Subcellular Localization
min:
: max
Winner_takes_all: extracellular, endoplasmic reticulum, mitochondrion, plastid, plasma membrane
Predictor Summary:
Predictor Summary:
- nucleus 1
- plastid 1
- mitochondrion 2
- endoplasmic reticulum 2
- plasma membrane 3
- extracellular 2
- vacuole 1
- golgi 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400003750 | Potato | plastid | 86.14 | 85.29 |
| Solyc02g089450.1.1 | Tomato | plastid | 35.64 | 36.73 |
| Solyc02g089480.1.1 | Tomato | plasma membrane | 33.66 | 28.1 |
| Solyc08g006520.1.1 | Tomato | cytosol, endoplasmic reticulum, plasma membrane, plastid | 35.64 | 20.22 |
| Solyc12g096490.1.1 | Tomato | endoplasmic reticulum, plasma membrane, plastid | 32.67 | 20.12 |
| Solyc12g096480.1.1 | Tomato | plastid | 29.7 | 19.74 |
| Solyc07g006600.1.1 | Tomato | endoplasmic reticulum, nucleus, plastid | 30.69 | 16.76 |
Protein Annotations
| EnsemblPlants:Solyc02g089460.1.1 | EnsemblPlantsGene:Solyc02g089460.1 | GO:GO:0005575 | GO:GO:0016020 | GO:GO:0016021 | PANTHER:PTHR33228 |
| PANTHER:PTHR33228:SF5 | SEG:seg | TMHMM:TMhelix | UniParc:UPI0002768C4A | UniProt:K4BC97 | MapMan:35.2 |
Description
No Description!
Coordinates
chr2:-:51273137..51273442
Molecular Weight (calculated)
10844.1 Da
IEP (calculated)
7.581
GRAVY (calculated)
0.190
Length
101 amino acids
Sequence
(BLAST)
(BLAST)
001: MRDLSDTASS SSFWTWRSPL PYLFGSLGIM LLLIVVSLVI LACSFHKRFS SNSDPEKSAC TPPSSTIVEM SPSIIVIMAG DHKPTHIGVP ASDKPTHSSA
101: P
101: P
001: MRQFPSIRGN INEKMMTTMV ESQTRSPWRT PVPYLFGGLA AMLGLIAFAL LLLACSYWRL SRQTEDEEKQ TESGEKVVAK AFEEKILVIM AGQNNPTFLA
101: TPVAAKICLD CVNMEKKEGQ NGESKVTEEN H
101: TPVAAKICLD CVNMEKKEGQ NGESKVTEEN H
Arabidopsis Description
GDU5Protein GLUTAMINE DUMPER 5 [Source:UniProtKB/Swiss-Prot;Acc:Q3E965]
SUBAcon: [plasma membrane,golgi,plastid]
SUBAcon: [plasma membrane,golgi,plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.