Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- plastid 1
- endoplasmic reticulum 2
- extracellular 1
- vacuole 1
- plasma membrane 1
- golgi 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc07g006600.1.1 | Tomato | endoplasmic reticulum, nucleus, plastid | 69.43 | 72.43 |
| PGSC0003DMT400075273 | Potato | cytosol, endoplasmic reticulum, plasma membrane, plastid | 27.98 | 35.76 |
| PGSC0003DMT400067619 | Potato | mitochondrion | 33.16 | 35.16 |
| KRH61627 | Soybean | endoplasmic reticulum, plasma membrane, plastid | 30.05 | 35.15 |
| PGSC0003DMT400075274 | Potato | plastid | 27.98 | 34.39 |
| PGSC0003DMT400003752 | Potato | plastid | 21.76 | 34.15 |
| PGSC0003DMT400075948 | Potato | plastid | 21.76 | 34.15 |
| KRH52294 | Soybean | plastid | 29.02 | 33.94 |
| PGSC0003DMT400003749 | Potato | plastid | 18.13 | 33.65 |
| PGSC0003DMT400003750 | Potato | plastid | 16.58 | 31.37 |
Protein Annotations
| EnsemblPlants:PGSC0003DMT400070631 | EnsemblPlantsGene:PGSC0003DMG400027457 | EntrezGene:102583168 | GO:GO:0005575 | GO:GO:0016020 | GO:GO:0016021 |
| PANTHER:PTHR33228 | PANTHER:PTHR33228:SF5 | PGSC:PGSC0003DMG400027457 | RefSeq:XP_006343546.1 | SEG:seg | TMHMM:TMhelix |
| UniParc:UPI0002952A85 | UniProt:M1CMG7 | MapMan:35.2 | : | : | : |
Description
GDU1 [Source:PGSC_GENE;Acc:PGSC0003DMG400027457]
Coordinates
chr7:+:2233782..2234739
Molecular Weight (calculated)
20593.5 Da
IEP (calculated)
3.896
GRAVY (calculated)
-0.541
Length
193 amino acids
Sequence
(BLAST)
(BLAST)
001: MTNLEASSSA IAPVGPPRSP WHSPVPYLFG GLAAMLGLIA FALLILACSY WKLSGNFEEN QEGDLEEGNN NNNNNNNNNG EDGKMVEPPI LEEKFLVIMA
101: GQLKPTYIAT PSLSSRASSF GSNSGCTVSS ESSTDKSEAE EKEEEGNDVS GSSLDNHDET PVGERVKEEE GNEVSSSTSG NDFVVNVTQM QIN
101: GQLKPTYIAT PSLSSRASSF GSNSGCTVSS ESSTDKSEAE EKEEEGNDVS GSSLDNHDET PVGERVKEEE GNEVSSSTSG NDFVVNVTQM QIN
001: MEGRQYYPPR ENVEGNRTTM GGGPHSPWHS PVPYLFGGLA AMLGLIAFAL LILACSYWRL SGYLDGEENQ SRERDLEVGD VKPDKTAVKP VALPEKFLVI
101: MAGNVKPTYL ATPSVKTCTC DDDDDEDDDV EGSDQVVPRS SESNGETH
101: MAGNVKPTYL ATPSVKTCTC DDDDDEDDDV EGSDQVVPRS SESNGETH
Arabidopsis Description
GDU3Protein GLUTAMINE DUMPER 3 [Source:UniProtKB/Swiss-Prot;Acc:Q9FHH5]
SUBAcon: [endoplasmic reticulum,cytosol,plasma membrane]
SUBAcon: [endoplasmic reticulum,cytosol,plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.