Subcellular Localization
min:
: max
Winner_takes_all: extracellular, golgi, plastid, mitochondrion
Predictor Summary:
Predictor Summary:
- plastid 2
- plasma membrane 3
- mitochondrion 2
- golgi 2
- extracellular 2
- endoplasmic reticulum 1
- vacuole 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr1P23400_001 | Banana | cytosol, mitochondrion, plasma membrane | 44.08 | 42.68 |
| Bra002705.1-P | Field mustard | endoplasmic reticulum, mitochondrion, plasma membrane | 40.79 | 42.18 |
| Bra002707.1-P | Field mustard | endoplasmic reticulum, mitochondrion, plasma membrane | 40.79 | 42.18 |
| GSMUA_Achr7P16360_001 | Banana | endoplasmic reticulum, extracellular, plasma membrane | 27.63 | 41.58 |
| Bra006808.1-P | Field mustard | plasma membrane | 39.47 | 41.1 |
| CDY13451 | Canola | plasma membrane | 34.21 | 40.0 |
| AT5G57685.1 | Thale cress | cytosol, endoplasmic reticulum, plasma membrane | 38.16 | 39.19 |
| TraesCS4B01G081100.1 | Wheat | endoplasmic reticulum, extracellular, plasma membrane | 41.45 | 39.13 |
| EES13936 | Sorghum | endoplasmic reticulum, extracellular, plasma membrane | 45.39 | 38.98 |
| TraesCS4A01G234200.1 | Wheat | endoplasmic reticulum, extracellular, plasma membrane | 43.42 | 38.82 |
| AT4G25760.1 | Thale cress | cytosol, endoplasmic reticulum, plasma membrane | 32.89 | 38.76 |
| Zm00001d032115_P001 | Maize | extracellular, golgi, plasma membrane | 44.74 | 38.2 |
| CDY72356 | Canola | endoplasmic reticulum, mitochondrion, plasma membrane | 34.21 | 37.68 |
| Bra019142.1-P | Field mustard | endoplasmic reticulum, mitochondrion, plasma membrane | 34.21 | 37.68 |
| VIT_04s0008g07370.t01 | Wine grape | plastid | 42.11 | 37.43 |
| TraesCS4D01G079800.1 | Wheat | endoplasmic reticulum, extracellular, plasma membrane | 40.13 | 37.42 |
| Os08t0446800-01 | Rice | endoplasmic reticulum, extracellular, plasma membrane | 44.08 | 37.22 |
| CDX92732 | Canola | plasma membrane | 32.89 | 37.04 |
| GSMUA_Achr7P05080_001 | Banana | endoplasmic reticulum, plasma membrane, plastid | 36.18 | 36.91 |
| Zm00001d050079_P001 | Maize | extracellular, golgi, plasma membrane | 46.05 | 36.84 |
| Bra020422.1-P | Field mustard | endoplasmic reticulum, mitochondrion, plasma membrane | 35.53 | 36.49 |
| GSMUA_Achr10P... | Banana | golgi, plasma membrane, plastid | 40.13 | 36.31 |
| CDX94417 | Canola | endoplasmic reticulum, mitochondrion, plasma membrane | 32.89 | 36.23 |
| Bra013917.1-P | Field mustard | endoplasmic reticulum, mitochondrion, plasma membrane | 32.89 | 36.23 |
| CDY68098 | Canola | endoplasmic reticulum, mitochondrion, plasma membrane | 32.89 | 36.23 |
| HORVU4Hr1G013760.1 | Barley | golgi, mitochondrion, plasma membrane, plastid | 44.08 | 35.64 |
| Bra007834.1-P | Field mustard | golgi, mitochondrion, plasma membrane | 34.87 | 35.33 |
| AT2G24762.1 | Thale cress | golgi, plasma membrane, plastid | 36.18 | 35.26 |
| CDX68780 | Canola | mitochondrion | 38.16 | 34.94 |
| AT4G31730.1 | Thale cress | endoplasmic reticulum, plasma membrane, plastid | 36.18 | 34.81 |
| KRH02920 | Soybean | endoplasmic reticulum, nucleus, plasma membrane | 37.5 | 34.76 |
| CDY34757 | Canola | endoplasmic reticulum, nucleus, plasma membrane | 34.21 | 34.67 |
| CDX76795 | Canola | golgi, mitochondrion, plastid | 34.21 | 34.67 |
| PGSC0003DMT400067619 | Potato | mitochondrion | 41.45 | 34.62 |
| PGSC0003DMT400075273 | Potato | cytosol, endoplasmic reticulum, plasma membrane, plastid | 34.21 | 34.44 |
| Solyc12g096480.1.1 | Tomato | plastid | 34.21 | 34.21 |
| CDX72326 | Canola | endoplasmic reticulum, mitochondrion, plasma membrane | 36.84 | 34.15 |
| Bra011294.1-P | Field mustard | mitochondrion | 36.84 | 33.73 |
| Solyc12g096490.1.1 | Tomato | endoplasmic reticulum, plasma membrane, plastid | 36.18 | 33.54 |
| Bra023987.1-P | Field mustard | endoplasmic reticulum, mitochondrion, plasma membrane, plastid | 36.18 | 33.54 |
| PGSC0003DMT400075274 | Potato | plastid | 34.21 | 33.12 |
| Solyc08g006520.1.1 | Tomato | cytosol, endoplasmic reticulum, plasma membrane, plastid | 37.5 | 32.02 |
| KRH18976 | Soybean | plasma membrane | 38.16 | 24.79 |
| Bra020423.1-P | Field mustard | cytosol | 17.11 | 23.85 |
Protein Annotations
| EnsemblPlants:GSMUA_Achr11P08220_001 | EnsemblPlants:GSMUA_Achr11T08220_001 | EnsemblPlantsGene:GSMUA_Achr11G08220_001 | GO:GO:0005575 | GO:GO:0016020 | GO:GO:0016021 |
| PANTHER:PTHR33228 | PANTHER:PTHR33228:SF17 | SEG:seg | TMHMM:TMhelix | UniParc:UPI0002967726 | UniProt:M0RQF2 |
| MapMan:35.1 | : | : | : | : | : |
Description
GDU1, putative, expressed [Source:GMGC_GENE;Acc:GSMUA_Achr11G08220_001]
Coordinates
chr11:-:6367278..6367736
Molecular Weight (calculated)
15291.0 Da
IEP (calculated)
4.266
GRAVY (calculated)
0.282
Length
152 amino acids
Sequence
(BLAST)
(BLAST)
001: MRPGVGLNTS RGAAATSPSG AVSSVPHSAW HSPVPYLFGG LAAMMGLIAF ALLILACSYW KFSGYLDSVE DADNREADGE ASCGPGDAAK PPLLFEEGIV
101: VIMAGDCMPT FLATPIASCA ATVAAKSDDS SNAAAHGGVI SPQVTAPESC SN
101: VIMAGDCMPT FLATPIASCA ATVAAKSDDS SNAAAHGGVI SPQVTAPESC SN
001: MEGRQYYPPR ENVEGNRTTM GGGPHSPWHS PVPYLFGGLA AMLGLIAFAL LILACSYWRL SGYLDGEENQ SRERDLEVGD VKPDKTAVKP VALPEKFLVI
101: MAGNVKPTYL ATPSVKTCTC DDDDDEDDDV EGSDQVVPRS SESNGETH
101: MAGNVKPTYL ATPSVKTCTC DDDDDEDDDV EGSDQVVPRS SESNGETH
Arabidopsis Description
GDU3Protein GLUTAMINE DUMPER 3 [Source:UniProtKB/Swiss-Prot;Acc:Q9FHH5]
SUBAcon: [cytosol,plasma membrane,endoplasmic reticulum]
SUBAcon: [cytosol,plasma membrane,endoplasmic reticulum]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.