Factsheet for HORVU7Hr1G111350.1

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum, nucleus, plasma membrane

Predictor Summary:

nucleus 3
cytosol 1
plastid 1
endoplasmic reticulum 2
extracellular 1
vacuole 1
plasma membrane 2
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum, nucleus, plasma membrane
Any Predictor:	cytosol, nucleus, plastid, secretory
BaCelLo:	nucleus
EpiLoc:	cytosol
iPSORT:	plastid
MultiLoc:	endoplasmic reticulum
Plant-mPloc:	nucleus
PProwler:	secretory
WoLF PSORT:	nucleus
YLoc:	plasma membrane

PPI

Inferred distinct locusB in Crop

locusB	locations
HORVU0Hr1G008700.4
HORVU7Hr1G109550.2

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT2G24762.1	HORVU0Hr1G008700.4	AT3G09770.1	22291198
AT2G24762.1	HORVU7Hr1G109550.2	AT3G09770.1	22291198
AT2G24762.1	HORVU0Hr1G008700.4	AT5G03200.1	22291198
AT2G24762.1	HORVU7Hr1G109550.2	AT5G03200.1	22291198
AT4G25760.1	HORVU0Hr1G008700.4	AT3G09770.1	22291198
AT4G25760.1	HORVU7Hr1G109550.2	AT3G09770.1	22291198
AT4G25760.1	HORVU0Hr1G008700.4	AT3G53410.1	22291198
AT4G25760.1	HORVU7Hr1G109550.2	AT3G53410.1	22291198
AT4G25760.1	HORVU0Hr1G008700.4	AT5G03200.1	22291198
AT4G25760.1	HORVU7Hr1G109550.2	AT5G03200.1	22291198
AT4G31730.1	HORVU0Hr1G008700.4	AT3G09770.1	22291198
AT4G31730.1	HORVU7Hr1G109550.2	AT3G09770.1	22291198
AT4G31730.1	HORVU0Hr1G008700.4	AT3G09770.1	24036454
AT4G31730.1	HORVU7Hr1G109550.2	AT3G09770.1	24036454
AT4G31730.1	HORVU0Hr1G008700.4	AT5G03200.1	22291198
AT4G31730.1	HORVU7Hr1G109550.2	AT5G03200.1	22291198
AT5G57685.1	HORVU0Hr1G008700.4	AT3G09770.1	22291198
AT5G57685.1	HORVU7Hr1G109550.2	AT3G09770.1	22291198
AT5G57685.1	HORVU0Hr1G008700.4	AT3G53410.1	22291198
AT5G57685.1	HORVU7Hr1G109550.2	AT3G53410.1	22291198
AT5G57685.1	HORVU0Hr1G008700.4	AT5G03200.1	22291198
AT5G57685.1	HORVU7Hr1G109550.2	AT5G03200.1	22291198

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU1Hr1G003080.1	Barley	endoplasmic reticulum, nucleus, plasma membrane	100.0	100.0
HORVU1Hr1G003060.2	Barley	endoplasmic reticulum, mitochondrion, plasma membrane	64.98	65.89
TraesCS7A01G497800.1	Wheat	endoplasmic reticulum, nucleus, plasma membrane	60.83	64.08
TraesCS7D01G485200.1	Wheat	vacuole	54.38	55.4
Zm00001d036703_P001	Maize	endoplasmic reticulum, extracellular, plasma membrane	36.41	54.48
Os06t0654400-00	Rice	endoplasmic reticulum, nucleus, plasma membrane	41.94	49.46
HORVU7Hr1G111320.1	Barley	endoplasmic reticulum, peroxisome, plastid	47.93	48.83
HORVU1Hr1G003070.1	Barley	endoplasmic reticulum, peroxisome, plastid	47.93	48.83
HORVU7Hr1G111310.2	Barley	endoplasmic reticulum, mitochondrion, plasma membrane	40.09	48.07
HORVU0Hr1G022370.1	Barley	mitochondrion	54.38	47.77
TraesCS7B01G404700.1	Wheat	cytosol, endoplasmic reticulum, plastid	57.6	47.53
GSMUA_Achr7P16360_001	Banana	endoplasmic reticulum, extracellular, plasma membrane	21.66	46.53
EER90144	Sorghum	endoplasmic reticulum, plasma membrane, plastid	41.47	46.39
Zm00001d046927_P001	Maize	endoplasmic reticulum, mitochondrion, plasma membrane	35.94	42.39
EER88756	Sorghum	endoplasmic reticulum, extracellular, plasma membrane	37.33	41.97
Bra006808.1-P	Field mustard	plasma membrane	27.19	40.41
HORVU6Hr1G030050.2	Barley	peroxisome, vacuole	33.64	39.46
CDX68780	Canola	mitochondrion	29.03	37.95
CDY72356	Canola	endoplasmic reticulum, mitochondrion, plasma membrane	23.96	37.68
Bra019142.1-P	Field mustard	endoplasmic reticulum, mitochondrion, plasma membrane	23.96	37.68
AT4G25760.1	Thale cress	cytosol, endoplasmic reticulum, plasma membrane	22.12	37.21
CDY13451	Canola	plasma membrane	22.12	36.92
Bra002707.1-P	Field mustard	endoplasmic reticulum, mitochondrion, plasma membrane	24.88	36.73
Bra002705.1-P	Field mustard	endoplasmic reticulum, mitochondrion, plasma membrane	24.88	36.73
CDX92732	Canola	plasma membrane	22.58	36.3
PGSC0003DMT400067619	Potato	mitochondrion	30.41	36.26
KRH02920	Soybean	endoplasmic reticulum, nucleus, plasma membrane	27.19	35.98
Bra020422.1-P	Field mustard	endoplasmic reticulum, mitochondrion, plasma membrane	24.42	35.81
AT5G57685.1	Thale cress	cytosol, endoplasmic reticulum, plasma membrane	24.42	35.81
CDY34757	Canola	endoplasmic reticulum, nucleus, plasma membrane	24.42	35.33
Bra007834.1-P	Field mustard	golgi, mitochondrion, plasma membrane	24.42	35.33
CDX76795	Canola	golgi, mitochondrion, plastid	24.42	35.33
PGSC0003DMT400075273	Potato	cytosol, endoplasmic reticulum, plasma membrane, plastid	24.42	35.1
Bra013917.1-P	Field mustard	endoplasmic reticulum, mitochondrion, plasma membrane	22.12	34.78
CDY68098	Canola	endoplasmic reticulum, mitochondrion, plasma membrane	22.12	34.78
CDX94417	Canola	endoplasmic reticulum, mitochondrion, plasma membrane	22.12	34.78
Solyc12g096490.1.1	Tomato	endoplasmic reticulum, plasma membrane, plastid	25.81	34.15
AT2G24762.1	Thale cress	golgi, plasma membrane, plastid	24.42	33.97
VIT_04s0008g07370.t01	Wine grape	plastid	26.73	33.92
Solyc12g096480.1.1	Tomato	plastid	23.5	33.55
AT4G31730.1	Thale cress	endoplasmic reticulum, plasma membrane, plastid	24.42	33.54
HORVU4Hr1G013760.1	Barley	golgi, mitochondrion, plasma membrane, plastid	28.57	32.98
CDX72326	Canola	endoplasmic reticulum, mitochondrion, plasma membrane	24.42	32.32
Solyc08g006520.1.1	Tomato	cytosol, endoplasmic reticulum, plasma membrane, plastid	26.27	32.02
Bra023987.1-P	Field mustard	endoplasmic reticulum, mitochondrion, plasma membrane, plastid	23.96	31.71
Bra011294.1-P	Field mustard	mitochondrion	23.96	31.33
PGSC0003DMT400075274	Potato	plastid	22.12	30.57
KRH18976	Soybean	plasma membrane	27.19	25.21
Bra020423.1-P	Field mustard	cytosol	11.06	22.02

Protein Annotations

EnsemblPlants:HORVU7Hr1G111350.1	EnsemblPlantsGene:HORVU7Hr1G111350	GO:GO:0005575	GO:GO:0016020	GO:GO:0016021	PANTHER:PTHR33228
PANTHER:PTHR33228:SF17	SEG:seg	TMHMM:TMhelix	UniParc:UPI0002952070	UniProt:M0XW47	MapMan:35.2

Description

No Description!

Coordinates

chrchr7H:+:633392183..633392836

Molecular Weight (calculated)

22434.7 Da

IEP (calculated)

5.793

GRAVY (calculated)

-0.429

Length

217 amino acids

Sequence
(BLAST)

001: MRPGAEFLAA SHLAGAPTAT PAHGLLNGTA APHSAWQSPV PYLFGGLAAM LGLIAFALLI LACSYWKLSG FLEGGSDGQA AGDADGEKGS ASGASKPAMD
101: ILDHVVVIMA GDERPTFLAK PVTSRAAEAE LAATAAPDAS TRAGEVQEKK AGEQGREASS NPGADAASRS RDHHDDAASQ SRDHDEDAAS RMDNHHHHHH
201: HHDLESSGTT ALQESRQ

Best Arabidopsis Sequence Match ( AT5G57685.1 )
(BLAST)

001: MEGRQYYPPR ENVEGNRTTM GGGPHSPWHS PVPYLFGGLA AMLGLIAFAL LILACSYWRL SGYLDGEENQ SRERDLEVGD VKPDKTAVKP VALPEKFLVI
101: MAGNVKPTYL ATPSVKTCTC DDDDDEDDDV EGSDQVVPRS SESNGETH

Arabidopsis Description

GDU3Protein GLUTAMINE DUMPER 3 [Source:UniProtKB/Swiss-Prot;Acc:Q9FHH5]
SUBAcon: [endoplasmic reticulum,cytosol,plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.