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Maize
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Maize
Subcellular Localization
min:
: max

 
Winner_takes_all: plastid

Predictor Summary:
  • plastid 4
  • endoplasmic reticulum 2
  • extracellular 1
  • golgi 1
  • plasma membrane 1
  • vacuole 1
Predictors GFP MS/MS Papers
Winner Takes All:plastid
Any Predictor:plastid, secretory
ChloroP:plastid
iPSORT:plastid
MultiLoc:endoplasmic reticulum
PProwler:secretory
WoLF PSORT:plastid
YLoc:plastid
PPI

Inferred distinct locusB in Crop

locusBlocations
Zm00001d015671_P001
Zm00001d028475_P002

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT2G24762.1 Zm00001d015671_P001 AT3G09770.1 22291198
AT2G24762.1 Zm00001d028475_P002 AT3G09770.1 22291198
AT2G24762.1 Zm00001d015671_P001 AT5G03200.1 22291198
AT2G24762.1 Zm00001d028475_P002 AT5G03200.1 22291198
AT4G25760.1 Zm00001d015671_P001 AT3G09770.1 22291198
AT4G25760.1 Zm00001d028475_P002 AT3G09770.1 22291198
AT4G25760.1 Zm00001d015671_P001 AT3G53410.1 22291198
AT4G25760.1 Zm00001d028475_P002 AT3G53410.1 22291198
AT4G25760.1 Zm00001d015671_P001 AT5G03200.1 22291198
AT4G25760.1 Zm00001d028475_P002 AT5G03200.1 22291198
AT4G31730.1 Zm00001d015671_P001 AT3G09770.1 22291198
AT4G31730.1 Zm00001d028475_P002 AT3G09770.1 22291198
AT4G31730.1 Zm00001d015671_P001 AT3G09770.1 24036454
AT4G31730.1 Zm00001d028475_P002 AT3G09770.1 24036454
AT4G31730.1 Zm00001d015671_P001 AT5G03200.1 22291198
AT4G31730.1 Zm00001d028475_P002 AT5G03200.1 22291198
AT5G57685.1 Zm00001d015671_P001 AT3G09770.1 22291198
AT5G57685.1 Zm00001d028475_P002 AT3G09770.1 22291198
AT5G57685.1 Zm00001d015671_P001 AT3G53410.1 22291198
AT5G57685.1 Zm00001d028475_P002 AT3G53410.1 22291198
AT5G57685.1 Zm00001d015671_P001 AT5G03200.1 22291198
AT5G57685.1 Zm00001d028475_P002 AT5G03200.1 22291198
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Zm00001d036703_P001 Maize endoplasmic reticulum, extracellular, plasma membrane 37.93 37.93
GSMUA_Achr7P16360_001 Banana endoplasmic reticulum, extracellular, plasma membrane 26.21 37.62
CDY13451 Canola plasma membrane 31.72 35.38
AT4G25760.1 Thale cress cytosol, endoplasmic reticulum, plasma membrane 30.34 34.11
CDX92732 Canola plasma membrane 31.72 34.07
Bra006808.1-P Field mustard plasma membrane 33.79 33.56
Bra002705.1-P Field mustard endoplasmic reticulum, mitochondrion, plasma membrane 33.79 33.33
Bra002707.1-P Field mustard endoplasmic reticulum, mitochondrion, plasma membrane 33.79 33.33
Bra013917.1-P Field mustard endoplasmic reticulum, mitochondrion, plasma membrane 31.72 33.33
Bra019142.1-P Field mustard endoplasmic reticulum, mitochondrion, plasma membrane 31.72 33.33
CDY68098 Canola endoplasmic reticulum, mitochondrion, plasma membrane 31.72 33.33
CDX94417 Canola endoplasmic reticulum, mitochondrion, plasma membrane 31.72 33.33
CDY72356 Canola endoplasmic reticulum, mitochondrion, plasma membrane 31.03 32.61
Bra020422.1-P Field mustard endoplasmic reticulum, mitochondrion, plasma membrane 33.1 32.43
AT5G57685.1 Thale cress cytosol, endoplasmic reticulum, plasma membrane 33.1 32.43
TraesCS6A01G150800.1 Wheat endoplasmic reticulum, extracellular, plasma membrane 37.24 32.34
Bra007834.1-P Field mustard golgi, mitochondrion, plasma membrane 33.1 32.0
CDY34757 Canola endoplasmic reticulum, nucleus, plasma membrane 33.1 32.0
CDX76795 Canola golgi, mitochondrion, plastid 33.1 32.0
Zm00001d050079_P001 Maize extracellular, golgi, plasma membrane 41.38 31.58
Zm00001d046927_P001 Maize endoplasmic reticulum, mitochondrion, plasma membrane 40.0 31.52
TraesCS6B01G178900.1 Wheat endoplasmic reticulum, extracellular, plasma membrane 37.24 31.4
HORVU6Hr1G030050.2 Barley peroxisome, vacuole 40.0 31.35
KRH02920 Soybean endoplasmic reticulum, nucleus, plasma membrane 35.17 31.1
HORVU7Hr1G111310.2 Barley endoplasmic reticulum, mitochondrion, plasma membrane 38.62 30.94
AT2G24762.1 Thale cress golgi, plasma membrane, plastid 33.1 30.77
Bra023987.1-P Field mustard endoplasmic reticulum, mitochondrion, plasma membrane, plastid 34.48 30.49
CDX68780 Canola mitochondrion 34.48 30.12
TraesCS6D01G140800.1 Wheat endoplasmic reticulum, extracellular, plasma membrane 35.17 30.0
CDX72326 Canola endoplasmic reticulum, mitochondrion, plasma membrane 33.79 29.88
VIT_04s0008g07370.t01 Wine grape plastid 35.17 29.82
Zm00001d032115_P001 Maize extracellular, golgi, plasma membrane 36.55 29.78
Bra011294.1-P Field mustard mitochondrion 33.79 29.52
Zm00001d015470_P001 Maize plastid 39.31 29.23
Solyc08g006520.1.1 Tomato cytosol, endoplasmic reticulum, plasma membrane, plastid 35.17 28.65
TraesCS7A01G498100.1 Wheat endoplasmic reticulum 37.24 28.57
AT4G31730.1 Thale cress endoplasmic reticulum, plasma membrane, plastid 31.03 28.48
PGSC0003DMT400075273 Potato cytosol, endoplasmic reticulum, plasma membrane, plastid 29.66 28.48
Solyc12g096480.1.1 Tomato plastid 29.66 28.29
PGSC0003DMT400067619 Potato mitochondrion 34.48 27.47
TraesCS7B01G405000.1 Wheat endoplasmic reticulum, mitochondrion, plasma membrane 37.93 27.09
Zm00001d024198_P001 Maize plastid 32.41 26.86
TraesCS7D01G485400.1 Wheat golgi, mitochondrion, plasma membrane 36.55 25.98
Solyc12g096490.1.1 Tomato endoplasmic reticulum, plasma membrane, plastid 28.97 25.61
PGSC0003DMT400075274 Potato plastid 26.9 24.84
HORVU0Hr1G022370.1 Barley mitochondrion 39.31 23.08
KRH18976 Soybean plasma membrane 37.24 23.08
Bra020423.1-P Field mustard cytosol 17.24 22.94
Protein Annotations
EnsemblPlants:Zm00001d053729_P001EnsemblPlants:Zm00001d053729_T001EnsemblPlantsGene:Zm00001d053729GO:GO:0005575GO:GO:0016020GO:GO:0016021
PANTHER:PTHR33228PANTHER:PTHR33228:SF17ProteinID:AQK60229.1SEG:segTMHMM:TMhelixUniParc:UPI000221166D
UniProt:K7V6J5MapMan:35.2::::
Description
Protein GLUTAMINE DUMPER 5
Coordinates
chr4:-:240003935..240004372
Molecular Weight (calculated)
14402.1 Da
IEP (calculated)
5.089
GRAVY (calculated)
-0.103
Length
145 amino acids
Sequence
(BLAST)
001: MWPAGAEHPM GTGQGQGPAA PSPGSSASTA WQSPVPYYLF GGLAATLGLI ALSLLALACS HWKLSVSGGS LLPAGGPDDD GGGLERQDGG GKAAGERRRE
101: RVLVIMAGDE MPTFLATPAL GRGLDDARGG VGGVCGEDGR CGARS
Best Arabidopsis Sequence Match ( AT2G24762.1 )
(BLAST)
001: MRPLSIKPTS LDVARHATSV ESFGNHRPPI SPWHSPVPYL FGGLAAMLGL IAFALLILAC SYWRLSTSGD DSGERVDEEK ESRSGVKAAS AACEEKVLVI
101: MAGDDLPRFL ATPAANKCMC GHEGRMVIFK EDGIGAGEEK MGDREKAKEN EETTSQ
Arabidopsis Description
GDU4Protein GLUTAMINE DUMPER 4 [Source:UniProtKB/Swiss-Prot;Acc:Q8S8A0]
SUBAcon: [golgi,plasma membrane,plastid]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.