Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 4
- endoplasmic reticulum 2
- plasma membrane 3
- extracellular 1
- vacuole 1
- golgi 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400003749 | Potato | plastid | 81.63 | 76.92 |
| Solyc02g089460.1.1 | Tomato | endoplasmic reticulum, extracellular, mitochondrion, plasma membrane, plastid | 36.73 | 35.64 |
| Solyc02g089480.1.1 | Tomato | plasma membrane | 37.76 | 30.58 |
| KRH01448 | Soybean | plastid | 36.73 | 29.27 |
| KRH45164 | Soybean | plastid | 35.71 | 27.78 |
| Solyc12g096480.1.1 | Tomato | plastid | 36.73 | 23.68 |
| Solyc08g006520.1.1 | Tomato | cytosol, endoplasmic reticulum, plasma membrane, plastid | 41.84 | 23.03 |
| Solyc12g096490.1.1 | Tomato | endoplasmic reticulum, plasma membrane, plastid | 36.73 | 21.95 |
| Solyc07g006600.1.1 | Tomato | endoplasmic reticulum, nucleus, plastid | 35.71 | 18.92 |
Protein Annotations
| EnsemblPlants:Solyc02g089450.1.1 | EnsemblPlantsGene:Solyc02g089450.1 | GO:GO:0005575 | GO:GO:0016020 | GO:GO:0016021 | PANTHER:PTHR33228 |
| PANTHER:PTHR33228:SF5 | SEG:seg | TMHMM:TMhelix | UniParc:UPI0002768C49 | UniProt:K4BC96 | MapMan:35.2 |
Description
No Description!
Coordinates
chr2:-:51269877..51270173
Molecular Weight (calculated)
10712.2 Da
IEP (calculated)
9.638
GRAVY (calculated)
0.300
Length
98 amino acids
Sequence
(BLAST)
(BLAST)
1: MSLSNCSSPY SCSVWRWNST VPYLFGGLAF IFLLISVALV ILACAYCRKK SRNSRGENNG GNGTMINEIR MIVTMKPKIV VIMAGDDKPS YLATPSLA
001: MQTMEGRQYN YQDSINASSS MVVPHSPWHS PVPYLFGGLA AMLALICVAL LILACSYWRL SGSAERDLEA GDDAKPDNDT NKTKHTEMPE KFLVIMAGDV
101: RPTYLATPAT RSEQSCTCGD HNEEEGRRG
101: RPTYLATPAT RSEQSCTCGD HNEEEGRRG
Arabidopsis Description
GDU2Protein GLUTAMINE DUMPER 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9SW07]
SUBAcon: [endoplasmic reticulum,cytosol,plasma membrane]
SUBAcon: [endoplasmic reticulum,cytosol,plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.