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Field mustard
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Field mustard
Subcellular Localization
min:
: max

 
Winner_takes_all: mitochondrion, endoplasmic reticulum, plasma membrane

Predictor Summary:
  • nucleus 1
  • endoplasmic reticulum 2
  • plastid 1
  • cytosol 1
  • extracellular 1
  • vacuole 1
  • plasma membrane 2
  • golgi 1
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:endoplasmic reticulum, mitochondrion, plasma membrane
Any Predictor:cytosol, mitochondrion, nucleus, plastid, secretory
BaCelLo:nucleus
MultiLoc:endoplasmic reticulum
Plant-mPloc:cytosol, plastid
PProwler:secretory
WoLF PSORT:mitochondrion
YLoc:plasma membrane
PPI

Inferred distinct locusB in Crop

locusBlocations
Bra003133.1-P
Bra009546.1-P
Bra028846.1-P
Bra029788.1-P
Bra034086.1-P

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT5G57685.1 Bra029788.1-P AT3G09770.1 22291198
AT5G57685.1 Bra034086.1-P AT3G09770.1 22291198
AT5G57685.1 Bra003133.1-P AT3G53410.1 22291198
AT5G57685.1 Bra009546.1-P AT5G03200.1 22291198
AT5G57685.1 Bra028846.1-P AT5G03200.1 22291198
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra002707.1-P Field mustard endoplasmic reticulum, mitochondrion, plasma membrane 100.0 100.0
Bra006808.1-P Field mustard plasma membrane 75.51 76.03
AT5G57685.1 Thale cress cytosol, endoplasmic reticulum, plasma membrane 73.47 72.97
Bra020422.1-P Field mustard endoplasmic reticulum, mitochondrion, plasma membrane 63.27 62.84
Bra020423.1-P Field mustard cytosol 41.5 55.96
Bra013917.1-P Field mustard endoplasmic reticulum, mitochondrion, plasma membrane 45.58 48.55
GSMUA_Achr7P16360_001 Banana endoplasmic reticulum, extracellular, plasma membrane 33.33 48.51
Bra019142.1-P Field mustard endoplasmic reticulum, mitochondrion, plasma membrane 44.9 47.83
Bra009804.1-P Field mustard extracellular 29.25 43.0
TraesCS4B01G081100.1 Wheat endoplasmic reticulum, extracellular, plasma membrane 45.58 41.61
GSMUA_Achr11P... Banana extracellular, golgi, mitochondrion, plastid 42.18 40.79
GSMUA_Achr1P23400_001 Banana cytosol, mitochondrion, plasma membrane 41.5 38.85
TraesCS4D01G079800.1 Wheat endoplasmic reticulum, extracellular, plasma membrane 42.86 38.65
Zm00001d036703_P001 Maize endoplasmic reticulum, extracellular, plasma membrane 38.1 38.62
KRH02920 Soybean endoplasmic reticulum, nucleus, plasma membrane 42.86 38.41
TraesCS4A01G234200.1 Wheat endoplasmic reticulum, extracellular, plasma membrane 43.54 37.65
GSMUA_Achr7P05080_001 Banana endoplasmic reticulum, plasma membrane, plastid 37.41 36.91
EES13936 Sorghum endoplasmic reticulum, extracellular, plasma membrane 44.22 36.72
Bra007834.1-P Field mustard golgi, mitochondrion, plasma membrane 37.41 36.67
Os08t0446800-01 Rice endoplasmic reticulum, extracellular, plasma membrane 44.22 36.11
Bra023987.1-P Field mustard endoplasmic reticulum, mitochondrion, plasma membrane, plastid 40.14 35.98
Zm00001d032115_P001 Maize extracellular, golgi, plasma membrane 43.54 35.96
Bra011294.1-P Field mustard mitochondrion 40.14 35.54
GSMUA_Achr10P... Banana golgi, plasma membrane, plastid 40.14 35.12
HORVU4Hr1G013760.1 Barley golgi, mitochondrion, plasma membrane, plastid 44.9 35.11
Os06t0654400-00 Rice endoplasmic reticulum, nucleus, plasma membrane 42.86 34.24
Zm00001d053729_P001 Maize plastid 33.33 33.79
Zm00001d050079_P001 Maize extracellular, golgi, plasma membrane 42.18 32.63
HORVU7Hr1G111310.2 Barley endoplasmic reticulum, mitochondrion, plasma membrane 40.14 32.6
Zm00001d046927_P001 Maize endoplasmic reticulum, mitochondrion, plasma membrane 40.14 32.07
VIT_04s0008g07370.t01 Wine grape plastid 36.73 31.58
TraesCS7A01G498100.1 Wheat endoplasmic reticulum 40.14 31.22
EER88756 Sorghum endoplasmic reticulum, extracellular, plasma membrane 40.14 30.57
EER90144 Sorghum endoplasmic reticulum, plasma membrane, plastid 39.46 29.9
TraesCS7B01G405000.1 Wheat endoplasmic reticulum, mitochondrion, plasma membrane 40.82 29.56
TraesCS7D01G485300.1 Wheat endoplasmic reticulum, nucleus, plasma membrane 42.86 29.17
TraesCS6A01G150800.1 Wheat endoplasmic reticulum, extracellular, plasma membrane 32.65 28.74
TraesCS7D01G485400.1 Wheat golgi, mitochondrion, plasma membrane 39.46 28.43
TraesCS7D01G485100.1 Wheat endoplasmic reticulum, nucleus, peroxisome 39.46 28.43
HORVU7Hr1G111320.1 Barley endoplasmic reticulum, peroxisome, plastid 40.82 28.17
HORVU1Hr1G003070.1 Barley endoplasmic reticulum, peroxisome, plastid 40.82 28.17
TraesCS7A01G497800.1 Wheat endoplasmic reticulum, nucleus, plasma membrane 39.46 28.16
Zm00001d024198_P001 Maize plastid 33.33 28.0
TraesCS6B01G178900.1 Wheat endoplasmic reticulum, extracellular, plasma membrane 32.65 27.91
KRH18976 Soybean plasma membrane 44.22 27.78
TraesCS7B01G404900.1 Wheat endoplasmic reticulum, nucleus, plasma membrane 40.82 27.78
EES13610 Sorghum plastid 34.01 27.62
HORVU1Hr1G003060.2 Barley endoplasmic reticulum, mitochondrion, plasma membrane 40.14 27.57
TraesCS7D01G485200.1 Wheat vacuole 39.46 27.23
TraesCS6D01G140800.1 Wheat endoplasmic reticulum, extracellular, plasma membrane 31.29 27.06
TraesCS7B01G404600.1 Wheat endoplasmic reticulum 41.5 26.87
HORVU6Hr1G030050.2 Barley peroxisome, vacuole 33.33 26.49
Os08t0249200-00 Rice plastid 35.37 26.4
TraesCS7A01G497900.1 Wheat endoplasmic reticulum 38.78 26.39
TraesCS7A01G498000.1 Wheat endoplasmic reticulum, mitochondrion, plasma membrane 35.37 26.13
HORVU1Hr1G003080.1 Barley endoplasmic reticulum, nucleus, plasma membrane 36.73 24.88
HORVU7Hr1G111350.1 Barley endoplasmic reticulum, nucleus, plasma membrane 36.73 24.88
EES06373 Sorghum endoplasmic reticulum, nucleus, plasma membrane, plastid 34.01 24.75
Zm00001d015470_P001 Maize plastid 31.97 24.1
HORVU0Hr1G022370.1 Barley mitochondrion 38.78 23.08
TraesCS7B01G404700.1 Wheat cytosol, endoplasmic reticulum, plastid 38.1 21.29
Protein Annotations
EnsemblPlants:Bra002705.1EnsemblPlants:Bra002705.1-PEnsemblPlantsGene:Bra002705GO:GO:0005575GO:GO:0016020GO:GO:0016021
PANTHER:PTHR33228PANTHER:PTHR33228:SF5SEG:segTMHMM:TMhelixUniParc:UPI0002544FA1UniProt:M4CES5
MapMan:35.1:::::
Description
AT5G57685 (E=4e-045) AtGDU3 | AtGDU3 (Arabidopsis thaliana GLUTAMINE DUMPER 3)
Coordinates
chrA10:-:8118700..8119143
Molecular Weight (calculated)
16110.7 Da
IEP (calculated)
4.158
GRAVY (calculated)
-0.493
Length
147 amino acids
Sequence
(BLAST)
001: MEGRQYYAPR ENVDGNRTAM GGPHSPWHSP VPYLFGGLAA MLGLIAFALL ILACSYWRLS GYLDGEENQS RERDLEAGDA KPEKEVKAVA FPEKFLVIMA
101: GDVNPTYLAT PVEKSCTCDN DEDEDGDDVE GNDQVVRQIS ESNGATH
Best Arabidopsis Sequence Match ( AT5G57685.1 )
(BLAST)
001: MEGRQYYPPR ENVEGNRTTM GGGPHSPWHS PVPYLFGGLA AMLGLIAFAL LILACSYWRL SGYLDGEENQ SRERDLEVGD VKPDKTAVKP VALPEKFLVI
101: MAGNVKPTYL ATPSVKTCTC DDDDDEDDDV EGSDQVVPRS SESNGETH
Arabidopsis Description
GDU3Protein GLUTAMINE DUMPER 3 [Source:UniProtKB/Swiss-Prot;Acc:Q9FHH5]
SUBAcon: [endoplasmic reticulum,cytosol,plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.