Factsheet for Os06t0654400-00

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum, nucleus, plasma membrane

Predictor Summary:

nucleus 3
plastid 1
endoplasmic reticulum 2
extracellular 1
vacuole 1
plasma membrane 2
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum, nucleus, plasma membrane
Any Predictor:	nucleus, plastid, secretory
BaCelLo:	nucleus
iPSORT:	plastid
MultiLoc:	endoplasmic reticulum
Plant-mPloc:	nucleus
PProwler:	secretory
WoLF PSORT:	nucleus
YLoc:	plasma membrane

PPI

Inferred distinct locusB in Crop

locusB	locations
Os01t0374900-01
Os03t0254900-02
Os10t0204100-01

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT2G24762.1	Os01t0374900-01	AT3G09770.1	22291198
AT2G24762.1	Os03t0254900-02	AT3G09770.1	22291198
AT2G24762.1	Os10t0204100-01	AT3G09770.1	22291198
AT2G24762.1	Os01t0374900-01	AT5G03200.1	22291198
AT2G24762.1	Os03t0254900-02	AT5G03200.1	22291198
AT2G24762.1	Os10t0204100-01	AT5G03200.1	22291198
AT4G25760.1	Os01t0374900-01	AT3G09770.1	22291198
AT4G25760.1	Os03t0254900-02	AT3G09770.1	22291198
AT4G25760.1	Os10t0204100-01	AT3G09770.1	22291198
AT4G25760.1	Os01t0374900-01	AT3G53410.1	22291198
AT4G25760.1	Os03t0254900-02	AT3G53410.1	22291198
AT4G25760.1	Os10t0204100-01	AT3G53410.1	22291198
AT4G25760.1	Os01t0374900-01	AT5G03200.1	22291198
AT4G25760.1	Os03t0254900-02	AT5G03200.1	22291198
AT4G25760.1	Os10t0204100-01	AT5G03200.1	22291198
AT4G31730.1	Os01t0374900-01	AT3G09770.1	22291198
AT4G31730.1	Os03t0254900-02	AT3G09770.1	22291198
AT4G31730.1	Os10t0204100-01	AT3G09770.1	22291198
AT4G31730.1	Os01t0374900-01	AT3G09770.1	24036454
AT4G31730.1	Os03t0254900-02	AT3G09770.1	24036454
AT4G31730.1	Os10t0204100-01	AT3G09770.1	24036454
AT4G31730.1	Os01t0374900-01	AT5G03200.1	22291198
AT4G31730.1	Os03t0254900-02	AT5G03200.1	22291198
AT4G31730.1	Os10t0204100-01	AT5G03200.1	22291198
AT5G57685.1	Os01t0374900-01	AT3G09770.1	22291198
AT5G57685.1	Os03t0254900-02	AT3G09770.1	22291198
AT5G57685.1	Os10t0204100-01	AT3G09770.1	22291198
AT5G57685.1	Os01t0374900-01	AT3G53410.1	22291198
AT5G57685.1	Os03t0254900-02	AT3G53410.1	22291198
AT5G57685.1	Os10t0204100-01	AT3G53410.1	22291198
AT5G57685.1	Os01t0374900-01	AT5G03200.1	22291198
AT5G57685.1	Os03t0254900-02	AT5G03200.1	22291198
AT5G57685.1	Os10t0204100-01	AT5G03200.1	22291198

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d036703_P001	Maize	endoplasmic reticulum, extracellular, plasma membrane	47.83	60.69
Zm00001d046927_P001	Maize	endoplasmic reticulum, mitochondrion, plasma membrane	52.17	52.17
TraesCS7A01G497800.1	Wheat	endoplasmic reticulum, nucleus, plasma membrane	53.26	47.57
GSMUA_Achr7P16360_001	Banana	endoplasmic reticulum, extracellular, plasma membrane	26.09	47.52
TraesCS7D01G485100.1	Wheat	endoplasmic reticulum, nucleus, peroxisome	52.17	47.06
EER90144	Sorghum	endoplasmic reticulum, plasma membrane, plastid	48.91	46.39
EER88756	Sorghum	endoplasmic reticulum, extracellular, plasma membrane	47.83	45.6
TraesCS7A01G497900.1	Wheat	endoplasmic reticulum	53.26	45.37
HORVU7Hr1G111320.1	Barley	endoplasmic reticulum, peroxisome, plastid	52.17	45.07
HORVU1Hr1G003070.1	Barley	endoplasmic reticulum, peroxisome, plastid	52.17	45.07
TraesCS7B01G404900.1	Wheat	endoplasmic reticulum, nucleus, plasma membrane	52.72	44.91
Bra006808.1-P	Field mustard	plasma membrane	34.78	43.84
HORVU1Hr1G003060.2	Barley	endoplasmic reticulum, mitochondrion, plasma membrane	50.0	42.99
Bra002705.1-P	Field mustard	endoplasmic reticulum, mitochondrion, plasma membrane	34.24	42.86
Bra002707.1-P	Field mustard	endoplasmic reticulum, mitochondrion, plasma membrane	34.24	42.86
TraesCS7D01G485300.1	Wheat	endoplasmic reticulum, nucleus, plasma membrane	50.0	42.59
Os08t0446800-01	Rice	endoplasmic reticulum, extracellular, plasma membrane	41.3	42.22
HORVU7Hr1G111350.1	Barley	endoplasmic reticulum, nucleus, plasma membrane	49.46	41.94
HORVU1Hr1G003080.1	Barley	endoplasmic reticulum, nucleus, plasma membrane	49.46	41.94
TraesCS7A01G498000.1	Wheat	endoplasmic reticulum, mitochondrion, plasma membrane	45.11	41.71
CDY13451	Canola	plasma membrane	29.35	41.54
Bra020422.1-P	Field mustard	endoplasmic reticulum, mitochondrion, plasma membrane	33.15	41.22
AT5G57685.1	Thale cress	cytosol, endoplasmic reticulum, plasma membrane	33.15	41.22
AT2G24762.1	Thale cress	golgi, plasma membrane, plastid	34.24	40.38
CDY68098	Canola	endoplasmic reticulum, mitochondrion, plasma membrane	29.89	39.86
Bra013917.1-P	Field mustard	endoplasmic reticulum, mitochondrion, plasma membrane	29.89	39.86
AT4G25760.1	Thale cress	cytosol, endoplasmic reticulum, plasma membrane	27.72	39.53
VIT_04s0008g07370.t01	Wine grape	plastid	36.41	39.18
CDX94417	Canola	endoplasmic reticulum, mitochondrion, plasma membrane	29.35	39.13
KRH02920	Soybean	endoplasmic reticulum, nucleus, plasma membrane	34.78	39.02
TraesCS7D01G485200.1	Wheat	vacuole	45.11	38.97
TraesCS7B01G404600.1	Wheat	endoplasmic reticulum	47.83	38.77
CDY34757	Canola	endoplasmic reticulum, nucleus, plasma membrane	30.98	38.0
AT4G31730.1	Thale cress	endoplasmic reticulum, plasma membrane, plastid	32.61	37.97
CDY72356	Canola	endoplasmic reticulum, mitochondrion, plasma membrane	28.26	37.68
Bra019142.1-P	Field mustard	endoplasmic reticulum, mitochondrion, plasma membrane	28.26	37.68
PGSC0003DMT400067619	Potato	mitochondrion	36.96	37.36
Bra007834.1-P	Field mustard	golgi, mitochondrion, plasma membrane	30.43	37.33
CDX76795	Canola	golgi, mitochondrion, plastid	30.43	37.33
CDX92732	Canola	plasma membrane	27.17	37.04
CDX72326	Canola	endoplasmic reticulum, mitochondrion, plasma membrane	32.61	36.59
Bra023987.1-P	Field mustard	endoplasmic reticulum, mitochondrion, plasma membrane, plastid	32.07	35.98
TraesCS7B01G404700.1	Wheat	cytosol, endoplasmic reticulum, plastid	50.54	35.36
Bra011294.1-P	Field mustard	mitochondrion	31.52	34.94
Solyc12g096480.1.1	Tomato	plastid	28.8	34.87
Solyc08g006520.1.1	Tomato	cytosol, endoplasmic reticulum, plasma membrane, plastid	33.7	34.83
PGSC0003DMT400075273	Potato	cytosol, endoplasmic reticulum, plasma membrane, plastid	28.26	34.44
PGSC0003DMT400075274	Potato	plastid	28.8	33.76
CDX68780	Canola	mitochondrion	29.89	33.13
Os08t0249200-00	Rice	plastid	35.33	32.99
Solyc12g096490.1.1	Tomato	endoplasmic reticulum, plasma membrane, plastid	28.8	32.32
KRH18976	Soybean	plasma membrane	35.33	27.78
Bra020423.1-P	Field mustard	cytosol	15.76	26.61

Protein Annotations

EnsemblPlants:Os06t0654400-00	EnsemblPlantsGene:Os06g0654400	EntrezGene:107277980	GO:GO:0005575	GO:GO:0016020	GO:GO:0016021
PANTHER:PTHR33228	PANTHER:PTHR33228:SF17	ProteinID:BAD37548.1	ProteinID:BAS98930.1	ProteinID:EEE66141.1	RefSeq:XP_015641841.1
SEG:seg	TMHMM:TMhelix	UniParc:UPI00004262FC	UniProt:Q67WC1	MapMan:35.2	:

Description

Hypothetical conserved gene. (Os06t0654400-00)

Coordinates

chr6:+:26829535..26830408

Molecular Weight (calculated)

18738.7 Da

IEP (calculated)

4.820

GRAVY (calculated)

-0.241

Length

184 amino acids

Sequence
(BLAST)

001: MRPVAELASA PASYAHAANG TAAHSPWQSP VPYLFGGLAA MLGLIAFALL ILACSYWKLS GYLDGGSGNG QASGSAAAGE GAEGEKGSAA GAARPALGFR
101: EHVVVIMAGD ERPTFLAMPA TSRPAVELGA APVASSCGCS HSEEEKKVEE VSSPPPPSER DADDDAASRR HESSSNTRQQ ESSQ

Best Arabidopsis Sequence Match ( AT5G57685.1 )
(BLAST)

001: MEGRQYYPPR ENVEGNRTTM GGGPHSPWHS PVPYLFGGLA AMLGLIAFAL LILACSYWRL SGYLDGEENQ SRERDLEVGD VKPDKTAVKP VALPEKFLVI
101: MAGNVKPTYL ATPSVKTCTC DDDDDEDDDV EGSDQVVPRS SESNGETH

Arabidopsis Description

GDU3Protein GLUTAMINE DUMPER 3 [Source:UniProtKB/Swiss-Prot;Acc:Q9FHH5]
SUBAcon: [endoplasmic reticulum,cytosol,plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.