Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 5
- plasma membrane 3
- nucleus 1
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- golgi 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| Os01t0374900-01 | |
| Os03t0254900-02 | |
| Os10t0204100-01 |
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d024198_P001 | Maize | plastid | 39.09 | 44.0 |
| EES13610 | Sorghum | plastid | 39.09 | 42.54 |
| GSMUA_Achr1P23400_001 | Banana | cytosol, mitochondrion, plasma membrane | 31.47 | 39.49 |
| GSMUA_Achr7P05080_001 | Banana | endoplasmic reticulum, plasma membrane, plastid | 29.44 | 38.93 |
| CDY13451 | Canola | plasma membrane | 23.86 | 36.15 |
| Bra002707.1-P | Field mustard | endoplasmic reticulum, mitochondrion, plasma membrane | 26.4 | 35.37 |
| Bra002705.1-P | Field mustard | endoplasmic reticulum, mitochondrion, plasma membrane | 26.4 | 35.37 |
| Bra007834.1-P | Field mustard | golgi, mitochondrion, plasma membrane | 26.9 | 35.33 |
| CDX76795 | Canola | golgi, mitochondrion, plastid | 26.9 | 35.33 |
| Os06t0654400-00 | Rice | endoplasmic reticulum, nucleus, plasma membrane | 32.99 | 35.33 |
| AT5G57685.1 | Thale cress | cytosol, endoplasmic reticulum, plasma membrane | 26.4 | 35.14 |
| Bra006808.1-P | Field mustard | plasma membrane | 25.89 | 34.93 |
| Bra020422.1-P | Field mustard | endoplasmic reticulum, mitochondrion, plasma membrane | 25.89 | 34.46 |
| AT4G25760.1 | Thale cress | cytosol, endoplasmic reticulum, plasma membrane | 22.34 | 34.11 |
| KRH02920 | Soybean | endoplasmic reticulum, nucleus, plasma membrane | 27.41 | 32.93 |
| AT2G24762.1 | Thale cress | golgi, plasma membrane, plastid | 25.89 | 32.69 |
| CDY34757 | Canola | endoplasmic reticulum, nucleus, plasma membrane | 24.37 | 32.0 |
| Bra013917.1-P | Field mustard | endoplasmic reticulum, mitochondrion, plasma membrane | 22.34 | 31.88 |
| CDX94417 | Canola | endoplasmic reticulum, mitochondrion, plasma membrane | 22.34 | 31.88 |
| CDY68098 | Canola | endoplasmic reticulum, mitochondrion, plasma membrane | 22.34 | 31.88 |
| CDX92732 | Canola | plasma membrane | 21.83 | 31.85 |
| CDY72356 | Canola | endoplasmic reticulum, mitochondrion, plasma membrane | 21.83 | 31.16 |
| Bra019142.1-P | Field mustard | endoplasmic reticulum, mitochondrion, plasma membrane | 21.83 | 31.16 |
| PGSC0003DMT400075273 | Potato | cytosol, endoplasmic reticulum, plasma membrane, plastid | 23.86 | 31.13 |
| CDX72326 | Canola | endoplasmic reticulum, mitochondrion, plasma membrane | 25.89 | 31.1 |
| VIT_04s0008g07370.t01 | Wine grape | plastid | 26.9 | 30.99 |
| CDX68780 | Canola | mitochondrion | 25.89 | 30.72 |
| PGSC0003DMT400075274 | Potato | plastid | 24.37 | 30.57 |
| Os08t0446800-01 | Rice | endoplasmic reticulum, extracellular, plasma membrane | 27.92 | 30.56 |
| Bra023987.1-P | Field mustard | endoplasmic reticulum, mitochondrion, plasma membrane, plastid | 25.38 | 30.49 |
| AT4G31730.1 | Thale cress | endoplasmic reticulum, plasma membrane, plastid | 24.37 | 30.38 |
| Solyc12g096480.1.1 | Tomato | plastid | 22.84 | 29.61 |
| Bra011294.1-P | Field mustard | mitochondrion | 24.87 | 29.52 |
| Solyc08g006520.1.1 | Tomato | cytosol, endoplasmic reticulum, plasma membrane, plastid | 25.89 | 28.65 |
| PGSC0003DMT400067619 | Potato | mitochondrion | 25.89 | 28.02 |
| Solyc12g096490.1.1 | Tomato | endoplasmic reticulum, plasma membrane, plastid | 21.83 | 26.22 |
| KRH18976 | Soybean | plasma membrane | 27.41 | 23.08 |
| Bra020423.1-P | Field mustard | cytosol | 12.69 | 22.94 |
Protein Annotations
| EnsemblPlants:Os08t0249200-00 | EnsemblPlantsGene:Os08g0249200 | GO:GO:0005575 | GO:GO:0016020 | GO:GO:0016021 | PANTHER:PTHR33228 |
| PANTHER:PTHR33228:SF8 | ProteinID:BAT04550.1 | SEG:seg | TMHMM:TMhelix | UniParc:UPI000393BCFC | UniProt:A0A0P0XDK8 |
| MapMan:35.2 | : | : | : | : | : |
Description
Similar to GDU1. (Os08t0249200-00)
Coordinates
chr8:-:9111086..9111844
Molecular Weight (calculated)
19691.5 Da
IEP (calculated)
7.125
GRAVY (calculated)
0.254
Length
197 amino acids
Sequence
(BLAST)
(BLAST)
001: MHASHHSPSI AISPTLSLSL NSQAKNCQGH VAMRTMVAAP PPSPAMAVSP WHSPVPYLFG GLAAMLGLIT LALLILACSY WKLNSYLGTG HSSSAAAAAA
101: AGDGGDGDGG SKSPATAVAA FPVVYGDLVA VVMAGERMPT FLAAPIVRRP PSTDTSSSAV AEVASPENGC DAAEGGAASR PPPQPVAARQ AVQLAQL
101: AGDGGDGDGG SKSPATAVAA FPVVYGDLVA VVMAGERMPT FLAAPIVRRP PSTDTSSSAV AEVASPENGC DAAEGGAASR PPPQPVAARQ AVQLAQL
001: MEGRQYYPPR ENVEGNRTTM GGGPHSPWHS PVPYLFGGLA AMLGLIAFAL LILACSYWRL SGYLDGEENQ SRERDLEVGD VKPDKTAVKP VALPEKFLVI
101: MAGNVKPTYL ATPSVKTCTC DDDDDEDDDV EGSDQVVPRS SESNGETH
101: MAGNVKPTYL ATPSVKTCTC DDDDDEDDDV EGSDQVVPRS SESNGETH
Arabidopsis Description
GDU3Protein GLUTAMINE DUMPER 3 [Source:UniProtKB/Swiss-Prot;Acc:Q9FHH5]
SUBAcon: [endoplasmic reticulum,cytosol,plasma membrane]
SUBAcon: [endoplasmic reticulum,cytosol,plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.