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Field mustard
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Field mustard
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • nucleus 2
  • plasma membrane 3
  • plastid 1
  • extracellular 1
  • endoplasmic reticulum 1
  • vacuole 1
  • golgi 1
  • cytosol 1
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:cytosol, nucleus, plastid, secretory
BaCelLo:nucleus
EpiLoc:nucleus
MultiLoc:plasma membrane
Plant-mPloc:plastid
PProwler:secretory
WoLF PSORT:cytosol
YLoc:plasma membrane
PPI

Inferred distinct locusB in Crop

locusBlocations
Bra003133.1-P
Bra009546.1-P
Bra028846.1-P
Bra029788.1-P
Bra034086.1-P

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT5G57685.1 Bra029788.1-P AT3G09770.1 22291198
AT5G57685.1 Bra034086.1-P AT3G09770.1 22291198
AT5G57685.1 Bra003133.1-P AT3G53410.1 22291198
AT5G57685.1 Bra009546.1-P AT5G03200.1 22291198
AT5G57685.1 Bra028846.1-P AT5G03200.1 22291198
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra002705.1-P Field mustard endoplasmic reticulum, mitochondrion, plasma membrane 76.03 75.51
Bra002707.1-P Field mustard endoplasmic reticulum, mitochondrion, plasma membrane 76.03 75.51
AT5G57685.1 Thale cress cytosol, endoplasmic reticulum, plasma membrane 72.6 71.62
Bra020422.1-P Field mustard endoplasmic reticulum, mitochondrion, plasma membrane 64.38 63.51
Bra020423.1-P Field mustard cytosol 43.15 57.8
Bra013917.1-P Field mustard endoplasmic reticulum, mitochondrion, plasma membrane 49.32 52.17
Bra019142.1-P Field mustard endoplasmic reticulum, mitochondrion, plasma membrane 45.89 48.55
GSMUA_Achr7P16360_001 Banana endoplasmic reticulum, extracellular, plasma membrane 32.19 46.53
Bra009804.1-P Field mustard extracellular 27.4 40.0
TraesCS4B01G081100.1 Wheat endoplasmic reticulum, extracellular, plasma membrane 43.84 39.75
KRH02920 Soybean endoplasmic reticulum, nucleus, plasma membrane 44.52 39.63
GSMUA_Achr11P... Banana extracellular, golgi, mitochondrion, plastid 41.1 39.47
EES13936 Sorghum endoplasmic reticulum, extracellular, plasma membrane 46.58 38.42
GSMUA_Achr7P05080_001 Banana endoplasmic reticulum, plasma membrane, plastid 39.04 38.26
GSMUA_Achr1P23400_001 Banana cytosol, mitochondrion, plasma membrane 41.1 38.22
Zm00001d036703_P001 Maize endoplasmic reticulum, extracellular, plasma membrane 37.67 37.93
Bra007834.1-P Field mustard golgi, mitochondrion, plasma membrane 38.36 37.33
TraesCS4D01G079800.1 Wheat endoplasmic reticulum, extracellular, plasma membrane 41.1 36.81
Zm00001d032115_P001 Maize extracellular, golgi, plasma membrane 44.52 36.52
TraesCS4A01G234200.1 Wheat endoplasmic reticulum, extracellular, plasma membrane 42.47 36.47
Os08t0446800-01 Rice endoplasmic reticulum, extracellular, plasma membrane 44.52 36.11
Bra011294.1-P Field mustard mitochondrion 40.41 35.54
Bra023987.1-P Field mustard endoplasmic reticulum, mitochondrion, plasma membrane, plastid 39.73 35.37
GSMUA_Achr10P... Banana golgi, plasma membrane, plastid 40.41 35.12
Os06t0654400-00 Rice endoplasmic reticulum, nucleus, plasma membrane 43.84 34.78
Zm00001d046927_P001 Maize endoplasmic reticulum, mitochondrion, plasma membrane 43.15 34.24
HORVU4Hr1G013760.1 Barley golgi, mitochondrion, plasma membrane, plastid 43.84 34.04
Zm00001d053729_P001 Maize plastid 33.56 33.79
Zm00001d050079_P001 Maize extracellular, golgi, plasma membrane 42.47 32.63
VIT_04s0008g07370.t01 Wine grape plastid 37.67 32.16
TraesCS7A01G498100.1 Wheat endoplasmic reticulum 40.41 31.22
HORVU7Hr1G111310.2 Barley endoplasmic reticulum, mitochondrion, plasma membrane 38.36 30.94
TraesCS7D01G485100.1 Wheat endoplasmic reticulum, nucleus, peroxisome 42.47 30.39
TraesCS7A01G497800.1 Wheat endoplasmic reticulum, nucleus, plasma membrane 41.78 29.61
HORVU7Hr1G111320.1 Barley endoplasmic reticulum, peroxisome, plastid 43.15 29.58
HORVU1Hr1G003070.1 Barley endoplasmic reticulum, peroxisome, plastid 43.15 29.58
KRH18976 Soybean plasma membrane 47.26 29.49
EER88756 Sorghum endoplasmic reticulum, extracellular, plasma membrane 38.36 29.02
TraesCS7B01G404900.1 Wheat endoplasmic reticulum, nucleus, plasma membrane 42.47 28.7
TraesCS7D01G485300.1 Wheat endoplasmic reticulum, nucleus, plasma membrane 42.47 28.7
TraesCS7B01G405000.1 Wheat endoplasmic reticulum, mitochondrion, plasma membrane 39.73 28.57
TraesCS7D01G485400.1 Wheat golgi, mitochondrion, plasma membrane 39.73 28.43
TraesCS6D01G140800.1 Wheat endoplasmic reticulum, extracellular, plasma membrane 32.88 28.24
HORVU1Hr1G003060.2 Barley endoplasmic reticulum, mitochondrion, plasma membrane 41.1 28.04
EER90144 Sorghum endoplasmic reticulum, plasma membrane, plastid 36.99 27.84
TraesCS7D01G485200.1 Wheat vacuole 40.41 27.7
HORVU6Hr1G030050.2 Barley peroxisome, vacuole 34.93 27.57
TraesCS6A01G150800.1 Wheat endoplasmic reticulum, extracellular, plasma membrane 31.51 27.54
TraesCS6B01G178900.1 Wheat endoplasmic reticulum, extracellular, plasma membrane 32.19 27.33
TraesCS7A01G497900.1 Wheat endoplasmic reticulum 40.41 27.31
HORVU7Hr1G111350.1 Barley endoplasmic reticulum, nucleus, plasma membrane 40.41 27.19
HORVU1Hr1G003080.1 Barley endoplasmic reticulum, nucleus, plasma membrane 40.41 27.19
EES13610 Sorghum plastid 33.56 27.07
TraesCS7A01G498000.1 Wheat endoplasmic reticulum, mitochondrion, plasma membrane 35.62 26.13
Os08t0249200-00 Rice plastid 34.93 25.89
Zm00001d024198_P001 Maize plastid 30.82 25.71
TraesCS7B01G404600.1 Wheat endoplasmic reticulum 39.73 25.55
EES06373 Sorghum endoplasmic reticulum, nucleus, plasma membrane, plastid 34.93 25.25
HORVU0Hr1G022370.1 Barley mitochondrion 38.36 22.67
Zm00001d015470_P001 Maize plastid 30.14 22.56
TraesCS7B01G404700.1 Wheat cytosol, endoplasmic reticulum, plastid 40.41 22.43
Protein Annotations
EnsemblPlants:Bra006808.1EnsemblPlants:Bra006808.1-PEnsemblPlantsGene:Bra006808GO:GO:0005575GO:GO:0016020GO:GO:0016021
PANTHER:PTHR33228PANTHER:PTHR33228:SF5SEG:segTMHMM:TMhelixUniParc:UPI000253FC9AUniProt:M4CRG7
MapMan:35.1:::::
Description
AT5G57685 (E=4e-050) AtGDU3 | AtGDU3 (Arabidopsis thaliana GLUTAMINE DUMPER 3)
Coordinates
chrA03:+:5132423..5132863
Molecular Weight (calculated)
16025.8 Da
IEP (calculated)
4.548
GRAVY (calculated)
-0.479
Length
146 amino acids
Sequence
(BLAST)
001: MEGRQYYPPR ENVDGNRTTL GGPHSPWHSP VPYLFGGLAA MLGLIAFALL ILACSYWRLS GYLYGEEDQS RDRDLEAGDV KPDKAVKAVP LPEKFLVIMA
101: GDVKPTYLAT PAEKSCTCDD DEDGDYDVKA GDQVVRRSTE SNGSTH
Best Arabidopsis Sequence Match ( AT5G57685.1 )
(BLAST)
001: MEGRQYYPPR ENVEGNRTTM GGGPHSPWHS PVPYLFGGLA AMLGLIAFAL LILACSYWRL SGYLDGEENQ SRERDLEVGD VKPDKTAVKP VALPEKFLVI
101: MAGNVKPTYL ATPSVKTCTC DDDDDEDDDV EGSDQVVPRS SESNGETH
Arabidopsis Description
GDU3Protein GLUTAMINE DUMPER 3 [Source:UniProtKB/Swiss-Prot;Acc:Q9FHH5]
SUBAcon: [endoplasmic reticulum,cytosol,plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.