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Field mustard
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Field mustard
Subcellular Localization
min:
: max

 
Winner_takes_all: mitochondrion, endoplasmic reticulum, plasma membrane

Predictor Summary:
  • nucleus 2
  • mitochondrion 2
  • endoplasmic reticulum 2
  • extracellular 1
  • vacuole 1
  • plasma membrane 2
  • golgi 1
Predictors GFP MS/MS Papers
Winner Takes All:endoplasmic reticulum, mitochondrion, plasma membrane
Any Predictor:mitochondrion, nucleus, secretory
BaCelLo:nucleus
iPSORT:mitochondrion
MultiLoc:endoplasmic reticulum
Plant-mPloc:nucleus
PProwler:secretory
WoLF PSORT:mitochondrion
YLoc:plasma membrane
PPI

Inferred distinct locusB in Crop

locusBlocations
Bra003133.1-P
Bra009546.1-P
Bra028846.1-P
Bra029788.1-P
Bra034086.1-P

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT4G25760.1 Bra029788.1-P AT3G09770.1 22291198
AT4G25760.1 Bra034086.1-P AT3G09770.1 22291198
AT4G25760.1 Bra003133.1-P AT3G53410.1 22291198
AT4G25760.1 Bra009546.1-P AT5G03200.1 22291198
AT4G25760.1 Bra028846.1-P AT5G03200.1 22291198
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY68098 Canola endoplasmic reticulum, mitochondrion, plasma membrane 98.55 98.55
Bra019142.1-P Field mustard endoplasmic reticulum, mitochondrion, plasma membrane 83.33 83.33
AT4G25760.1 Thale cress cytosol, endoplasmic reticulum, plasma membrane 73.19 78.29
Bra006808.1-P Field mustard plasma membrane 52.17 49.32
Bra002705.1-P Field mustard endoplasmic reticulum, mitochondrion, plasma membrane 48.55 45.58
Bra002707.1-P Field mustard endoplasmic reticulum, mitochondrion, plasma membrane 48.55 45.58
Bra020422.1-P Field mustard endoplasmic reticulum, mitochondrion, plasma membrane 47.83 44.59
Bra020423.1-P Field mustard cytosol 29.71 37.61
Bra007834.1-P Field mustard golgi, mitochondrion, plasma membrane 40.58 37.33
TraesCS4B01G081100.1 Wheat endoplasmic reticulum, extracellular, plasma membrane 42.75 36.65
GSMUA_Achr7P16360_001 Banana endoplasmic reticulum, extracellular, plasma membrane 26.81 36.63
Bra009804.1-P Field mustard extracellular 26.09 36.0
KRH02920 Soybean endoplasmic reticulum, nucleus, plasma membrane 42.75 35.98
Bra023987.1-P Field mustard endoplasmic reticulum, mitochondrion, plasma membrane, plastid 41.3 34.76
Zm00001d036703_P001 Maize endoplasmic reticulum, extracellular, plasma membrane 36.23 34.48
EES13936 Sorghum endoplasmic reticulum, extracellular, plasma membrane 44.2 34.46
GSMUA_Achr1P23400_001 Banana cytosol, mitochondrion, plasma membrane 38.41 33.76
Bra011294.1-P Field mustard mitochondrion 40.58 33.73
GSMUA_Achr7P05080_001 Banana endoplasmic reticulum, plasma membrane, plastid 36.23 33.56
TraesCS4D01G079800.1 Wheat endoplasmic reticulum, extracellular, plasma membrane 39.13 33.13
TraesCS4A01G234200.1 Wheat endoplasmic reticulum, extracellular, plasma membrane 40.58 32.94
GSMUA_Achr11P... Banana extracellular, golgi, mitochondrion, plastid 36.23 32.89
Os08t0446800-01 Rice endoplasmic reticulum, extracellular, plasma membrane 42.75 32.78
Zm00001d046927_P001 Maize endoplasmic reticulum, mitochondrion, plasma membrane 42.75 32.07
Zm00001d053729_P001 Maize plastid 33.33 31.72
Zm00001d032115_P001 Maize extracellular, golgi, plasma membrane 40.58 31.46
VIT_04s0008g07370.t01 Wine grape plastid 38.41 30.99
GSMUA_Achr10P... Banana golgi, plasma membrane, plastid 37.68 30.95
HORVU4Hr1G013760.1 Barley golgi, mitochondrion, plasma membrane, plastid 42.03 30.85
Zm00001d050079_P001 Maize extracellular, golgi, plasma membrane 41.3 30.0
Os06t0654400-00 Rice endoplasmic reticulum, nucleus, plasma membrane 39.86 29.89
HORVU7Hr1G111310.2 Barley endoplasmic reticulum, mitochondrion, plasma membrane 37.68 28.73
TraesCS7A01G498100.1 Wheat endoplasmic reticulum 38.41 28.04
TraesCS6B01G178900.1 Wheat endoplasmic reticulum, extracellular, plasma membrane 34.78 27.91
TraesCS6A01G150800.1 Wheat endoplasmic reticulum, extracellular, plasma membrane 33.33 27.54
TraesCS7B01G405000.1 Wheat endoplasmic reticulum, mitochondrion, plasma membrane 39.13 26.6
TraesCS7D01G485400.1 Wheat golgi, mitochondrion, plasma membrane 39.13 26.47
TraesCS6D01G140800.1 Wheat endoplasmic reticulum, extracellular, plasma membrane 32.61 26.47
EER88756 Sorghum endoplasmic reticulum, extracellular, plasma membrane 36.96 26.42
HORVU6Hr1G030050.2 Barley peroxisome, vacuole 34.78 25.95
EES06373 Sorghum endoplasmic reticulum, nucleus, plasma membrane, plastid 37.68 25.74
EER90144 Sorghum endoplasmic reticulum, plasma membrane, plastid 35.51 25.26
KRH18976 Soybean plasma membrane 42.75 25.21
EES13610 Sorghum plastid 32.61 24.86
TraesCS7D01G485200.1 Wheat vacuole 37.68 24.41
TraesCS7A01G497800.1 Wheat endoplasmic reticulum, nucleus, plasma membrane 36.23 24.27
TraesCS7A01G497900.1 Wheat endoplasmic reticulum 37.68 24.07
TraesCS7A01G498000.1 Wheat endoplasmic reticulum, mitochondrion, plasma membrane 34.06 23.62
TraesCS7D01G485300.1 Wheat endoplasmic reticulum, nucleus, plasma membrane 36.96 23.61
TraesCS7B01G404900.1 Wheat endoplasmic reticulum, nucleus, plasma membrane 36.96 23.61
Zm00001d024198_P001 Maize plastid 29.71 23.43
HORVU1Hr1G003060.2 Barley endoplasmic reticulum, mitochondrion, plasma membrane 36.23 23.36
Zm00001d015470_P001 Maize plastid 32.61 23.08
TraesCS7D01G485100.1 Wheat endoplasmic reticulum, nucleus, peroxisome 34.06 23.04
HORVU1Hr1G003070.1 Barley endoplasmic reticulum, peroxisome, plastid 35.51 23.0
HORVU7Hr1G111320.1 Barley endoplasmic reticulum, peroxisome, plastid 35.51 23.0
Os08t0249200-00 Rice plastid 31.88 22.34
HORVU7Hr1G111350.1 Barley endoplasmic reticulum, nucleus, plasma membrane 34.78 22.12
HORVU1Hr1G003080.1 Barley endoplasmic reticulum, nucleus, plasma membrane 34.78 22.12
TraesCS7B01G404600.1 Wheat endoplasmic reticulum 34.06 20.7
HORVU0Hr1G022370.1 Barley mitochondrion 35.51 19.84
TraesCS7B01G404700.1 Wheat cytosol, endoplasmic reticulum, plastid 35.51 18.63
Protein Annotations
EnsemblPlants:Bra013917.1EnsemblPlants:Bra013917.1-PEnsemblPlantsGene:Bra013917GO:GO:0005575GO:GO:0016020GO:GO:0016021
PANTHER:PTHR33228PANTHER:PTHR33228:SF5SEG:segTMHMM:TMhelixUniParc:UPI0002546A14UniProt:M4DBQ7
MapMan:35.1:::::
Description
AT4G25760 (E=2e-037) ATGDU2, GDU2 | AtGDU2 (Arabidopsis thaliana GLUTAMINE DUMPER 2)
Coordinates
chrA01:+:8435798..8436214
Molecular Weight (calculated)
15087.7 Da
IEP (calculated)
5.539
GRAVY (calculated)
-0.476
Length
138 amino acids
Sequence
(BLAST)
001: MQTMEGRQYY QNPEGNNHSS SMVVPHSPWH SPVPYLFGGL AAMLALIAFS LLILACSYWR LTGSAERDLE AGDDAKPEGD THKTKTTELP EKFLVIMAGD
101: VKPTYLATPA NRSEQSCTCG DHKEEAGSNQ VLRQSTGT
Best Arabidopsis Sequence Match ( AT4G25760.1 )
(BLAST)
001: MQTMEGRQYN YQDSINASSS MVVPHSPWHS PVPYLFGGLA AMLALICVAL LILACSYWRL SGSAERDLEA GDDAKPDNDT NKTKHTEMPE KFLVIMAGDV
101: RPTYLATPAT RSEQSCTCGD HNEEEGRRG
Arabidopsis Description
GDU2Protein GLUTAMINE DUMPER 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9SW07]
SUBAcon: [endoplasmic reticulum,cytosol,plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.