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Maize
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Maize
Subcellular Localization
min:
: max

 
Winner_takes_all: extracellular, plasma membrane, endoplasmic reticulum

Predictor Summary:
  • plastid 1
  • endoplasmic reticulum 2
  • extracellular 2
  • golgi 1
  • plasma membrane 2
  • vacuole 1
Predictors GFP MS/MS Papers
Winner Takes All:endoplasmic reticulum, extracellular, plasma membrane
Any Predictor:plastid, secretory
iPSORT:plastid
MultiLoc:endoplasmic reticulum
PProwler:secretory
WoLF PSORT:extracellular
YLoc:plasma membrane
PPI

Inferred distinct locusB in Crop

locusBlocations
Zm00001d015671_P001
Zm00001d028475_P002

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT2G24762.1 Zm00001d015671_P001 AT3G09770.1 22291198
AT2G24762.1 Zm00001d028475_P002 AT3G09770.1 22291198
AT2G24762.1 Zm00001d015671_P001 AT5G03200.1 22291198
AT2G24762.1 Zm00001d028475_P002 AT5G03200.1 22291198
AT4G25760.1 Zm00001d015671_P001 AT3G09770.1 22291198
AT4G25760.1 Zm00001d028475_P002 AT3G09770.1 22291198
AT4G25760.1 Zm00001d015671_P001 AT3G53410.1 22291198
AT4G25760.1 Zm00001d028475_P002 AT3G53410.1 22291198
AT4G25760.1 Zm00001d015671_P001 AT5G03200.1 22291198
AT4G25760.1 Zm00001d028475_P002 AT5G03200.1 22291198
AT4G31730.1 Zm00001d015671_P001 AT3G09770.1 22291198
AT4G31730.1 Zm00001d028475_P002 AT3G09770.1 22291198
AT4G31730.1 Zm00001d015671_P001 AT3G09770.1 24036454
AT4G31730.1 Zm00001d028475_P002 AT3G09770.1 24036454
AT4G31730.1 Zm00001d015671_P001 AT5G03200.1 22291198
AT4G31730.1 Zm00001d028475_P002 AT5G03200.1 22291198
AT5G57685.1 Zm00001d015671_P001 AT3G09770.1 22291198
AT5G57685.1 Zm00001d028475_P002 AT3G09770.1 22291198
AT5G57685.1 Zm00001d015671_P001 AT3G53410.1 22291198
AT5G57685.1 Zm00001d028475_P002 AT3G53410.1 22291198
AT5G57685.1 Zm00001d015671_P001 AT5G03200.1 22291198
AT5G57685.1 Zm00001d028475_P002 AT5G03200.1 22291198
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Zm00001d046927_P001 Maize endoplasmic reticulum, mitochondrion, plasma membrane 64.14 50.54
Os06t0654400-00 Rice endoplasmic reticulum, nucleus, plasma membrane 60.69 47.83
EER88756 Sorghum endoplasmic reticulum, extracellular, plasma membrane 60.69 45.6
EER90144 Sorghum endoplasmic reticulum, plasma membrane, plastid 58.62 43.81
GSMUA_Achr7P16360_001 Banana endoplasmic reticulum, extracellular, plasma membrane 28.97 41.58
TraesCS7A01G497800.1 Wheat endoplasmic reticulum, nucleus, plasma membrane 58.62 41.26
AT4G25760.1 Thale cress cytosol, endoplasmic reticulum, plasma membrane 35.17 39.53
TraesCS7B01G404900.1 Wheat endoplasmic reticulum, nucleus, plasma membrane 58.62 39.35
TraesCS7A01G497900.1 Wheat endoplasmic reticulum 58.62 39.35
TraesCS7D01G485100.1 Wheat endoplasmic reticulum, nucleus, peroxisome 55.17 39.22
TraesCS7A01G498000.1 Wheat endoplasmic reticulum, mitochondrion, plasma membrane 53.1 38.69
CDY13451 Canola plasma membrane 34.48 38.46
Bra002705.1-P Field mustard endoplasmic reticulum, mitochondrion, plasma membrane 38.62 38.1
Bra002707.1-P Field mustard endoplasmic reticulum, mitochondrion, plasma membrane 38.62 38.1
TraesCS7D01G485300.1 Wheat endoplasmic reticulum, nucleus, plasma membrane 56.55 37.96
Zm00001d053729_P001 Maize plastid 37.93 37.93
HORVU1Hr1G003060.2 Barley endoplasmic reticulum, mitochondrion, plasma membrane 55.86 37.85
AT5G57685.1 Thale cress cytosol, endoplasmic reticulum, plasma membrane 38.62 37.84
AT2G24762.1 Thale cress golgi, plasma membrane, plastid 40.69 37.82
Bra006808.1-P Field mustard plasma membrane 37.93 37.67
CDX68780 Canola mitochondrion 42.76 37.35
Bra020422.1-P Field mustard endoplasmic reticulum, mitochondrion, plasma membrane 37.93 37.16
TraesCS7D01G485200.1 Wheat vacuole 54.48 37.09
HORVU7Hr1G111320.1 Barley endoplasmic reticulum, peroxisome, plastid 54.48 37.09
HORVU1Hr1G003070.1 Barley endoplasmic reticulum, peroxisome, plastid 54.48 37.09
CDX92732 Canola plasma membrane 34.48 37.04
Zm00001d032115_P001 Maize extracellular, golgi, plasma membrane 44.83 36.52
HORVU1Hr1G003080.1 Barley endoplasmic reticulum, nucleus, plasma membrane 54.48 36.41
HORVU7Hr1G111350.1 Barley endoplasmic reticulum, nucleus, plasma membrane 54.48 36.41
CDY72356 Canola endoplasmic reticulum, mitochondrion, plasma membrane 34.48 36.23
CDY68098 Canola endoplasmic reticulum, mitochondrion, plasma membrane 34.48 36.23
CDX94417 Canola endoplasmic reticulum, mitochondrion, plasma membrane 34.48 36.23
Bra013917.1-P Field mustard endoplasmic reticulum, mitochondrion, plasma membrane 34.48 36.23
Bra019142.1-P Field mustard endoplasmic reticulum, mitochondrion, plasma membrane 34.48 36.23
Zm00001d050079_P001 Maize extracellular, golgi, plasma membrane 46.9 35.79
CDY34757 Canola endoplasmic reticulum, nucleus, plasma membrane 36.55 35.33
Bra007834.1-P Field mustard golgi, mitochondrion, plasma membrane 36.55 35.33
VIT_04s0008g07370.t01 Wine grape plastid 41.38 35.09
AT4G31730.1 Thale cress endoplasmic reticulum, plasma membrane, plastid 37.93 34.81
KRH02920 Soybean endoplasmic reticulum, nucleus, plasma membrane 39.31 34.76
CDX76795 Canola golgi, mitochondrion, plastid 35.86 34.67
PGSC0003DMT400067619 Potato mitochondrion 42.76 34.07
Bra011294.1-P Field mustard mitochondrion 38.62 33.73
Zm00001d024198_P001 Maize plastid 40.69 33.71
CDX72326 Canola endoplasmic reticulum, mitochondrion, plasma membrane 37.93 33.54
TraesCS7B01G404600.1 Wheat endoplasmic reticulum 52.41 33.48
Solyc08g006520.1.1 Tomato cytosol, endoplasmic reticulum, plasma membrane, plastid 40.69 33.15
PGSC0003DMT400075273 Potato cytosol, endoplasmic reticulum, plasma membrane, plastid 33.79 32.45
Bra023987.1-P Field mustard endoplasmic reticulum, mitochondrion, plasma membrane, plastid 36.55 32.32
Solyc12g096480.1.1 Tomato plastid 33.79 32.24
Zm00001d015470_P001 Maize plastid 41.38 30.77
PGSC0003DMT400075274 Potato plastid 33.1 30.57
TraesCS7B01G404700.1 Wheat cytosol, endoplasmic reticulum, plastid 54.48 30.04
Solyc12g096490.1.1 Tomato endoplasmic reticulum, plasma membrane, plastid 33.79 29.88
Bra020423.1-P Field mustard cytosol 20.69 27.52
KRH18976 Soybean plasma membrane 39.31 24.36
Protein Annotations
EnsemblPlants:Zm00001d036703_P001EnsemblPlants:Zm00001d036703_T001EnsemblPlantsGene:Zm00001d036703GO:GO:0005575GO:GO:0016020GO:GO:0016021
PANTHER:PTHR33228PANTHER:PTHR33228:SF17ProteinID:AQK81746.1SEG:segTMHMM:TMhelixUniParc:UPI0008446589
UniProt:A0A1D6LQI3MapMan:35.2::::
Description
Protein GLUTAMINE DUMPER 5
Coordinates
chr6:-:98137322..98137759
Molecular Weight (calculated)
14429.2 Da
IEP (calculated)
5.051
GRAVY (calculated)
0.219
Length
145 amino acids
Sequence
(BLAST)
001: MMRPGAESFP TTSHGAPMAA PNSPWQSPVP YLFGGLAAML GLIALALLIL ACSYWKLSGY LDAGRDQRAA GEAGGAGAGA DGEKGSATGA ARPAAGVREH
101: VVVIMAGEDW PTFLATPAAS RAVAELGADA GTVSRSSASA MALAE
Best Arabidopsis Sequence Match ( AT2G24762.1 )
(BLAST)
001: MRPLSIKPTS LDVARHATSV ESFGNHRPPI SPWHSPVPYL FGGLAAMLGL IAFALLILAC SYWRLSTSGD DSGERVDEEK ESRSGVKAAS AACEEKVLVI
101: MAGDDLPRFL ATPAANKCMC GHEGRMVIFK EDGIGAGEEK MGDREKAKEN EETTSQ
Arabidopsis Description
GDU4Protein GLUTAMINE DUMPER 4 [Source:UniProtKB/Swiss-Prot;Acc:Q8S8A0]
SUBAcon: [golgi,plasma membrane,plastid]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.