Subcellular Localization
min:
: max
Winner_takes_all: extracellular, plasma membrane, endoplasmic reticulum
Predictor Summary:
Predictor Summary:
- extracellular 3
- golgi 2
- plasma membrane 4
- endoplasmic reticulum 3
- vacuole 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra002705.1-P | Field mustard | endoplasmic reticulum, mitochondrion, plasma membrane | 48.51 | 33.33 |
| Bra002707.1-P | Field mustard | endoplasmic reticulum, mitochondrion, plasma membrane | 48.51 | 33.33 |
| AT5G57685.1 | Thale cress | cytosol, endoplasmic reticulum, plasma membrane | 48.51 | 33.11 |
| Bra006808.1-P | Field mustard | plasma membrane | 46.53 | 32.19 |
| GSMUA_Achr1P23400_001 | Banana | cytosol, mitochondrion, plasma membrane | 49.51 | 31.85 |
| GSMUA_Achr7P05080_001 | Banana | endoplasmic reticulum, plasma membrane, plastid | 45.54 | 30.87 |
| Bra020422.1-P | Field mustard | endoplasmic reticulum, mitochondrion, plasma membrane | 43.56 | 29.73 |
| GSMUA_Achr10P... | Banana | golgi, plasma membrane, plastid | 48.51 | 29.17 |
| Zm00001d036703_P001 | Maize | endoplasmic reticulum, extracellular, plasma membrane | 41.58 | 28.97 |
| CDY13451 | Canola | plasma membrane | 36.63 | 28.46 |
| AT4G25760.1 | Thale cress | cytosol, endoplasmic reticulum, plasma membrane | 35.64 | 27.91 |
| AT4G31730.1 | Thale cress | endoplasmic reticulum, plasma membrane, plastid | 43.56 | 27.85 |
| GSMUA_Achr11P... | Banana | extracellular, golgi, mitochondrion, plastid | 41.58 | 27.63 |
| CDY34757 | Canola | endoplasmic reticulum, nucleus, plasma membrane | 40.59 | 27.33 |
| Bra019142.1-P | Field mustard | endoplasmic reticulum, mitochondrion, plasma membrane | 36.63 | 26.81 |
| Bra013917.1-P | Field mustard | endoplasmic reticulum, mitochondrion, plasma membrane | 36.63 | 26.81 |
| CDY72356 | Canola | endoplasmic reticulum, mitochondrion, plasma membrane | 36.63 | 26.81 |
| CDY68098 | Canola | endoplasmic reticulum, mitochondrion, plasma membrane | 36.63 | 26.81 |
| CDX92732 | Canola | plasma membrane | 35.64 | 26.67 |
| Bra011294.1-P | Field mustard | mitochondrion | 43.56 | 26.51 |
| Zm00001d053729_P001 | Maize | plastid | 37.62 | 26.21 |
| CDX94417 | Canola | endoplasmic reticulum, mitochondrion, plasma membrane | 35.64 | 26.09 |
| Os06t0654400-00 | Rice | endoplasmic reticulum, nucleus, plasma membrane | 47.52 | 26.09 |
| AT2G24762.1 | Thale cress | golgi, plasma membrane, plastid | 38.61 | 25.0 |
| CDX72326 | Canola | endoplasmic reticulum, mitochondrion, plasma membrane | 40.59 | 25.0 |
| KRH02920 | Soybean | endoplasmic reticulum, nucleus, plasma membrane | 40.59 | 25.0 |
| CDX76795 | Canola | golgi, mitochondrion, plastid | 36.63 | 24.67 |
| Bra007834.1-P | Field mustard | golgi, mitochondrion, plasma membrane | 36.63 | 24.67 |
| TraesCS7D01G485100.1 | Wheat | endoplasmic reticulum, nucleus, peroxisome | 49.51 | 24.51 |
| Bra023987.1-P | Field mustard | endoplasmic reticulum, mitochondrion, plasma membrane, plastid | 39.6 | 24.39 |
| HORVU7Hr1G111310.2 | Barley | endoplasmic reticulum, mitochondrion, plasma membrane | 43.56 | 24.31 |
| Zm00001d046927_P001 | Maize | endoplasmic reticulum, mitochondrion, plasma membrane | 43.56 | 23.91 |
| TraesCS7A01G498100.1 | Wheat | endoplasmic reticulum | 44.55 | 23.81 |
| CDX68780 | Canola | mitochondrion | 38.61 | 23.49 |
| EER88756 | Sorghum | endoplasmic reticulum, extracellular, plasma membrane | 43.56 | 22.8 |
| TraesCS6A01G150800.1 | Wheat | endoplasmic reticulum, extracellular, plasma membrane | 37.62 | 22.75 |
| HORVU6Hr1G030050.2 | Barley | peroxisome, vacuole | 41.58 | 22.7 |
| TraesCS6B01G178900.1 | Wheat | endoplasmic reticulum, extracellular, plasma membrane | 38.61 | 22.67 |
| TraesCS7D01G485400.1 | Wheat | golgi, mitochondrion, plasma membrane | 45.54 | 22.55 |
| HORVU1Hr1G003070.1 | Barley | endoplasmic reticulum, peroxisome, plastid | 47.52 | 22.54 |
| HORVU7Hr1G111320.1 | Barley | endoplasmic reticulum, peroxisome, plastid | 47.52 | 22.54 |
| Solyc08g006520.1.1 | Tomato | cytosol, endoplasmic reticulum, plasma membrane, plastid | 39.6 | 22.47 |
| HORVU1Hr1G003060.2 | Barley | endoplasmic reticulum, mitochondrion, plasma membrane | 47.52 | 22.43 |
| TraesCS7A01G497800.1 | Wheat | endoplasmic reticulum, nucleus, plasma membrane | 45.54 | 22.33 |
| VIT_04s0008g07370.t01 | Wine grape | plastid | 37.62 | 22.22 |
| TraesCS7B01G405000.1 | Wheat | endoplasmic reticulum, mitochondrion, plasma membrane | 44.55 | 22.17 |
| PGSC0003DMT400067619 | Potato | mitochondrion | 39.6 | 21.98 |
| TraesCS7D01G485300.1 | Wheat | endoplasmic reticulum, nucleus, plasma membrane | 46.53 | 21.76 |
| HORVU7Hr1G111350.1 | Barley | endoplasmic reticulum, nucleus, plasma membrane | 46.53 | 21.66 |
| HORVU1Hr1G003080.1 | Barley | endoplasmic reticulum, nucleus, plasma membrane | 46.53 | 21.66 |
| EER90144 | Sorghum | endoplasmic reticulum, plasma membrane, plastid | 41.58 | 21.65 |
| TraesCS7D01G485200.1 | Wheat | vacuole | 45.54 | 21.6 |
| TraesCS7B01G404600.1 | Wheat | endoplasmic reticulum | 48.51 | 21.59 |
| TraesCS7B01G404900.1 | Wheat | endoplasmic reticulum, nucleus, plasma membrane | 45.54 | 21.3 |
| TraesCS7A01G497900.1 | Wheat | endoplasmic reticulum | 45.54 | 21.3 |
| PGSC0003DMT400075273 | Potato | cytosol, endoplasmic reticulum, plasma membrane, plastid | 31.68 | 21.19 |
| TraesCS6D01G140800.1 | Wheat | endoplasmic reticulum, extracellular, plasma membrane | 35.64 | 21.18 |
| Solyc12g096480.1.1 | Tomato | plastid | 31.68 | 21.05 |
| TraesCS7A01G498000.1 | Wheat | endoplasmic reticulum, mitochondrion, plasma membrane | 40.59 | 20.6 |
| Solyc12g096490.1.1 | Tomato | endoplasmic reticulum, plasma membrane, plastid | 32.67 | 20.12 |
| EES06373 | Sorghum | endoplasmic reticulum, nucleus, plasma membrane, plastid | 39.6 | 19.8 |
| PGSC0003DMT400075274 | Potato | plastid | 29.7 | 19.11 |
| KRH18976 | Soybean | plasma membrane | 42.57 | 18.38 |
| HORVU0Hr1G022370.1 | Barley | mitochondrion | 44.55 | 18.22 |
| Zm00001d015470_P001 | Maize | plastid | 34.65 | 17.95 |
| TraesCS7B01G404700.1 | Wheat | cytosol, endoplasmic reticulum, plastid | 42.57 | 16.35 |
| Bra020423.1-P | Field mustard | cytosol | 12.87 | 11.93 |
Protein Annotations
| EnsemblPlants:GSMUA_Achr7P16360_001 | EnsemblPlants:GSMUA_Achr7T16360_001 | EnsemblPlantsGene:GSMUA_Achr7G16360_001 | GO:GO:0005575 | GO:GO:0016020 | GO:GO:0016021 |
| PANTHER:PTHR33228 | PANTHER:PTHR33228:SF17 | SEG:seg | TMHMM:TMhelix | UniParc:UPI0002966020 | UniProt:M0TI23 |
| MapMan:35.2 | : | : | : | : | : |
Description
Hypothetical protein [Source:GMGC_GENE;Acc:GSMUA_Achr7G16360_001]
Coordinates
chr7:+:13837925..13839897
Molecular Weight (calculated)
10479.4 Da
IEP (calculated)
8.223
GRAVY (calculated)
-0.143
Length
101 amino acids
Sequence
(BLAST)
(BLAST)
001: MRAGAAFNAT AAVEVPAAAV GGGHSGWRSP VPYLFGGLAA MLGLIAFALL LLACSYWKLS GYLDGGDDGK RERERERDQK DNSASPGISG PSCNSIHNAK
101: N
101: N
001: MEGRQYYPPR ENVEGNRTTM GGGPHSPWHS PVPYLFGGLA AMLGLIAFAL LILACSYWRL SGYLDGEENQ SRERDLEVGD VKPDKTAVKP VALPEKFLVI
101: MAGNVKPTYL ATPSVKTCTC DDDDDEDDDV EGSDQVVPRS SESNGETH
101: MAGNVKPTYL ATPSVKTCTC DDDDDEDDDV EGSDQVVPRS SESNGETH
Arabidopsis Description
GDU3Protein GLUTAMINE DUMPER 3 [Source:UniProtKB/Swiss-Prot;Acc:Q9FHH5]
SUBAcon: [cytosol,plasma membrane,endoplasmic reticulum]
SUBAcon: [cytosol,plasma membrane,endoplasmic reticulum]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.