CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

nucleus 2
plastid 3
endoplasmic reticulum 2
plasma membrane 3
extracellular 1
vacuole 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	nucleus, plastid, secretory
BaCelLo:	nucleus
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	endoplasmic reticulum
Plant-mPloc:	nucleus, plasma membrane
PProwler:	secretory
WoLF PSORT:	plastid
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH01448	Soybean	plastid	67.46	69.11
KRH01450	Soybean	endoplasmic reticulum, plasma membrane, plastid	37.3	42.73
KRH45165	Soybean	endoplasmic reticulum, plasma membrane, plastid	38.89	41.88
KRG93760	Soybean	plastid	31.75	37.74
Solyc02g089450.1.1	Tomato	plastid	27.78	35.71
PGSC0003DMT400003749	Potato	plastid	27.78	33.65
KRH02920	Soybean	endoplasmic reticulum, nucleus, plasma membrane	32.54	25.0
KRH61627	Soybean	endoplasmic reticulum, plasma membrane, plastid	32.54	24.85
KRH52294	Soybean	plastid	29.37	22.42
KRH05332	Soybean	plastid	30.95	22.16
KRH15701	Soybean	plastid	30.16	20.88
KRH18976	Soybean	plasma membrane	35.71	19.23

Protein Annotations

EMBL:ACUP02004998	EMBL:BT097084	EnsemblPlants:KRH45164	EnsemblPlantsGene:GLYMA_08G254800	EntrezGene:100797343	GO:GO:0005575
GO:GO:0016020	GO:GO:0016021	PANTHER:PTHR33228	PANTHER:PTHR33228:SF18	ProteinID:KRH45164	ProteinID:KRH45164.1
SEG:seg	TMHMM:TMhelix	UniParc:UPI0001B16643	UniProt:C6THG3	MapMan:35.2	:

Description

hypothetical protein

Coordinates

chr8:-:22525155..22525949

Molecular Weight (calculated)

13365.9 Da

IEP (calculated)

7.180

GRAVY (calculated)

-0.053

Length

126 amino acids

Sequence
(BLAST)

001: MRAIKSVPTS SPVSGSGINI WKSPIPYLFG GLAVMLAIIS MALVILVCSY RKRDSQSSSS SSEVDQEEIK SQAMSKNLET NSEPEVLVIM AGNHNPTYLA
101: KPITSSSSIY CTCGAQTNPS SSSSTE

Best Arabidopsis Sequence Match ( AT4G31730.1 )
(BLAST)

001: MRPLSVQSKF EDVATSTSVN HHGVTPQSPW HSPVPYLFGG LAAMLGLIAF ALLILACSYW RLSSSGEEDG QNVDEEKESR SGDKAANGAY EEKFLVIMAG
101: EDLPRYLATP AMKKCTCGGH EGKMVISQEE SVAKEEEKMR EGEEEKVKDT GETTTTSH

Arabidopsis Description

GDU1Protein GLUTAMINE DUMPER 1 [Source:UniProtKB/Swiss-Prot;Acc:O81775]
SUBAcon: [endoplasmic reticulum,plastid,plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.