Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane, golgi, extracellular
Predictor Summary:
Predictor Summary:
- extracellular 4
- endoplasmic reticulum 3
- vacuole 3
- plasma membrane 4
- golgi 4
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| Zm00001d015671_P001 | |
| Zm00001d028475_P002 |
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Os08t0446800-01 | Rice | endoplasmic reticulum, extracellular, plasma membrane | 56.18 | 55.56 |
| Zm00001d050079_P001 | Maize | extracellular, golgi, plasma membrane | 58.99 | 55.26 |
| TraesCS4D01G079800.1 | Wheat | endoplasmic reticulum, extracellular, plasma membrane | 49.44 | 53.99 |
| TraesCS4A01G234200.1 | Wheat | endoplasmic reticulum, extracellular, plasma membrane | 51.12 | 53.53 |
| TraesCS4B01G081100.1 | Wheat | endoplasmic reticulum, extracellular, plasma membrane | 47.75 | 52.8 |
| EES13936 | Sorghum | endoplasmic reticulum, extracellular, plasma membrane | 51.69 | 51.98 |
| HORVU4Hr1G013760.1 | Barley | golgi, mitochondrion, plasma membrane, plastid | 52.81 | 50.0 |
| Zm00001d036703_P001 | Maize | endoplasmic reticulum, extracellular, plasma membrane | 36.52 | 44.83 |
| GSMUA_Achr11P... | Banana | extracellular, golgi, mitochondrion, plastid | 38.2 | 44.74 |
| Bra006808.1-P | Field mustard | plasma membrane | 36.52 | 44.52 |
| Bra020422.1-P | Field mustard | endoplasmic reticulum, mitochondrion, plasma membrane | 36.52 | 43.92 |
| Bra002705.1-P | Field mustard | endoplasmic reticulum, mitochondrion, plasma membrane | 35.96 | 43.54 |
| Bra002707.1-P | Field mustard | endoplasmic reticulum, mitochondrion, plasma membrane | 35.96 | 43.54 |
| Bra019142.1-P | Field mustard | endoplasmic reticulum, mitochondrion, plasma membrane | 33.71 | 43.48 |
| CDY72356 | Canola | endoplasmic reticulum, mitochondrion, plasma membrane | 33.71 | 43.48 |
| AT5G57685.1 | Thale cress | cytosol, endoplasmic reticulum, plasma membrane | 35.96 | 43.24 |
| CDY13451 | Canola | plasma membrane | 31.46 | 43.08 |
| VIT_04s0008g07370.t01 | Wine grape | plastid | 39.89 | 41.52 |
| CDX92732 | Canola | plasma membrane | 31.46 | 41.48 |
| AT4G25760.1 | Thale cress | cytosol, endoplasmic reticulum, plasma membrane | 29.78 | 41.09 |
| CDY68098 | Canola | endoplasmic reticulum, mitochondrion, plasma membrane | 31.46 | 40.58 |
| CDX94417 | Canola | endoplasmic reticulum, mitochondrion, plasma membrane | 31.46 | 40.58 |
| Bra013917.1-P | Field mustard | endoplasmic reticulum, mitochondrion, plasma membrane | 31.46 | 40.58 |
| KRH02920 | Soybean | endoplasmic reticulum, nucleus, plasma membrane | 36.52 | 39.63 |
| CDY34757 | Canola | endoplasmic reticulum, nucleus, plasma membrane | 33.15 | 39.33 |
| AT2G24762.1 | Thale cress | golgi, plasma membrane, plastid | 34.27 | 39.1 |
| Bra007834.1-P | Field mustard | golgi, mitochondrion, plasma membrane | 32.58 | 38.67 |
| CDX76795 | Canola | golgi, mitochondrion, plastid | 31.46 | 37.33 |
| Zm00001d053729_P001 | Maize | plastid | 29.78 | 36.55 |
| Solyc08g006520.1.1 | Tomato | cytosol, endoplasmic reticulum, plasma membrane, plastid | 36.52 | 36.52 |
| PGSC0003DMT400075273 | Potato | cytosol, endoplasmic reticulum, plasma membrane, plastid | 30.9 | 36.42 |
| PGSC0003DMT400067619 | Potato | mitochondrion | 37.08 | 36.26 |
| Zm00001d046927_P001 | Maize | endoplasmic reticulum, mitochondrion, plasma membrane | 37.08 | 35.87 |
| Solyc12g096480.1.1 | Tomato | plastid | 30.34 | 35.53 |
| AT4G31730.1 | Thale cress | endoplasmic reticulum, plasma membrane, plastid | 31.46 | 35.44 |
| Solyc12g096490.1.1 | Tomato | endoplasmic reticulum, plasma membrane, plastid | 32.02 | 34.76 |
| Bra023987.1-P | Field mustard | endoplasmic reticulum, mitochondrion, plasma membrane, plastid | 32.02 | 34.76 |
| CDX72326 | Canola | endoplasmic reticulum, mitochondrion, plasma membrane | 32.02 | 34.76 |
| Bra011294.1-P | Field mustard | mitochondrion | 31.46 | 33.73 |
| CDX68780 | Canola | mitochondrion | 31.46 | 33.73 |
| Zm00001d024198_P001 | Maize | plastid | 32.58 | 33.14 |
| PGSC0003DMT400075274 | Potato | plastid | 29.21 | 33.12 |
| Zm00001d015470_P001 | Maize | plastid | 34.83 | 31.79 |
| KRH18976 | Soybean | plasma membrane | 38.2 | 29.06 |
| Bra020423.1-P | Field mustard | cytosol | 17.42 | 28.44 |
Protein Annotations
| EMBL:EU969887 | EnsemblPlants:Zm00001d032115_P001 | EnsemblPlants:Zm00001d032115_T001 | EnsemblPlantsGene:Zm00001d032115 | EntrezGene:100284850 | GO:GO:0005575 |
| GO:GO:0016020 | GO:GO:0016021 | PANTHER:PTHR33228 | PANTHER:PTHR33228:SF5 | ProteinID:ONM04420.1 | SEG:seg |
| TMHMM:TMhelix | UniParc:UPI000182D2DE | UniProt:B6TY22 | MapMan:35.2 | : | : |
Description
GDU1
Coordinates
chr1:-:213530295..213530831
Molecular Weight (calculated)
18268.6 Da
IEP (calculated)
5.722
GRAVY (calculated)
-0.160
Length
178 amino acids
Sequence
(BLAST)
(BLAST)
001: MRPGGAGFNA TAAAKVAAAP AVAAGSAAAH SAWHSPVPYL FGGLAAMLGL IAFALLILAC SYWKLSGYLE GGAGEGGSGA GAGGDKPAAS DLPPPVWEEK
101: ILVIMAGDVK PTYLATPMSS RASSFGDRSS QGGEQEEKEK SKVQQQVAMA SVVKDAELNG ERSESRRREG EERHIPEV
101: ILVIMAGDVK PTYLATPMSS RASSFGDRSS QGGEQEEKEK SKVQQQVAMA SVVKDAELNG ERSESRRREG EERHIPEV
001: MEGRQYYPPR ENVEGNRTTM GGGPHSPWHS PVPYLFGGLA AMLGLIAFAL LILACSYWRL SGYLDGEENQ SRERDLEVGD VKPDKTAVKP VALPEKFLVI
101: MAGNVKPTYL ATPSVKTCTC DDDDDEDDDV EGSDQVVPRS SESNGETH
101: MAGNVKPTYL ATPSVKTCTC DDDDDEDDDV EGSDQVVPRS SESNGETH
Arabidopsis Description
GDU3Protein GLUTAMINE DUMPER 3 [Source:UniProtKB/Swiss-Prot;Acc:Q9FHH5]
SUBAcon: [endoplasmic reticulum,cytosol,plasma membrane]
SUBAcon: [endoplasmic reticulum,cytosol,plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.