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Field mustard
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Field mustard
Subcellular Localization
min:
: max

 
Winner_takes_all: golgi, plasma membrane, mitochondrion

Predictor Summary:
  • plastid 2
  • golgi 2
  • nucleus 1
  • endoplasmic reticulum 1
  • plasma membrane 2
  • vacuole 1
  • extracellular 1
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:golgi, mitochondrion, plasma membrane
Any Predictor:mitochondrion, nucleus, plastid, secretory
BaCelLo:plastid
iPSORT:plastid
MultiLoc:golgi
Plant-mPloc:nucleus
PProwler:secretory
WoLF PSORT:mitochondrion
YLoc:plasma membrane
PPI

Inferred distinct locusB in Crop

locusBlocations
Bra009546.1-P
Bra028846.1-P
Bra029788.1-P
Bra034086.1-P

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT2G24762.1 Bra029788.1-P AT3G09770.1 22291198
AT2G24762.1 Bra034086.1-P AT3G09770.1 22291198
AT2G24762.1 Bra009546.1-P AT5G03200.1 22291198
AT2G24762.1 Bra028846.1-P AT5G03200.1 22291198
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDX76795 Canola golgi, mitochondrion, plastid 91.33 91.33
AT2G24762.1 Thale cress golgi, plasma membrane, plastid 63.33 60.9
Bra013917.1-P Field mustard endoplasmic reticulum, mitochondrion, plasma membrane 37.33 40.58
Bra019142.1-P Field mustard endoplasmic reticulum, mitochondrion, plasma membrane 37.33 40.58
Bra023987.1-P Field mustard endoplasmic reticulum, mitochondrion, plasma membrane, plastid 42.0 38.41
Bra006808.1-P Field mustard plasma membrane 37.33 38.36
Bra002705.1-P Field mustard endoplasmic reticulum, mitochondrion, plasma membrane 36.67 37.41
Bra002707.1-P Field mustard endoplasmic reticulum, mitochondrion, plasma membrane 36.67 37.41
Bra011294.1-P Field mustard mitochondrion 41.33 37.35
GSMUA_Achr7P16360_001 Banana endoplasmic reticulum, extracellular, plasma membrane 24.67 36.63
Zm00001d036703_P001 Maize endoplasmic reticulum, extracellular, plasma membrane 35.33 36.55
Bra020422.1-P Field mustard endoplasmic reticulum, mitochondrion, plasma membrane 36.0 36.49
GSMUA_Achr11P... Banana extracellular, golgi, mitochondrion, plastid 35.33 34.87
GSMUA_Achr1P23400_001 Banana cytosol, mitochondrion, plasma membrane 35.33 33.76
Zm00001d053729_P001 Maize plastid 32.0 33.1
Bra009804.1-P Field mustard extracellular 22.0 33.0
KRH02920 Soybean endoplasmic reticulum, nucleus, plasma membrane 36.0 32.93
GSMUA_Achr7P05080_001 Banana endoplasmic reticulum, plasma membrane, plastid 32.67 32.89
Os08t0446800-01 Rice endoplasmic reticulum, extracellular, plasma membrane 39.33 32.78
GSMUA_Achr10P... Banana golgi, plasma membrane, plastid 36.67 32.74
Zm00001d032115_P001 Maize extracellular, golgi, plasma membrane 38.67 32.58
Zm00001d050079_P001 Maize extracellular, golgi, plasma membrane 40.67 32.11
TraesCS4D01G079800.1 Wheat endoplasmic reticulum, extracellular, plasma membrane 34.67 31.9
TraesCS4B01G081100.1 Wheat endoplasmic reticulum, extracellular, plasma membrane 34.0 31.68
EES13936 Sorghum endoplasmic reticulum, extracellular, plasma membrane 37.33 31.64
TraesCS4A01G234200.1 Wheat endoplasmic reticulum, extracellular, plasma membrane 35.33 31.18
VIT_04s0008g07370.t01 Wine grape plastid 35.33 30.99
Os06t0654400-00 Rice endoplasmic reticulum, nucleus, plasma membrane 37.33 30.43
HORVU7Hr1G111310.2 Barley endoplasmic reticulum, mitochondrion, plasma membrane 36.0 29.83
Zm00001d046927_P001 Maize endoplasmic reticulum, mitochondrion, plasma membrane 36.0 29.35
EER88756 Sorghum endoplasmic reticulum, extracellular, plasma membrane 37.33 29.02
EES13610 Sorghum plastid 34.67 28.73
HORVU4Hr1G013760.1 Barley golgi, mitochondrion, plasma membrane, plastid 36.0 28.72
TraesCS7A01G498100.1 Wheat endoplasmic reticulum 36.0 28.57
EER90144 Sorghum endoplasmic reticulum, plasma membrane, plastid 36.67 28.35
TraesCS6D01G140800.1 Wheat endoplasmic reticulum, extracellular, plasma membrane 31.33 27.65
TraesCS7A01G498000.1 Wheat endoplasmic reticulum, mitochondrion, plasma membrane 36.0 27.14
TraesCS7B01G405000.1 Wheat endoplasmic reticulum, mitochondrion, plasma membrane 36.67 27.09
Os08t0249200-00 Rice plastid 35.33 26.9
HORVU1Hr1G003070.1 Barley endoplasmic reticulum, peroxisome, plastid 37.33 26.29
TraesCS7D01G485200.1 Wheat vacuole 37.33 26.29
HORVU7Hr1G111320.1 Barley endoplasmic reticulum, peroxisome, plastid 37.33 26.29
EES06373 Sorghum endoplasmic reticulum, nucleus, plasma membrane, plastid 35.33 26.24
TraesCS7D01G485400.1 Wheat golgi, mitochondrion, plasma membrane 35.33 25.98
TraesCS6A01G150800.1 Wheat endoplasmic reticulum, extracellular, plasma membrane 28.67 25.75
TraesCS7A01G497800.1 Wheat endoplasmic reticulum, nucleus, plasma membrane 35.33 25.73
TraesCS6B01G178900.1 Wheat endoplasmic reticulum, extracellular, plasma membrane 29.33 25.58
TraesCS7D01G485100.1 Wheat endoplasmic reticulum, nucleus, peroxisome 34.67 25.49
HORVU6Hr1G030050.2 Barley peroxisome, vacuole 31.33 25.41
HORVU1Hr1G003060.2 Barley endoplasmic reticulum, mitochondrion, plasma membrane 36.0 25.23
Zm00001d024198_P001 Maize plastid 29.33 25.14
TraesCS7B01G404900.1 Wheat endoplasmic reticulum, nucleus, plasma membrane 36.0 25.0
TraesCS7A01G497900.1 Wheat endoplasmic reticulum 36.0 25.0
Bra020423.1-P Field mustard cytosol 18.0 24.77
TraesCS7D01G485300.1 Wheat endoplasmic reticulum, nucleus, plasma membrane 35.33 24.54
HORVU7Hr1G111350.1 Barley endoplasmic reticulum, nucleus, plasma membrane 35.33 24.42
HORVU1Hr1G003080.1 Barley endoplasmic reticulum, nucleus, plasma membrane 35.33 24.42
KRH18976 Soybean plasma membrane 36.0 23.08
TraesCS7B01G404600.1 Wheat endoplasmic reticulum 34.0 22.47
Zm00001d015470_P001 Maize plastid 28.0 21.54
HORVU0Hr1G022370.1 Barley mitochondrion 33.33 20.24
TraesCS7B01G404700.1 Wheat cytosol, endoplasmic reticulum, plastid 34.0 19.39
Protein Annotations
EnsemblPlants:Bra007834.1EnsemblPlants:Bra007834.1-PEnsemblPlantsGene:Bra007834GO:GO:0005575GO:GO:0006810GO:GO:0008150
GO:GO:0016020GO:GO:0016021GO:GO:0080143PANTHER:PTHR33228PANTHER:PTHR33228:SF5SEG:seg
TMHMM:TMhelixUniParc:UPI0002542D67UniProt:M4CUD9MapMan:35.1::
Description
AT2G24762 (E=3e-041) AtGDU4 | AtGDU4 (Arabidopsis thaliana GLUTAMINE DUMPER 4)
Coordinates
chrA09:-:31154700..31155152
Molecular Weight (calculated)
16200.9 Da
IEP (calculated)
4.503
GRAVY (calculated)
-0.339
Length
150 amino acids
Sequence
(BLAST)
001: MRSLSIKPTS LDAARHATSV ESFGNHQLPQ SSWHSPVPYL FGGLAAMLGL IAFALLILAC SYWRLATSGE DFGEGNGSGV DEEKESRSGE KATYEEKYIV
101: IMAGDDLPTY LATPASNKCV CSHEGEVVIL EEGDAAKREE SKQNDEATSR
Best Arabidopsis Sequence Match ( AT2G24762.1 )
(BLAST)
001: MRPLSIKPTS LDVARHATSV ESFGNHRPPI SPWHSPVPYL FGGLAAMLGL IAFALLILAC SYWRLSTSGD DSGERVDEEK ESRSGVKAAS AACEEKVLVI
101: MAGDDLPRFL ATPAANKCMC GHEGRMVIFK EDGIGAGEEK MGDREKAKEN EETTSQ
Arabidopsis Description
GDU4Protein GLUTAMINE DUMPER 4 [Source:UniProtKB/Swiss-Prot;Acc:Q8S8A0]
SUBAcon: [golgi,plasma membrane,plastid]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.