Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum, nucleus, plasma membrane
Predictor Summary:
Predictor Summary:
- plastid 2
- endoplasmic reticulum 2
- extracellular 1
- vacuole 1
- plasma membrane 2
- golgi 1
- nucleus 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX76795 | Canola | golgi, mitochondrion, plastid | 79.33 | 79.33 |
| AT2G24762.1 | Thale cress | golgi, plasma membrane, plastid | 60.0 | 57.69 |
| CDY13451 | Canola | plasma membrane | 45.33 | 52.31 |
| CDX72326 | Canola | endoplasmic reticulum, mitochondrion, plasma membrane | 44.67 | 40.85 |
| CDX92732 | Canola | plasma membrane | 36.67 | 40.74 |
| GSMUA_Achr7P16360_001 | Banana | endoplasmic reticulum, extracellular, plasma membrane | 27.33 | 40.59 |
| CDY72356 | Canola | endoplasmic reticulum, mitochondrion, plasma membrane | 36.67 | 39.86 |
| CDY68098 | Canola | endoplasmic reticulum, mitochondrion, plasma membrane | 36.67 | 39.86 |
| CDX94417 | Canola | endoplasmic reticulum, mitochondrion, plasma membrane | 36.67 | 39.86 |
| CDX68780 | Canola | mitochondrion | 41.33 | 37.35 |
| Zm00001d036703_P001 | Maize | endoplasmic reticulum, extracellular, plasma membrane | 35.33 | 36.55 |
| KRH02920 | Soybean | endoplasmic reticulum, nucleus, plasma membrane | 38.0 | 34.76 |
| GSMUA_Achr11P... | Banana | extracellular, golgi, mitochondrion, plastid | 34.67 | 34.21 |
| GSMUA_Achr1P23400_001 | Banana | cytosol, mitochondrion, plasma membrane | 35.33 | 33.76 |
| CDX80475 | Canola | cytosol, endoplasmic reticulum, plasma membrane | 30.67 | 33.58 |
| GSMUA_Achr10P... | Banana | golgi, plasma membrane, plastid | 37.33 | 33.33 |
| Zm00001d032115_P001 | Maize | extracellular, golgi, plasma membrane | 39.33 | 33.15 |
| TraesCS4D01G079800.1 | Wheat | endoplasmic reticulum, extracellular, plasma membrane | 36.0 | 33.13 |
| Zm00001d053729_P001 | Maize | plastid | 32.0 | 33.1 |
| TraesCS4A01G234200.1 | Wheat | endoplasmic reticulum, extracellular, plasma membrane | 37.33 | 32.94 |
| TraesCS4B01G081100.1 | Wheat | endoplasmic reticulum, extracellular, plasma membrane | 35.33 | 32.92 |
| GSMUA_Achr7P05080_001 | Banana | endoplasmic reticulum, plasma membrane, plastid | 32.67 | 32.89 |
| VIT_04s0008g07370.t01 | Wine grape | plastid | 37.33 | 32.75 |
| Zm00001d050079_P001 | Maize | extracellular, golgi, plasma membrane | 40.67 | 32.11 |
| Os08t0446800-01 | Rice | endoplasmic reticulum, extracellular, plasma membrane | 38.0 | 31.67 |
| EES13936 | Sorghum | endoplasmic reticulum, extracellular, plasma membrane | 37.33 | 31.64 |
| Os06t0654400-00 | Rice | endoplasmic reticulum, nucleus, plasma membrane | 38.0 | 30.98 |
| HORVU7Hr1G111310.2 | Barley | endoplasmic reticulum, mitochondrion, plasma membrane | 37.33 | 30.94 |
| HORVU4Hr1G013760.1 | Barley | golgi, mitochondrion, plasma membrane, plastid | 38.0 | 30.32 |
| TraesCS7A01G498100.1 | Wheat | endoplasmic reticulum | 38.0 | 30.16 |
| Zm00001d046927_P001 | Maize | endoplasmic reticulum, mitochondrion, plasma membrane | 36.67 | 29.89 |
| EES13610 | Sorghum | plastid | 36.0 | 29.83 |
| TraesCS6D01G140800.1 | Wheat | endoplasmic reticulum, extracellular, plasma membrane | 33.33 | 29.41 |
| EER88756 | Sorghum | endoplasmic reticulum, extracellular, plasma membrane | 37.33 | 29.02 |
| TraesCS7B01G405000.1 | Wheat | endoplasmic reticulum, mitochondrion, plasma membrane | 38.67 | 28.57 |
| EER90144 | Sorghum | endoplasmic reticulum, plasma membrane, plastid | 36.67 | 28.35 |
| TraesCS6A01G150800.1 | Wheat | endoplasmic reticulum, extracellular, plasma membrane | 30.67 | 27.54 |
| TraesCS7D01G485400.1 | Wheat | golgi, mitochondrion, plasma membrane | 37.33 | 27.45 |
| TraesCS6B01G178900.1 | Wheat | endoplasmic reticulum, extracellular, plasma membrane | 31.33 | 27.33 |
| HORVU6Hr1G030050.2 | Barley | peroxisome, vacuole | 33.33 | 27.03 |
| Zm00001d024198_P001 | Maize | plastid | 31.33 | 26.86 |
| EES06373 | Sorghum | endoplasmic reticulum, nucleus, plasma membrane, plastid | 36.0 | 26.73 |
| HORVU1Hr1G003070.1 | Barley | endoplasmic reticulum, peroxisome, plastid | 37.33 | 26.29 |
| HORVU7Hr1G111320.1 | Barley | endoplasmic reticulum, peroxisome, plastid | 37.33 | 26.29 |
| TraesCS7A01G498000.1 | Wheat | endoplasmic reticulum, mitochondrion, plasma membrane | 34.67 | 26.13 |
| TraesCS7B01G404900.1 | Wheat | endoplasmic reticulum, nucleus, plasma membrane | 37.33 | 25.93 |
| TraesCS7D01G485200.1 | Wheat | vacuole | 36.67 | 25.82 |
| TraesCS7A01G497800.1 | Wheat | endoplasmic reticulum, nucleus, plasma membrane | 35.33 | 25.73 |
| HORVU1Hr1G003060.2 | Barley | endoplasmic reticulum, mitochondrion, plasma membrane | 36.67 | 25.7 |
| TraesCS7D01G485100.1 | Wheat | endoplasmic reticulum, nucleus, peroxisome | 34.67 | 25.49 |
| TraesCS7A01G497900.1 | Wheat | endoplasmic reticulum | 36.67 | 25.46 |
| TraesCS7D01G485300.1 | Wheat | endoplasmic reticulum, nucleus, plasma membrane | 36.67 | 25.46 |
| HORVU1Hr1G003080.1 | Barley | endoplasmic reticulum, nucleus, plasma membrane | 35.33 | 24.42 |
| HORVU7Hr1G111350.1 | Barley | endoplasmic reticulum, nucleus, plasma membrane | 35.33 | 24.42 |
| Os08t0249200-00 | Rice | plastid | 32.0 | 24.37 |
| KRH18976 | Soybean | plasma membrane | 38.0 | 24.36 |
| Zm00001d015470_P001 | Maize | plastid | 30.67 | 23.59 |
| TraesCS7B01G404600.1 | Wheat | endoplasmic reticulum | 34.67 | 22.91 |
| HORVU0Hr1G022370.1 | Barley | mitochondrion | 36.0 | 21.86 |
| TraesCS7B01G404700.1 | Wheat | cytosol, endoplasmic reticulum, plastid | 34.0 | 19.39 |
Protein Annotations
| EnsemblPlants:CDY34757 | EnsemblPlantsGene:GSBRNA2T00057296001 | GO:A0A078HAJ3 | GO:GO:0005575 | GO:GO:0016020 | GO:GO:0016021 |
| PANTHER:PTHR33228 | PANTHER:PTHR33228:SF5 | ProteinID:CDY34757 | ProteinID:CDY34757.1 | SEG:seg | TMHMM:TMhelix |
| UniParc:UPI0004EDEA42 | UniProt:A0A078HAJ3 | MapMan:35.1 | : | : | : |
Description
BnaA09g41240DBnaA09g41240D protein [Source:UniProtKB/TrEMBL;Acc:A0A078HAJ3]
Coordinates
chrLK032341:-:109801..110253
Molecular Weight (calculated)
16096.7 Da
IEP (calculated)
4.411
GRAVY (calculated)
-0.303
Length
150 amino acids
Sequence
(BLAST)
(BLAST)
001: MRSLSIKPTS LDAATHATSV ESFGNHQLPQ SSWHSPVPYL FGGLAAMLGL IAFALLILAC SYWRLATSGE DFGEGNGSGV DEEKESRSGE KATYEEKYIV
101: IMAGDDLPTY LATPAGNKCV CSHEGEVVIL EEGDAAKREE SKQNDEATSH
101: IMAGDDLPTY LATPAGNKCV CSHEGEVVIL EEGDAAKREE SKQNDEATSH
001: MRPLSIKPTS LDVARHATSV ESFGNHRPPI SPWHSPVPYL FGGLAAMLGL IAFALLILAC SYWRLSTSGD DSGERVDEEK ESRSGVKAAS AACEEKVLVI
101: MAGDDLPRFL ATPAANKCMC GHEGRMVIFK EDGIGAGEEK MGDREKAKEN EETTSQ
101: MAGDDLPRFL ATPAANKCMC GHEGRMVIFK EDGIGAGEEK MGDREKAKEN EETTSQ
Arabidopsis Description
GDU4Protein GLUTAMINE DUMPER 4 [Source:UniProtKB/Swiss-Prot;Acc:Q8S8A0]
SUBAcon: [plasma membrane,golgi,plastid]
SUBAcon: [plasma membrane,golgi,plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.