Factsheet for HORVU6Hr1G030050.2

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, vacuole

Predictor Summary:

vacuole 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	peroxisome, vacuole
Any Predictor:	peroxisome, vacuole
MultiLoc:	vacuole
YLoc:	peroxisome

PPI

Inferred distinct locusB in Crop

locusB	locations
HORVU0Hr1G008700.4
HORVU7Hr1G109550.2

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT2G24762.1	HORVU0Hr1G008700.4	AT3G09770.1	22291198
AT2G24762.1	HORVU7Hr1G109550.2	AT3G09770.1	22291198
AT2G24762.1	HORVU0Hr1G008700.4	AT5G03200.1	22291198
AT2G24762.1	HORVU7Hr1G109550.2	AT5G03200.1	22291198
AT4G25760.1	HORVU0Hr1G008700.4	AT3G09770.1	22291198
AT4G25760.1	HORVU7Hr1G109550.2	AT3G09770.1	22291198
AT4G25760.1	HORVU0Hr1G008700.4	AT3G53410.1	22291198
AT4G25760.1	HORVU7Hr1G109550.2	AT3G53410.1	22291198
AT4G25760.1	HORVU0Hr1G008700.4	AT5G03200.1	22291198
AT4G25760.1	HORVU7Hr1G109550.2	AT5G03200.1	22291198
AT4G31730.1	HORVU0Hr1G008700.4	AT3G09770.1	22291198
AT4G31730.1	HORVU7Hr1G109550.2	AT3G09770.1	22291198
AT4G31730.1	HORVU0Hr1G008700.4	AT3G09770.1	24036454
AT4G31730.1	HORVU7Hr1G109550.2	AT3G09770.1	24036454
AT4G31730.1	HORVU0Hr1G008700.4	AT5G03200.1	22291198
AT4G31730.1	HORVU7Hr1G109550.2	AT5G03200.1	22291198
AT5G57685.1	HORVU0Hr1G008700.4	AT3G09770.1	22291198
AT5G57685.1	HORVU7Hr1G109550.2	AT3G09770.1	22291198
AT5G57685.1	HORVU0Hr1G008700.4	AT3G53410.1	22291198
AT5G57685.1	HORVU7Hr1G109550.2	AT3G53410.1	22291198
AT5G57685.1	HORVU0Hr1G008700.4	AT5G03200.1	22291198
AT5G57685.1	HORVU7Hr1G109550.2	AT5G03200.1	22291198

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS6D01G140800.1	Wheat	endoplasmic reticulum, extracellular, plasma membrane	65.41	71.18
TraesCS6B01G178900.1	Wheat	endoplasmic reticulum, extracellular, plasma membrane	61.08	65.7
TraesCS6A01G150800.1	Wheat	endoplasmic reticulum, extracellular, plasma membrane	52.97	58.68
GSMUA_Achr7P16360_001	Banana	endoplasmic reticulum, extracellular, plasma membrane	22.7	41.58
HORVU7Hr1G111310.2	Barley	endoplasmic reticulum, mitochondrion, plasma membrane	40.54	41.44
Zm00001d053729_P001	Maize	plastid	31.35	40.0
CDY13451	Canola	plasma membrane	25.95	36.92
HORVU7Hr1G111320.1	Barley	endoplasmic reticulum, peroxisome, plastid	40.54	35.21
HORVU1Hr1G003070.1	Barley	endoplasmic reticulum, peroxisome, plastid	40.54	35.21
PGSC0003DMT400067619	Potato	mitochondrion	34.59	35.16
Bra006808.1-P	Field mustard	plasma membrane	27.57	34.93
AT4G25760.1	Thale cress	cytosol, endoplasmic reticulum, plasma membrane	24.32	34.88
CDY68098	Canola	endoplasmic reticulum, mitochondrion, plasma membrane	25.95	34.78
Bra013917.1-P	Field mustard	endoplasmic reticulum, mitochondrion, plasma membrane	25.95	34.78
KRH02920	Soybean	endoplasmic reticulum, nucleus, plasma membrane	30.81	34.76
CDX92732	Canola	plasma membrane	24.86	34.07
CDX94417	Canola	endoplasmic reticulum, mitochondrion, plasma membrane	25.41	34.06
CDY72356	Canola	endoplasmic reticulum, mitochondrion, plasma membrane	25.41	34.06
Bra019142.1-P	Field mustard	endoplasmic reticulum, mitochondrion, plasma membrane	25.41	34.06
CDX68780	Canola	mitochondrion	30.27	33.73
HORVU7Hr1G111350.1	Barley	endoplasmic reticulum, nucleus, plasma membrane	39.46	33.64
HORVU1Hr1G003080.1	Barley	endoplasmic reticulum, nucleus, plasma membrane	39.46	33.64
Bra002707.1-P	Field mustard	endoplasmic reticulum, mitochondrion, plasma membrane	26.49	33.33
Bra002705.1-P	Field mustard	endoplasmic reticulum, mitochondrion, plasma membrane	26.49	33.33
CDY34757	Canola	endoplasmic reticulum, nucleus, plasma membrane	27.03	33.33
Solyc08g006520.1.1	Tomato	cytosol, endoplasmic reticulum, plasma membrane, plastid	31.89	33.15
AT4G31730.1	Thale cress	endoplasmic reticulum, plasma membrane, plastid	28.11	32.91
VIT_04s0008g07370.t01	Wine grape	plastid	30.27	32.75
HORVU1Hr1G003060.2	Barley	endoplasmic reticulum, mitochondrion, plasma membrane	37.84	32.71
Bra023987.1-P	Field mustard	endoplasmic reticulum, mitochondrion, plasma membrane, plastid	28.65	32.32
EES06373	Sorghum	endoplasmic reticulum, nucleus, plasma membrane, plastid	34.59	31.68
Bra007834.1-P	Field mustard	golgi, mitochondrion, plasma membrane	25.41	31.33
Bra011294.1-P	Field mustard	mitochondrion	28.11	31.33
PGSC0003DMT400075273	Potato	cytosol, endoplasmic reticulum, plasma membrane, plastid	25.41	31.13
CDX72326	Canola	endoplasmic reticulum, mitochondrion, plasma membrane	27.57	31.1
AT5G57685.1	Thale cress	cytosol, endoplasmic reticulum, plasma membrane	24.86	31.08
Bra020422.1-P	Field mustard	endoplasmic reticulum, mitochondrion, plasma membrane	24.86	31.08
AT2G24762.1	Thale cress	golgi, plasma membrane, plastid	25.95	30.77
HORVU4Hr1G013760.1	Barley	golgi, mitochondrion, plasma membrane, plastid	30.81	30.32
CDX76795	Canola	golgi, mitochondrion, plastid	24.32	30.0
HORVU0Hr1G022370.1	Barley	mitochondrion	40.0	29.96
Zm00001d015470_P001	Maize	plastid	31.35	29.74
Solyc12g096490.1.1	Tomato	endoplasmic reticulum, plasma membrane, plastid	25.41	28.66
Solyc12g096480.1.1	Tomato	plastid	21.62	26.32
PGSC0003DMT400075274	Potato	plastid	21.62	25.48
KRH18976	Soybean	plasma membrane	29.19	23.08
Bra020423.1-P	Field mustard	cytosol	10.81	18.35

Protein Annotations

EMBL:AK359926	EMBL:AK366071	EnsemblPlants:HORVU6Hr1G030050.2	EnsemblPlantsGene:HORVU6Hr1G030050	GO:GO:0005575	GO:GO:0016020
GO:GO:0016021	PANTHER:PTHR33228	PANTHER:PTHR33228:SF17	SEG:seg	TMHMM:TMhelix	UniParc:UPI000B48641C
UniProt:A0A287TRV4	MapMan:35.2	:	:	:	:

Description

No Description!

Coordinates

chrchr6H:-:124115806..124116474

Molecular Weight (calculated)

18933.3 Da

IEP (calculated)

4.554

GRAVY (calculated)

-0.168

Length

185 amino acids

Sequence
(BLAST)

001: ADNTDSREAR TAVTGAPATH AMRPGAEYPM AHGPAAAPRS TWQTPVPYLF GGLAAMLGLI ALSLLTLACS YWKLSGGLAG PDEDQPAGSD GEKGSPSPPG
101: PAREWLRHVV VIMAGDEQPS FLATPASMTS RAADAGAETA DGATACCAAC RSEERKMADA REAGSEDGAQ SPSELIPRLG ILIVC

Best Arabidopsis Sequence Match ( AT4G25760.1 )
(BLAST)

001: MQTMEGRQYN YQDSINASSS MVVPHSPWHS PVPYLFGGLA AMLALICVAL LILACSYWRL SGSAERDLEA GDDAKPDNDT NKTKHTEMPE KFLVIMAGDV
101: RPTYLATPAT RSEQSCTCGD HNEEEGRRG

Arabidopsis Description

GDU2Protein GLUTAMINE DUMPER 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9SW07]
SUBAcon: [cytosol,plasma membrane,endoplasmic reticulum]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.