Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum, nucleus, plasma membrane
Predictor Summary:
Predictor Summary:
- mitochondrion 1
- endoplasmic reticulum 2
- extracellular 1
- vacuole 1
- plasma membrane 2
- golgi 1
- nucleus 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS7B01G404900.1 | Wheat | endoplasmic reticulum, nucleus, plasma membrane | 82.87 | 82.87 |
| TraesCS7A01G497900.1 | Wheat | endoplasmic reticulum | 78.7 | 78.7 |
| HORVU1Hr1G003060.2 | Barley | endoplasmic reticulum, mitochondrion, plasma membrane | 76.85 | 77.57 |
| TraesCS7D01G485100.1 | Wheat | endoplasmic reticulum, nucleus, peroxisome | 57.41 | 60.78 |
| Zm00001d036703_P001 | Maize | endoplasmic reticulum, extracellular, plasma membrane | 37.96 | 56.55 |
| TraesCS7D01G485200.1 | Wheat | vacuole | 51.39 | 52.11 |
| Os06t0654400-00 | Rice | endoplasmic reticulum, nucleus, plasma membrane | 42.59 | 50.0 |
| EER90144 | Sorghum | endoplasmic reticulum, plasma membrane, plastid | 44.44 | 49.48 |
| Zm00001d046927_P001 | Maize | endoplasmic reticulum, mitochondrion, plasma membrane | 41.67 | 48.91 |
| TraesCS7D01G485400.1 | Wheat | golgi, mitochondrion, plasma membrane | 44.91 | 47.55 |
| EER88756 | Sorghum | endoplasmic reticulum, extracellular, plasma membrane | 42.13 | 47.15 |
| GSMUA_Achr7P16360_001 | Banana | endoplasmic reticulum, extracellular, plasma membrane | 21.76 | 46.53 |
| Bra002705.1-P | Field mustard | endoplasmic reticulum, mitochondrion, plasma membrane | 29.17 | 42.86 |
| Bra002707.1-P | Field mustard | endoplasmic reticulum, mitochondrion, plasma membrane | 29.17 | 42.86 |
| Bra006808.1-P | Field mustard | plasma membrane | 28.7 | 42.47 |
| TraesCS4D01G079800.1 | Wheat | endoplasmic reticulum, extracellular, plasma membrane | 31.48 | 41.72 |
| Bra020422.1-P | Field mustard | endoplasmic reticulum, mitochondrion, plasma membrane | 28.24 | 41.22 |
| CDY13451 | Canola | plasma membrane | 24.54 | 40.77 |
| AT5G57685.1 | Thale cress | cytosol, endoplasmic reticulum, plasma membrane | 27.31 | 39.86 |
| AT4G25760.1 | Thale cress | cytosol, endoplasmic reticulum, plasma membrane | 23.61 | 39.53 |
| TraesCS6D01G140800.1 | Wheat | endoplasmic reticulum, extracellular, plasma membrane | 31.02 | 39.41 |
| CDX92732 | Canola | plasma membrane | 24.54 | 39.26 |
| CDY72356 | Canola | endoplasmic reticulum, mitochondrion, plasma membrane | 25.0 | 39.13 |
| Bra019142.1-P | Field mustard | endoplasmic reticulum, mitochondrion, plasma membrane | 25.0 | 39.13 |
| AT4G31730.1 | Thale cress | endoplasmic reticulum, plasma membrane, plastid | 28.24 | 38.61 |
| KRH02920 | Soybean | endoplasmic reticulum, nucleus, plasma membrane | 28.7 | 37.8 |
| CDY68098 | Canola | endoplasmic reticulum, mitochondrion, plasma membrane | 23.61 | 36.96 |
| CDX94417 | Canola | endoplasmic reticulum, mitochondrion, plasma membrane | 23.61 | 36.96 |
| Bra013917.1-P | Field mustard | endoplasmic reticulum, mitochondrion, plasma membrane | 23.61 | 36.96 |
| PGSC0003DMT400067619 | Potato | mitochondrion | 31.02 | 36.81 |
| CDX68780 | Canola | mitochondrion | 28.24 | 36.75 |
| CDY34757 | Canola | endoplasmic reticulum, nucleus, plasma membrane | 25.46 | 36.67 |
| AT2G24762.1 | Thale cress | golgi, plasma membrane, plastid | 25.93 | 35.9 |
| PGSC0003DMT400075273 | Potato | cytosol, endoplasmic reticulum, plasma membrane, plastid | 25.0 | 35.76 |
| CDX76795 | Canola | golgi, mitochondrion, plastid | 24.54 | 35.33 |
| Bra007834.1-P | Field mustard | golgi, mitochondrion, plasma membrane | 24.54 | 35.33 |
| Solyc08g006520.1.1 | Tomato | cytosol, endoplasmic reticulum, plasma membrane, plastid | 28.24 | 34.27 |
| Solyc12g096480.1.1 | Tomato | plastid | 24.07 | 34.21 |
| Solyc12g096490.1.1 | Tomato | endoplasmic reticulum, plasma membrane, plastid | 25.93 | 34.15 |
| CDX72326 | Canola | endoplasmic reticulum, mitochondrion, plasma membrane | 25.46 | 33.54 |
| Bra011294.1-P | Field mustard | mitochondrion | 25.46 | 33.13 |
| Bra023987.1-P | Field mustard | endoplasmic reticulum, mitochondrion, plasma membrane, plastid | 25.0 | 32.93 |
| VIT_04s0008g07370.t01 | Wine grape | plastid | 25.93 | 32.75 |
| PGSC0003DMT400075274 | Potato | plastid | 21.3 | 29.3 |
| KRH18976 | Soybean | plasma membrane | 29.17 | 26.92 |
| Bra020423.1-P | Field mustard | cytosol | 12.5 | 24.77 |
Protein Annotations
| EnsemblPlants:TraesCS7D01G485300.1 | EnsemblPlantsGene:TraesCS7D01G485300 | PANTHER:PTHR33228 | PANTHER:PTHR33228:SF17 | SEG:seg | TMHMM:TMhelix |
| MapMan:35.2 | : | : | : | : | : |
Description
No Description!
Coordinates
chr7D:-:595586399..595587049
Molecular Weight (calculated)
22163.5 Da
IEP (calculated)
4.749
GRAVY (calculated)
-0.235
Length
216 amino acids
Sequence
(BLAST)
(BLAST)
001: MRPGAEFVAM SHRAGAPTVA PAQGLINGTV APHSPWQSPV PYLFGGLAAM LGLIAFALLI LACSYWKLSG YLDGDRDGQA TGDADGEKAS ASGAARPAMD
101: FLEHVVVIMA GDERPTFLAK PAVSRAAEVE LATAAAAASA LAGGEGQEKK VDETGSEASS HLGADSASPS RDHHDATSRS HVHDQDAAGQ SLDHHHDDQD
201: AASQSSSTTA LQESLQ
101: FLEHVVVIMA GDERPTFLAK PAVSRAAEVE LATAAAAASA LAGGEGQEKK VDETGSEASS HLGADSASPS RDHHDATSRS HVHDQDAAGQ SLDHHHDDQD
201: AASQSSSTTA LQESLQ
001: MEGRQYYPPR ENVEGNRTTM GGGPHSPWHS PVPYLFGGLA AMLGLIAFAL LILACSYWRL SGYLDGEENQ SRERDLEVGD VKPDKTAVKP VALPEKFLVI
101: MAGNVKPTYL ATPSVKTCTC DDDDDEDDDV EGSDQVVPRS SESNGETH
101: MAGNVKPTYL ATPSVKTCTC DDDDDEDDDV EGSDQVVPRS SESNGETH
Arabidopsis Description
GDU3Protein GLUTAMINE DUMPER 3 [Source:UniProtKB/Swiss-Prot;Acc:Q9FHH5]
SUBAcon: [endoplasmic reticulum,cytosol,plasma membrane]
SUBAcon: [endoplasmic reticulum,cytosol,plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.