Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum
Predictor Summary:
Predictor Summary:
- mitochondrion 1
- endoplasmic reticulum 3
- extracellular 1
- vacuole 1
- plasma membrane 2
- golgi 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS7D01G485400.1 | Wheat | golgi, mitochondrion, plasma membrane | 75.66 | 70.1 |
| TraesCS7B01G405000.1 | Wheat | endoplasmic reticulum, mitochondrion, plasma membrane | 70.9 | 66.01 |
| HORVU7Hr1G111310.2 | Barley | endoplasmic reticulum, mitochondrion, plasma membrane | 62.96 | 65.75 |
| TraesCS7A01G498000.1 | Wheat | endoplasmic reticulum, mitochondrion, plasma membrane | 56.61 | 53.77 |
| HORVU0Hr1G022370.1 | Barley | mitochondrion | 66.14 | 50.61 |
| TraesCS7A01G497900.1 | Wheat | endoplasmic reticulum | 54.5 | 47.69 |
| TraesCS7A01G497800.1 | Wheat | endoplasmic reticulum, nucleus, plasma membrane | 51.32 | 47.09 |
| GSMUA_Achr7P16360_001 | Banana | endoplasmic reticulum, extracellular, plasma membrane | 23.81 | 44.55 |
| TraesCS6A01G150800.1 | Wheat | endoplasmic reticulum, extracellular, plasma membrane | 39.15 | 44.31 |
| TraesCS4A01G234200.1 | Wheat | endoplasmic reticulum, extracellular, plasma membrane | 37.57 | 41.76 |
| AT4G25760.1 | Thale cress | cytosol, endoplasmic reticulum, plasma membrane | 28.04 | 41.09 |
| Bra006808.1-P | Field mustard | plasma membrane | 31.22 | 40.41 |
| VIT_04s0008g07370.t01 | Wine grape | plastid | 36.51 | 40.35 |
| Bra002705.1-P | Field mustard | endoplasmic reticulum, mitochondrion, plasma membrane | 31.22 | 40.14 |
| Bra002707.1-P | Field mustard | endoplasmic reticulum, mitochondrion, plasma membrane | 31.22 | 40.14 |
| CDY13451 | Canola | plasma membrane | 27.51 | 40.0 |
| Bra020422.1-P | Field mustard | endoplasmic reticulum, mitochondrion, plasma membrane | 30.69 | 39.19 |
| AT4G31730.1 | Thale cress | endoplasmic reticulum, plasma membrane, plastid | 32.28 | 38.61 |
| CDX92732 | Canola | plasma membrane | 27.51 | 38.52 |
| AT5G57685.1 | Thale cress | cytosol, endoplasmic reticulum, plasma membrane | 30.16 | 38.51 |
| AT2G24762.1 | Thale cress | golgi, plasma membrane, plastid | 31.75 | 38.46 |
| CDY72356 | Canola | endoplasmic reticulum, mitochondrion, plasma membrane | 28.04 | 38.41 |
| CDY68098 | Canola | endoplasmic reticulum, mitochondrion, plasma membrane | 28.04 | 38.41 |
| Bra013917.1-P | Field mustard | endoplasmic reticulum, mitochondrion, plasma membrane | 28.04 | 38.41 |
| Bra019142.1-P | Field mustard | endoplasmic reticulum, mitochondrion, plasma membrane | 28.04 | 38.41 |
| CDY34757 | Canola | endoplasmic reticulum, nucleus, plasma membrane | 30.16 | 38.0 |
| CDX94417 | Canola | endoplasmic reticulum, mitochondrion, plasma membrane | 27.51 | 37.68 |
| Solyc08g006520.1.1 | Tomato | cytosol, endoplasmic reticulum, plasma membrane, plastid | 35.45 | 37.64 |
| PGSC0003DMT400067619 | Potato | mitochondrion | 35.98 | 37.36 |
| Zm00001d053729_P001 | Maize | plastid | 28.57 | 37.24 |
| KRH02920 | Soybean | endoplasmic reticulum, nucleus, plasma membrane | 31.75 | 36.59 |
| CDX68780 | Canola | mitochondrion | 31.75 | 36.14 |
| Bra007834.1-P | Field mustard | golgi, mitochondrion, plasma membrane | 28.57 | 36.0 |
| EES06373 | Sorghum | endoplasmic reticulum, nucleus, plasma membrane, plastid | 38.1 | 35.64 |
| CDX76795 | Canola | golgi, mitochondrion, plastid | 28.04 | 35.33 |
| PGSC0003DMT400075273 | Potato | cytosol, endoplasmic reticulum, plasma membrane, plastid | 28.04 | 35.1 |
| Solyc12g096480.1.1 | Tomato | plastid | 26.45 | 32.89 |
| CDX72326 | Canola | endoplasmic reticulum, mitochondrion, plasma membrane | 28.04 | 32.32 |
| Zm00001d015470_P001 | Maize | plastid | 32.8 | 31.79 |
| Solyc12g096490.1.1 | Tomato | endoplasmic reticulum, plasma membrane, plastid | 27.51 | 31.71 |
| Bra023987.1-P | Field mustard | endoplasmic reticulum, mitochondrion, plasma membrane, plastid | 27.51 | 31.71 |
| Bra011294.1-P | Field mustard | mitochondrion | 27.51 | 31.33 |
| PGSC0003DMT400075274 | Potato | plastid | 24.34 | 29.3 |
| Bra020423.1-P | Field mustard | cytosol | 14.81 | 25.69 |
| KRH18976 | Soybean | plasma membrane | 31.22 | 25.21 |
Protein Annotations
| EnsemblPlants:TraesCS7A01G498100.1 | EnsemblPlantsGene:TraesCS7A01G498100 | PANTHER:PTHR33228 | PANTHER:PTHR33228:SF17 | SEG:seg | TMHMM:TMhelix |
| MapMan:35.2 | : | : | : | : | : |
Description
No Description!
Coordinates
chr7A:-:688665335..688666066
Molecular Weight (calculated)
19366.5 Da
IEP (calculated)
4.835
GRAVY (calculated)
-0.223
Length
189 amino acids
Sequence
(BLAST)
(BLAST)
001: MRPGAEFVAM SHRAGAPMVA PAHGLINGTA PHSPWQSPVP YLFGGLAAML GLIALALLIL ACSYWKLSGY LDGDRDGQES GGDGEKASAS GASKPALDFQ
101: EHVVVIMAGD DRPTFLAKPA TSRAAEVELA AAAAASASAV DEKEKKMDEQ GCEVSSQLGG DPADAASGSS GHHHDHESSS TTGRQESLQ
101: EHVVVIMAGD DRPTFLAKPA TSRAAEVELA AAAAASASAV DEKEKKMDEQ GCEVSSQLGG DPADAASGSS GHHHDHESSS TTGRQESLQ
001: MRPLSVQSKF EDVATSTSVN HHGVTPQSPW HSPVPYLFGG LAAMLGLIAF ALLILACSYW RLSSSGEEDG QNVDEEKESR SGDKAANGAY EEKFLVIMAG
101: EDLPRYLATP AMKKCTCGGH EGKMVISQEE SVAKEEEKMR EGEEEKVKDT GETTTTSH
101: EDLPRYLATP AMKKCTCGGH EGKMVISQEE SVAKEEEKMR EGEEEKVKDT GETTTTSH
Arabidopsis Description
GDU1Protein GLUTAMINE DUMPER 1 [Source:UniProtKB/Swiss-Prot;Acc:O81775]
SUBAcon: [endoplasmic reticulum,plastid,plasma membrane]
SUBAcon: [endoplasmic reticulum,plastid,plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.