, mitochondrion, plasma membrane | 69.46 | 69.12 |
| HORVU0Hr1G022370.1 | Barley | mitochondrion | 61.58 | 50.61 |
| TraesCS7B01G404900.1 | Wheat | endoplasmic reticulum, nucleus, plasma membrane | 52.71 | 49.54 |
| GSMUA_Achr7P16360_001 | Banana | endoplasmic reticulum, extracellular, plasma membrane | 22.17 | 44.55 |
| CDY13451 | Canola | plasma membrane | 27.09 | 42.31 |
| Bra020422.1-P | Field mustard | endoplasmic reticulum, mitochondrion, plasma membrane | 30.54 | 41.89 |
| TraesCS7B01G404600.1 | Wheat | endoplasmic reticulum | 46.8 | 41.85 |
| TraesCS6B01G178900.1 | Wheat | endoplasmic reticulum, extracellular, plasma membrane | 34.98 | 41.28 |
| AT4G25760.1 | Thale cress | cytosol, endoplasmic reticulum, plasma membrane | 26.11 | 41.09 |
| Bra002707.1-P | Field mustard | endoplasmic reticulum, mitochondrion, plasma membrane | 29.56 | 40.82 |
| Bra002705.1-P | Field mustard | endoplasmic reticulum, mitochondrion, plasma membrane | 29.56 | 40.82 |
| VIT_04s0008g07370.t01 | Wine grape | plastid | 33.99 | 40.35 |
| AT4G31730.1 | Thale cress | endoplasmic reticulum, plasma membrane, plastid | 31.03 | 39.87 |
| TraesCS4B01G081100.1 | Wheat | endoplasmic reticulum, extracellular, plasma membrane | 31.53 | 39.75 |
| Bra006808.1-P | Field mustard | plasma membrane | 28.57 | 39.73 |
| AT5G57685.1 | Thale cress | cytosol, endoplasmic reticulum, plasma membrane | 28.57 | 39.19 |
| TraesCS7B01G404700.1 | Wheat | cytosol, endoplasmic reticulum, plastid | 50.74 | 39.16 |
| Bra013917.1-P | Field mustard | endoplasmic reticulum, mitochondrion, plasma membrane | 26.6 | 39.13 |
| CDY68098 | Canola | endoplasmic reticulum, mitochondrion, plasma membrane | 26.6 | 39.13 |
| PGSC0003DMT400067619 | Potato | mitochondrion | 34.98 | 39.01 |
| CDY34757 | Canola | endoplasmic reticulum, nucleus, plasma membrane | 28.57 | 38.67 |
| CDX92732 | Canola | plasma membrane | 25.62 | 38.52 |
| CDY72356 | Canola | endoplasmic reticulum, mitochondrion, plasma membrane | 26.11 | 38.41 |
| Bra019142.1-P | Field mustard | endoplasmic reticulum, mitochondrion, plasma membrane | 26.11 | 38.41 |
| CDX94417 | Canola | endoplasmic reticulum, mitochondrion, plasma membrane | 26.11 | 38.41 |
| Zm00001d053729_P001 | Maize | plastid | 27.09 | 37.93 |
| AT2G24762.1 | Thale cress | golgi, plasma membrane, plastid | 29.06 | 37.82 |
| KRH02920 | Soybean | endoplasmic reticulum, nucleus, plasma membrane | 30.54 | 37.8 |
| Solyc08g006520.1.1 | Tomato | cytosol, endoplasmic reticulum, plasma membrane, plastid | 33.0 | 37.64 |
| EES06373 | Sorghum | endoplasmic reticulum, nucleus, plasma membrane, plastid | 36.95 | 37.13 |
| Bra007834.1-P | Field mustard | golgi, mitochondrion, plasma membrane | 27.09 | 36.67 |
| PGSC0003DMT400075273 | Potato | cytosol, endoplasmic reticulum, plasma membrane, plastid | 27.09 | 36.42 |
| CDX76795 | Canola | golgi, mitochondrion, plastid | 26.6 | 36.0 |
| CDX72326 | Canola | endoplasmic reticulum, mitochondrion, plasma membrane | 28.57 | 35.37 |
| Bra023987.1-P | Field mustard | endoplasmic reticulum, mitochondrion, plasma membrane, plastid | 28.08 | 34.76 |
| CDX68780 | Canola | mitochondrion | 28.08 | 34.34 |
| Solyc12g096480.1.1 | Tomato | plastid | 25.62 | 34.21 |
| Solyc12g096490.1.1 | Tomato | endoplasmic reticulum, plasma membrane, plastid | 26.6 | 32.93 |
| Bra011294.1-P | Field mustard | mitochondrion | 26.6 | 32.53 |
| Zm00001d015470_P001 | Maize | plastid | 30.54 | 31.79 |
| PGSC0003DMT400075274 | Potato | plastid | 22.66 | 29.3 |
| KRH18976 | Soybean | plasma membrane | 30.05 | 26.07 |
| Bra020423.1-P | Field mustard | cytosol | 13.79 | 25.69 |
Protein Annotations
| EnsemblPlants:TraesCS7B01G405000.1 | EnsemblPlantsGene:TraesCS7B01G405000 | PANTHER:PTHR33228 | PANTHER:PTHR33228:SF17 | SEG:seg | TMHMM:TMhelix |
| MapMan:35.2 | : | : | : | : | : |
Description
No Description!
Coordinates
chr7B:-:673220905..673221516
Molecular Weight (calculated)
20834.1 Da
IEP (calculated)
4.844
GRAVY (calculated)
-0.179
Length
203 amino acids
Sequence
(BLAST)
(BLAST)
001: MRPGAEFVTM SHRAGAPTVA PAHGLINGTT PHSPWQSPVP YLFGGLAAML GLIAFALLIL ACSYWKLSGY LDGDRDGQAA EGDGEKAAAS GASKPALDFQ
101: EHVVVIMAGD ERPTFLAKPA TSRANEVELA AAAAAAVASA SAVDVPEKKV DELGCEVNSQ LGGDPADAAS GSSGHQDAAS QSRDHHHHDH ESSSTTALQE
201: SLQ
101: EHVVVIMAGD ERPTFLAKPA TSRANEVELA AAAAAAVASA SAVDVPEKKV DELGCEVNSQ LGGDPADAAS GSSGHQDAAS QSRDHHHHDH ESSSTTALQE
201: SLQ
001: MRPLSVQSKF EDVATSTSVN HHGVTPQSPW HSPVPYLFGG LAAMLGLIAF ALLILACSYW RLSSSGEEDG QNVDEEKESR SGDKAANGAY EEKFLVIMAG
101: EDLPRYLATP AMKKCTCGGH EGKMVISQEE SVAKEEEKMR EGEEEKVKDT GETTTTSH
101: EDLPRYLATP AMKKCTCGGH EGKMVISQEE SVAKEEEKMR EGEEEKVKDT GETTTTSH
Arabidopsis Description
GDU1Protein GLUTAMINE DUMPER 1 [Source:UniProtKB/Swiss-Prot;Acc:O81775]
SUBAcon: [endoplasmic reticulum,plastid,plasma membrane]
SUBAcon: [endoplasmic reticulum,plastid,plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.