Factsheet for HORVU4Hr1G013760.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, plasma membrane, golgi, plastid

Predictor Summary:

plastid 1
mitochondrion 2
golgi 1
plasma membrane 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	golgi, mitochondrion, plasma membrane, plastid
Any Predictor:	golgi, mitochondrion, plastid
ChloroP:	plastid
iPSORT:	mitochondrion
MultiLoc:	golgi
TargetP:	mitochondrion
YLoc:	plasma membrane

PPI

Inferred distinct locusB in Crop

locusB	locations
HORVU0Hr1G008700.4
HORVU7Hr1G109550.2

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT2G24762.1	HORVU0Hr1G008700.4	AT3G09770.1	22291198
AT2G24762.1	HORVU7Hr1G109550.2	AT3G09770.1	22291198
AT2G24762.1	HORVU0Hr1G008700.4	AT5G03200.1	22291198
AT2G24762.1	HORVU7Hr1G109550.2	AT5G03200.1	22291198
AT4G25760.1	HORVU0Hr1G008700.4	AT3G09770.1	22291198
AT4G25760.1	HORVU7Hr1G109550.2	AT3G09770.1	22291198
AT4G25760.1	HORVU0Hr1G008700.4	AT3G53410.1	22291198
AT4G25760.1	HORVU7Hr1G109550.2	AT3G53410.1	22291198
AT4G25760.1	HORVU0Hr1G008700.4	AT5G03200.1	22291198
AT4G25760.1	HORVU7Hr1G109550.2	AT5G03200.1	22291198
AT4G31730.1	HORVU0Hr1G008700.4	AT3G09770.1	22291198
AT4G31730.1	HORVU7Hr1G109550.2	AT3G09770.1	22291198
AT4G31730.1	HORVU0Hr1G008700.4	AT3G09770.1	24036454
AT4G31730.1	HORVU7Hr1G109550.2	AT3G09770.1	24036454
AT4G31730.1	HORVU0Hr1G008700.4	AT5G03200.1	22291198
AT4G31730.1	HORVU7Hr1G109550.2	AT5G03200.1	22291198
AT5G57685.1	HORVU0Hr1G008700.4	AT3G09770.1	22291198
AT5G57685.1	HORVU7Hr1G109550.2	AT3G09770.1	22291198
AT5G57685.1	HORVU0Hr1G008700.4	AT3G53410.1	22291198
AT5G57685.1	HORVU7Hr1G109550.2	AT3G53410.1	22291198
AT5G57685.1	HORVU0Hr1G008700.4	AT5G03200.1	22291198
AT5G57685.1	HORVU7Hr1G109550.2	AT5G03200.1	22291198

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS4B01G081100.1	Wheat	endoplasmic reticulum, extracellular, plasma membrane	62.23	72.67
Os08t0446800-01	Rice	endoplasmic reticulum, extracellular, plasma membrane	53.72	56.11
TraesCS4A01G234200.1	Wheat	endoplasmic reticulum, extracellular, plasma membrane	49.47	54.71
TraesCS4D01G079800.1	Wheat	endoplasmic reticulum, extracellular, plasma membrane	46.28	53.37
Zm00001d032115_P001	Maize	extracellular, golgi, plasma membrane	50.0	52.81
EES13936	Sorghum	endoplasmic reticulum, extracellular, plasma membrane	49.47	52.54
Bra002705.1-P	Field mustard	endoplasmic reticulum, mitochondrion, plasma membrane	35.11	44.9
Bra002707.1-P	Field mustard	endoplasmic reticulum, mitochondrion, plasma membrane	35.11	44.9
Zm00001d050079_P001	Maize	extracellular, golgi, plasma membrane	45.21	44.74
AT5G57685.1	Thale cress	cytosol, endoplasmic reticulum, plasma membrane	35.11	44.59
Bra019142.1-P	Field mustard	endoplasmic reticulum, mitochondrion, plasma membrane	32.45	44.2
CDY72356	Canola	endoplasmic reticulum, mitochondrion, plasma membrane	32.45	44.2
AT4G25760.1	Thale cress	cytosol, endoplasmic reticulum, plasma membrane	30.32	44.19
GSMUA_Achr11P...	Banana	extracellular, golgi, mitochondrion, plastid	35.64	44.08
Bra006808.1-P	Field mustard	plasma membrane	34.04	43.84
CDX92732	Canola	plasma membrane	30.85	42.96
Bra013917.1-P	Field mustard	endoplasmic reticulum, mitochondrion, plasma membrane	30.85	42.03
CDY68098	Canola	endoplasmic reticulum, mitochondrion, plasma membrane	30.85	42.03
CDX94417	Canola	endoplasmic reticulum, mitochondrion, plasma membrane	30.32	41.3
Bra020422.1-P	Field mustard	endoplasmic reticulum, mitochondrion, plasma membrane	32.45	41.22
AT2G24762.1	Thale cress	golgi, plasma membrane, plastid	34.04	41.03
KRH02920	Soybean	endoplasmic reticulum, nucleus, plasma membrane	34.04	39.02
CDY13451	Canola	plasma membrane	26.6	38.46
CDY34757	Canola	endoplasmic reticulum, nucleus, plasma membrane	30.32	38.0
AT4G31730.1	Thale cress	endoplasmic reticulum, plasma membrane, plastid	31.91	37.97
CDX76795	Canola	golgi, mitochondrion, plastid	29.26	36.67
CDX72326	Canola	endoplasmic reticulum, mitochondrion, plasma membrane	31.91	36.59
Bra007834.1-P	Field mustard	golgi, mitochondrion, plasma membrane	28.72	36.0
Bra023987.1-P	Field mustard	endoplasmic reticulum, mitochondrion, plasma membrane, plastid	31.38	35.98
VIT_04s0008g07370.t01	Wine grape	plastid	32.45	35.67
PGSC0003DMT400075273	Potato	cytosol, endoplasmic reticulum, plasma membrane, plastid	28.19	35.1
HORVU7Hr1G111310.2	Barley	endoplasmic reticulum, mitochondrion, plasma membrane	33.51	34.81
Bra011294.1-P	Field mustard	mitochondrion	30.32	34.34
Solyc12g096480.1.1	Tomato	plastid	27.13	33.55
Solyc12g096490.1.1	Tomato	endoplasmic reticulum, plasma membrane, plastid	28.72	32.93
Solyc08g006520.1.1	Tomato	cytosol, endoplasmic reticulum, plasma membrane, plastid	30.85	32.58
PGSC0003DMT400067619	Potato	mitochondrion	30.85	31.87
HORVU6Hr1G030050.2	Barley	peroxisome, vacuole	30.32	30.81
CDX68780	Canola	mitochondrion	27.13	30.72
Bra020423.1-P	Field mustard	cytosol	17.02	29.36
PGSC0003DMT400075274	Potato	plastid	24.47	29.3
HORVU7Hr1G111320.1	Barley	endoplasmic reticulum, peroxisome, plastid	32.98	29.11
HORVU1Hr1G003070.1	Barley	endoplasmic reticulum, peroxisome, plastid	32.98	29.11
HORVU7Hr1G111350.1	Barley	endoplasmic reticulum, nucleus, plasma membrane	32.98	28.57
HORVU1Hr1G003080.1	Barley	endoplasmic reticulum, nucleus, plasma membrane	32.98	28.57
HORVU1Hr1G003060.2	Barley	endoplasmic reticulum, mitochondrion, plasma membrane	32.45	28.5
KRH18976	Soybean	plasma membrane	34.57	27.78
HORVU0Hr1G022370.1	Barley	mitochondrion	35.11	26.72

Protein Annotations

EnsemblPlants:HORVU4Hr1G013760.1	EnsemblPlantsGene:HORVU4Hr1G013760	GO:GO:0005575	GO:GO:0016020	GO:GO:0016021	PANTHER:PTHR33228
PANTHER:PTHR33228:SF5	SEG:seg	TMHMM:TMhelix	UniParc:UPI000B471054	UniProt:A0A287NAP8	MapMan:35.2

Description

No Description!

Coordinates

chrchr4H:+:49436714..49437766

Molecular Weight (calculated)

19759.4 Da

IEP (calculated)

5.725

GRAVY (calculated)

-0.207

Length

188 amino acids

Sequence
(BLAST)

001: YQVLLTTGQE QQKTNSHILP LLRSNISTRS VETMRPGAGF NATAAATKAV AAPLAAGAAH SAWHSPVPYL FGGLAAMLGL IAFALLILAC SYWKLSGYLE
101: GSAGRGEDEG SATDGAKPVA SDLPPPAWEE KVLVVMAGDV KPTYLATPMS SRDRGSKGEE EEKKVSTVAM ASIKDADNGE QSEPERTR

Best Arabidopsis Sequence Match ( AT5G57685.1 )
(BLAST)

001: MEGRQYYPPR ENVEGNRTTM GGGPHSPWHS PVPYLFGGLA AMLGLIAFAL LILACSYWRL SGYLDGEENQ SRERDLEVGD VKPDKTAVKP VALPEKFLVI
101: MAGNVKPTYL ATPSVKTCTC DDDDDEDDDV EGSDQVVPRS SESNGETH

Arabidopsis Description

GDU3Protein GLUTAMINE DUMPER 3 [Source:UniProtKB/Swiss-Prot;Acc:Q9FHH5]
SUBAcon: [endoplasmic reticulum,cytosol,plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.