Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 5
- nucleus 2
- vacuole 2
- plasma membrane 2
- extracellular 1
- endoplasmic reticulum 1
- golgi 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| EER92535 |
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d024198_P001 | Maize | plastid | 51.38 | 53.14 |
| GSMUA_Achr1P23400_001 | Banana | cytosol, mitochondrion, plasma membrane | 34.25 | 39.49 |
| Os08t0249200-00 | Rice | plastid | 42.54 | 39.09 |
| AT4G25760.1 | Thale cress | cytosol, endoplasmic reticulum, plasma membrane | 26.52 | 37.21 |
| CDY13451 | Canola | plasma membrane | 26.52 | 36.92 |
| GSMUA_Achr7P05080_001 | Banana | endoplasmic reticulum, plasma membrane, plastid | 30.39 | 36.91 |
| EER90144 | Sorghum | endoplasmic reticulum, plasma membrane, plastid | 38.67 | 36.08 |
| CDY34757 | Canola | endoplasmic reticulum, nucleus, plasma membrane | 29.83 | 36.0 |
| CDX76795 | Canola | golgi, mitochondrion, plastid | 29.28 | 35.33 |
| Bra007834.1-P | Field mustard | golgi, mitochondrion, plasma membrane | 28.73 | 34.67 |
| AT2G24762.1 | Thale cress | golgi, plasma membrane, plastid | 29.83 | 34.62 |
| Bra002707.1-P | Field mustard | endoplasmic reticulum, mitochondrion, plasma membrane | 27.62 | 34.01 |
| Bra002705.1-P | Field mustard | endoplasmic reticulum, mitochondrion, plasma membrane | 27.62 | 34.01 |
| EER88756 | Sorghum | endoplasmic reticulum, extracellular, plasma membrane | 35.91 | 33.68 |
| Bra006808.1-P | Field mustard | plasma membrane | 27.07 | 33.56 |
| EES13936 | Sorghum | endoplasmic reticulum, extracellular, plasma membrane | 32.6 | 33.33 |
| KRH02920 | Soybean | endoplasmic reticulum, nucleus, plasma membrane | 29.83 | 32.93 |
| Bra013917.1-P | Field mustard | endoplasmic reticulum, mitochondrion, plasma membrane | 24.86 | 32.61 |
| CDY68098 | Canola | endoplasmic reticulum, mitochondrion, plasma membrane | 24.86 | 32.61 |
| CDX92732 | Canola | plasma membrane | 24.31 | 32.59 |
| PGSC0003DMT400067619 | Potato | mitochondrion | 32.6 | 32.42 |
| CDX72326 | Canola | endoplasmic reticulum, mitochondrion, plasma membrane | 29.28 | 32.32 |
| CDX94417 | Canola | endoplasmic reticulum, mitochondrion, plasma membrane | 24.31 | 31.88 |
| Bra020422.1-P | Field mustard | endoplasmic reticulum, mitochondrion, plasma membrane | 25.97 | 31.76 |
| AT5G57685.1 | Thale cress | cytosol, endoplasmic reticulum, plasma membrane | 25.97 | 31.76 |
| Bra023987.1-P | Field mustard | endoplasmic reticulum, mitochondrion, plasma membrane, plastid | 28.73 | 31.71 |
| CDY72356 | Canola | endoplasmic reticulum, mitochondrion, plasma membrane | 23.76 | 31.16 |
| Bra019142.1-P | Field mustard | endoplasmic reticulum, mitochondrion, plasma membrane | 23.76 | 31.16 |
| Solyc12g096480.1.1 | Tomato | plastid | 25.97 | 30.92 |
| Solyc08g006520.1.1 | Tomato | cytosol, endoplasmic reticulum, plasma membrane, plastid | 30.39 | 30.9 |
| CDX68780 | Canola | mitochondrion | 28.18 | 30.72 |
| Bra011294.1-P | Field mustard | mitochondrion | 28.18 | 30.72 |
| AT4G31730.1 | Thale cress | endoplasmic reticulum, plasma membrane, plastid | 26.52 | 30.38 |
| VIT_04s0008g07370.t01 | Wine grape | plastid | 28.18 | 29.82 |
| PGSC0003DMT400075273 | Potato | cytosol, endoplasmic reticulum, plasma membrane, plastid | 23.76 | 28.48 |
| Solyc12g096490.1.1 | Tomato | endoplasmic reticulum, plasma membrane, plastid | 25.41 | 28.05 |
| PGSC0003DMT400075274 | Potato | plastid | 23.76 | 27.39 |
| EES06373 | Sorghum | endoplasmic reticulum, nucleus, plasma membrane, plastid | 29.28 | 26.24 |
| KRH18976 | Soybean | plasma membrane | 31.49 | 24.36 |
| Bra020423.1-P | Field mustard | cytosol | 13.26 | 22.02 |
Protein Annotations
| EnsemblPlants:EES13610 | EnsemblPlantsGene:SORBI_3007G091800 | EntrezGene:8067935 | GO:GO:0005575 | GO:GO:0016020 | GO:GO:0016021 |
| PANTHER:PTHR33228 | PANTHER:PTHR33228:SF8 | ProteinID:EES13610 | ProteinID:EES13610.1 | RefSeq:XP_002444115.1 | SEG:seg |
| TMHMM:TMhelix | UniParc:UPI0001A87C93 | UniProt:C5YJL1 | MapMan:35.2 | : | : |
Description
hypothetical protein
Coordinates
chr7:+:15370002..15370883
Molecular Weight (calculated)
18078.2 Da
IEP (calculated)
4.712
GRAVY (calculated)
0.003
Length
181 amino acids
Sequence
(BLAST)
(BLAST)
001: MRPATSVSRP TSTSTTSPAA IPAAAAAAAA ALPASPWHSP VPYLFGGLAA MLGLITLALL ILACSYWKLN NYLGTGDATA SASSGPGRPG ATDGDGSKSP
101: AASPATFADL VAVVMAGEKM PTFLAAPIVR RAHSNGATAI VTGEGSSPET EEEQESRGKA GEGESGVVAD AERERQLADQ V
101: AASPATFADL VAVVMAGEKM PTFLAAPIVR RAHSNGATAI VTGEGSSPET EEEQESRGKA GEGESGVVAD AERERQLADQ V
001: MRPLSVQSKF EDVATSTSVN HHGVTPQSPW HSPVPYLFGG LAAMLGLIAF ALLILACSYW RLSSSGEEDG QNVDEEKESR SGDKAANGAY EEKFLVIMAG
101: EDLPRYLATP AMKKCTCGGH EGKMVISQEE SVAKEEEKMR EGEEEKVKDT GETTTTSH
101: EDLPRYLATP AMKKCTCGGH EGKMVISQEE SVAKEEEKMR EGEEEKVKDT GETTTTSH
Arabidopsis Description
GDU1Protein GLUTAMINE DUMPER 1 [Source:UniProtKB/Swiss-Prot;Acc:O81775]
SUBAcon: [endoplasmic reticulum,plastid,plasma membrane]
SUBAcon: [endoplasmic reticulum,plastid,plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.