Factsheet for HORVU1Hr1G003060.2

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane, endoplasmic reticulum, mitochondrion

Predictor Summary:

mitochondrion 2
endoplasmic reticulum 1
plasma membrane 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum, mitochondrion, plasma membrane
Any Predictor:	endoplasmic reticulum, mitochondrion, plasma membrane
iPSORT:	mitochondrion
MultiLoc:	endoplasmic reticulum
WoLF PSORT:	mitochondrion
YLoc:	plasma membrane

PPI

Inferred distinct locusB in Crop

locusB	locations
HORVU0Hr1G008700.4
HORVU7Hr1G109550.2

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT2G24762.1	HORVU0Hr1G008700.4	AT3G09770.1	22291198
AT2G24762.1	HORVU7Hr1G109550.2	AT3G09770.1	22291198
AT2G24762.1	HORVU0Hr1G008700.4	AT5G03200.1	22291198
AT2G24762.1	HORVU7Hr1G109550.2	AT5G03200.1	22291198
AT4G25760.1	HORVU0Hr1G008700.4	AT3G09770.1	22291198
AT4G25760.1	HORVU7Hr1G109550.2	AT3G09770.1	22291198
AT4G25760.1	HORVU0Hr1G008700.4	AT3G53410.1	22291198
AT4G25760.1	HORVU7Hr1G109550.2	AT3G53410.1	22291198
AT4G25760.1	HORVU0Hr1G008700.4	AT5G03200.1	22291198
AT4G25760.1	HORVU7Hr1G109550.2	AT5G03200.1	22291198
AT4G31730.1	HORVU0Hr1G008700.4	AT3G09770.1	22291198
AT4G31730.1	HORVU7Hr1G109550.2	AT3G09770.1	22291198
AT4G31730.1	HORVU0Hr1G008700.4	AT3G09770.1	24036454
AT4G31730.1	HORVU7Hr1G109550.2	AT3G09770.1	24036454
AT4G31730.1	HORVU0Hr1G008700.4	AT5G03200.1	22291198
AT4G31730.1	HORVU7Hr1G109550.2	AT5G03200.1	22291198
AT5G57685.1	HORVU0Hr1G008700.4	AT3G09770.1	22291198
AT5G57685.1	HORVU7Hr1G109550.2	AT3G09770.1	22291198
AT5G57685.1	HORVU0Hr1G008700.4	AT3G53410.1	22291198
AT5G57685.1	HORVU7Hr1G109550.2	AT3G53410.1	22291198
AT5G57685.1	HORVU0Hr1G008700.4	AT5G03200.1	22291198
AT5G57685.1	HORVU7Hr1G109550.2	AT5G03200.1	22291198

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7A01G497900.1	Wheat	endoplasmic reticulum	83.18	82.41
TraesCS7D01G485300.1	Wheat	endoplasmic reticulum, nucleus, plasma membrane	77.57	76.85
TraesCS7B01G404900.1	Wheat	endoplasmic reticulum, nucleus, plasma membrane	77.1	76.39
HORVU0Hr1G022370.1	Barley	mitochondrion	82.24	71.26
HORVU7Hr1G111350.1	Barley	endoplasmic reticulum, nucleus, plasma membrane	65.89	64.98
HORVU1Hr1G003080.1	Barley	endoplasmic reticulum, nucleus, plasma membrane	65.89	64.98
Zm00001d036703_P001	Maize	endoplasmic reticulum, extracellular, plasma membrane	37.85	55.86
HORVU7Hr1G111310.2	Barley	endoplasmic reticulum, mitochondrion, plasma membrane	44.39	52.49
Os06t0654400-00	Rice	endoplasmic reticulum, nucleus, plasma membrane	42.99	50.0
HORVU7Hr1G111320.1	Barley	endoplasmic reticulum, peroxisome, plastid	49.53	49.77
HORVU1Hr1G003070.1	Barley	endoplasmic reticulum, peroxisome, plastid	49.53	49.77
EER90144	Sorghum	endoplasmic reticulum, plasma membrane, plastid	44.86	49.48
Zm00001d046927_P001	Maize	endoplasmic reticulum, mitochondrion, plasma membrane	41.59	48.37
EER88756	Sorghum	endoplasmic reticulum, extracellular, plasma membrane	43.46	48.19
GSMUA_Achr7P16360_001	Banana	endoplasmic reticulum, extracellular, plasma membrane	22.43	47.52
Bra006808.1-P	Field mustard	plasma membrane	28.04	41.1
AT5G57685.1	Thale cress	cytosol, endoplasmic reticulum, plasma membrane	28.04	40.54
AT4G25760.1	Thale cress	cytosol, endoplasmic reticulum, plasma membrane	24.3	40.31
Bra002707.1-P	Field mustard	endoplasmic reticulum, mitochondrion, plasma membrane	27.57	40.14
Bra002705.1-P	Field mustard	endoplasmic reticulum, mitochondrion, plasma membrane	27.57	40.14
KRH02920	Soybean	endoplasmic reticulum, nucleus, plasma membrane	29.91	39.02
Bra020422.1-P	Field mustard	endoplasmic reticulum, mitochondrion, plasma membrane	26.64	38.51
CDX68780	Canola	mitochondrion	29.44	37.95
HORVU6Hr1G030050.2	Barley	peroxisome, vacuole	32.71	37.84
CDX92732	Canola	plasma membrane	23.83	37.78
CDY13451	Canola	plasma membrane	22.9	37.69
CDY72356	Canola	endoplasmic reticulum, mitochondrion, plasma membrane	24.3	37.68
Bra019142.1-P	Field mustard	endoplasmic reticulum, mitochondrion, plasma membrane	24.3	37.68
AT4G31730.1	Thale cress	endoplasmic reticulum, plasma membrane, plastid	27.1	36.71
CDY34757	Canola	endoplasmic reticulum, nucleus, plasma membrane	25.7	36.67
CDX76795	Canola	golgi, mitochondrion, plastid	25.7	36.67
PGSC0003DMT400075273	Potato	cytosol, endoplasmic reticulum, plasma membrane, plastid	25.7	36.42
PGSC0003DMT400067619	Potato	mitochondrion	30.84	36.26
CDY68098	Canola	endoplasmic reticulum, mitochondrion, plasma membrane	23.36	36.23
Bra013917.1-P	Field mustard	endoplasmic reticulum, mitochondrion, plasma membrane	23.36	36.23
CDX94417	Canola	endoplasmic reticulum, mitochondrion, plasma membrane	23.36	36.23
Bra007834.1-P	Field mustard	golgi, mitochondrion, plasma membrane	25.23	36.0
AT2G24762.1	Thale cress	golgi, plasma membrane, plastid	25.7	35.26
VIT_04s0008g07370.t01	Wine grape	plastid	27.57	34.5
Solyc12g096480.1.1	Tomato	plastid	24.3	34.21
Solyc12g096490.1.1	Tomato	endoplasmic reticulum, plasma membrane, plastid	26.17	34.15
Solyc08g006520.1.1	Tomato	cytosol, endoplasmic reticulum, plasma membrane, plastid	28.04	33.71
CDX72326	Canola	endoplasmic reticulum, mitochondrion, plasma membrane	25.23	32.93
Bra011294.1-P	Field mustard	mitochondrion	25.23	32.53
PGSC0003DMT400075274	Potato	plastid	23.83	32.48
HORVU4Hr1G013760.1	Barley	golgi, mitochondrion, plasma membrane, plastid	28.5	32.45
Bra023987.1-P	Field mustard	endoplasmic reticulum, mitochondrion, plasma membrane, plastid	24.77	32.32
KRH18976	Soybean	plasma membrane	28.04	25.64
Bra020423.1-P	Field mustard	cytosol	12.15	23.85

Protein Annotations

EnsemblPlants:HORVU1Hr1G003060.2	EnsemblPlantsGene:HORVU1Hr1G003060	GO:GO:0005575	GO:GO:0016020	GO:GO:0016021	PANTHER:PTHR33228
PANTHER:PTHR33228:SF17	SEG:seg	TMHMM:TMhelix	UniParc:UPI000B480193	UniProt:A0A287EH18	MapMan:35.2

Description

No Description!

Coordinates

chrchr1H:+:6408841..6409648

Molecular Weight (calculated)

22238.4 Da

IEP (calculated)

5.223

GRAVY (calculated)

-0.405

Length

214 amino acids

Sequence
(BLAST)

001: MRPGAEFVAM SHRAGAPTAA PGHGLINGTV APHSPWQSPV PYLFGGLAAM LGLIAFALLI LACSYWKLSG YLDGDRDGQA TGDADGEKAS ASGAARPAMD
101: FLEHVVVIMA GDERPTFLAK PAASRAAEVE LATAAAAGSA LAGSEEQEKR VDEQGSEASS HLGADSASPS RDHHDATSRS RVHDQDAASQ SRDHHHHDDH
201: DHESSSTTAL QESS

Best Arabidopsis Sequence Match ( AT5G57685.1 )
(BLAST)

001: MEGRQYYPPR ENVEGNRTTM GGGPHSPWHS PVPYLFGGLA AMLGLIAFAL LILACSYWRL SGYLDGEENQ SRERDLEVGD VKPDKTAVKP VALPEKFLVI
101: MAGNVKPTYL ATPSVKTCTC DDDDDEDDDV EGSDQVVPRS SESNGETH

Arabidopsis Description

GDU3Protein GLUTAMINE DUMPER 3 [Source:UniProtKB/Swiss-Prot;Acc:Q9FHH5]
SUBAcon: [cytosol,plasma membrane,endoplasmic reticulum]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.