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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: mitochondrion, endoplasmic reticulum, plasma membrane

Predictor Summary:
  • plastid 1
  • mitochondrion 2
  • endoplasmic reticulum 2
  • extracellular 1
  • vacuole 1
  • plasma membrane 2
  • golgi 1
Predictors GFP MS/MS Papers
Winner Takes All:endoplasmic reticulum, mitochondrion, plasma membrane
Any Predictor:endoplasmic reticulum, mitochondrion, plasma membrane, plastid
BaCelLo:plastid
iPSORT:mitochondrion
MultiLoc:endoplasmic reticulum
PProwler:secretory
WoLF PSORT:mitochondrion
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra023987.1-P Field mustard endoplasmic reticulum, mitochondrion, plasma membrane, plastid 98.78 98.78
CDY13451 Canola plasma membrane 60.98 76.92
CDX68780 Canola mitochondrion 50.61 50.0
CDY34757 Canola endoplasmic reticulum, nucleus, plasma membrane 40.85 44.67
CDX76795 Canola golgi, mitochondrion, plastid 39.63 43.33
CDX92732 Canola plasma membrane 34.76 42.22
CDX94417 Canola endoplasmic reticulum, mitochondrion, plasma membrane 34.76 41.3
GSMUA_Achr7P16360_001 Banana endoplasmic reticulum, extracellular, plasma membrane 25.0 40.59
CDY68098 Canola endoplasmic reticulum, mitochondrion, plasma membrane 34.15 40.58
CDX80475 Canola cytosol, endoplasmic reticulum, plasma membrane 33.54 40.15
CDY72356 Canola endoplasmic reticulum, mitochondrion, plasma membrane 33.54 39.86
KRH02920 Soybean endoplasmic reticulum, nucleus, plasma membrane 38.41 38.41
Zm00001d036703_P001 Maize endoplasmic reticulum, extracellular, plasma membrane 33.54 37.93
GSMUA_Achr10P... Banana golgi, plasma membrane, plastid 38.41 37.5
GSMUA_Achr11P... Banana extracellular, golgi, mitochondrion, plastid 34.15 36.84
VIT_04s0008g07370.t01 Wine grape plastid 37.8 36.26
GSMUA_Achr1P23400_001 Banana cytosol, mitochondrion, plasma membrane 34.15 35.67
TraesCS4B01G081100.1 Wheat endoplasmic reticulum, extracellular, plasma membrane 34.15 34.78
TraesCS4D01G079800.1 Wheat endoplasmic reticulum, extracellular, plasma membrane 34.15 34.36
Zm00001d053729_P001 Maize plastid 29.88 33.79
Os08t0446800-01 Rice endoplasmic reticulum, extracellular, plasma membrane 35.98 32.78
Os06t0654400-00 Rice endoplasmic reticulum, nucleus, plasma membrane 36.59 32.61
GSMUA_Achr7P05080_001 Banana endoplasmic reticulum, plasma membrane, plastid 29.27 32.21
Zm00001d032115_P001 Maize extracellular, golgi, plasma membrane 34.76 32.02
HORVU4Hr1G013760.1 Barley golgi, mitochondrion, plasma membrane, plastid 36.59 31.91
Zm00001d046927_P001 Maize endoplasmic reticulum, mitochondrion, plasma membrane 35.37 31.52
TraesCS6A01G150800.1 Wheat endoplasmic reticulum, extracellular, plasma membrane 31.71 31.14
EES13936 Sorghum endoplasmic reticulum, extracellular, plasma membrane 33.54 31.07
Zm00001d050079_P001 Maize extracellular, golgi, plasma membrane 35.98 31.05
TraesCS4A01G234200.1 Wheat endoplasmic reticulum, extracellular, plasma membrane 31.71 30.59
HORVU7Hr1G111310.2 Barley endoplasmic reticulum, mitochondrion, plasma membrane 33.54 30.39
EES13610 Sorghum plastid 32.32 29.28
EER88756 Sorghum endoplasmic reticulum, extracellular, plasma membrane 34.15 29.02
EER90144 Sorghum endoplasmic reticulum, plasma membrane, plastid 34.15 28.87
TraesCS6D01G140800.1 Wheat endoplasmic reticulum, extracellular, plasma membrane 29.88 28.82
TraesCS7B01G405000.1 Wheat endoplasmic reticulum, mitochondrion, plasma membrane 35.37 28.57
TraesCS6B01G178900.1 Wheat endoplasmic reticulum, extracellular, plasma membrane 29.88 28.49
TraesCS7A01G498100.1 Wheat endoplasmic reticulum 32.32 28.04
HORVU6Hr1G030050.2 Barley peroxisome, vacuole 31.1 27.57
Zm00001d024198_P001 Maize plastid 29.27 27.43
TraesCS7D01G485100.1 Wheat endoplasmic reticulum, nucleus, peroxisome 33.54 26.96
TraesCS7D01G485400.1 Wheat golgi, mitochondrion, plasma membrane 32.93 26.47
TraesCS7B01G404900.1 Wheat endoplasmic reticulum, nucleus, plasma membrane 34.76 26.39
TraesCS7D01G485200.1 Wheat vacuole 34.15 26.29
TraesCS7A01G497800.1 Wheat endoplasmic reticulum, nucleus, plasma membrane 32.93 26.21
KRH18976 Soybean plasma membrane 37.2 26.07
Os08t0249200-00 Rice plastid 31.1 25.89
EES06373 Sorghum endoplasmic reticulum, nucleus, plasma membrane, plastid 31.71 25.74
TraesCS7A01G497900.1 Wheat endoplasmic reticulum 33.54 25.46
TraesCS7D01G485300.1 Wheat endoplasmic reticulum, nucleus, plasma membrane 33.54 25.46
HORVU7Hr1G111320.1 Barley endoplasmic reticulum, peroxisome, plastid 32.93 25.35
HORVU1Hr1G003070.1 Barley endoplasmic reticulum, peroxisome, plastid 32.93 25.35
HORVU1Hr1G003060.2 Barley endoplasmic reticulum, mitochondrion, plasma membrane 32.93 25.23
TraesCS7A01G498000.1 Wheat endoplasmic reticulum, mitochondrion, plasma membrane 30.49 25.13
Zm00001d015470_P001 Maize plastid 29.27 24.62
HORVU7Hr1G111350.1 Barley endoplasmic reticulum, nucleus, plasma membrane 32.32 24.42
HORVU1Hr1G003080.1 Barley endoplasmic reticulum, nucleus, plasma membrane 32.32 24.42
TraesCS7B01G404600.1 Wheat endoplasmic reticulum 33.54 24.23
HORVU0Hr1G022370.1 Barley mitochondrion 32.93 21.86
TraesCS7B01G404700.1 Wheat cytosol, endoplasmic reticulum, plastid 32.93 20.53
Protein Annotations
EnsemblPlants:CDX72326EnsemblPlantsGene:GSBRNA2T00099816001GO:A0A078C5M6PANTHER:PTHR33228PANTHER:PTHR33228:SF5ProteinID:CDX72326
ProteinID:CDX72326.1SEG:segTMHMM:TMhelixUniParc:UPI0004EAC73CMapMan:35.1:
Description
BnaC07g43480D
Coordinates
chrLK031796:+:693233..693727
Molecular Weight (calculated)
17514.6 Da
IEP (calculated)
4.875
GRAVY (calculated)
-0.340
Length
164 amino acids
Sequence
(BLAST)
001: MRLLSVRSNS EDVAMHATSG SSSASVNHGT VPQSPWHSPV PYLFGGLAAM LGLIAFALLI LACSYWRHSG EEGGRNGGEV DEEKESRSGD KVASGAYEEK
101: FLVIMAGENL PRFLATPTVK KCTCGVQEGK MVISQEDNVV AEEEKQMGEG EAKVKDTGEP TTSH
Best Arabidopsis Sequence Match ( AT4G31730.1 )
(BLAST)
001: MRPLSVQSKF EDVATSTSVN HHGVTPQSPW HSPVPYLFGG LAAMLGLIAF ALLILACSYW RLSSSGEEDG QNVDEEKESR SGDKAANGAY EEKFLVIMAG
101: EDLPRYLATP AMKKCTCGGH EGKMVISQEE SVAKEEEKMR EGEEEKVKDT GETTTTSH
Arabidopsis Description
GDU1Protein GLUTAMINE DUMPER 1 [Source:UniProtKB/Swiss-Prot;Acc:O81775]
SUBAcon: [endoplasmic reticulum,plastid,plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.