Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- nucleus 1
- plastid 4
- endoplasmic reticulum 2
- extracellular 1
- vacuole 1
- plasma membrane 2
- golgi 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400003752 | Potato | plastid | 100.0 | 100.0 |
| Solyc02g089480.1.1 | Tomato | plasma membrane | 72.36 | 73.55 |
| VIT_14s0083g00670.t01 | Wine grape | plastid | 34.96 | 43.0 |
| KRG93760 | Soybean | plastid | 33.33 | 38.68 |
| PGSC0003DMT400003749 | Potato | plastid | 31.71 | 37.5 |
| KRH01450 | Soybean | endoplasmic reticulum, plasma membrane, plastid | 30.89 | 34.55 |
| PGSC0003DMT400003750 | Potato | plastid | 26.83 | 32.35 |
| KRH45165 | Soybean | endoplasmic reticulum, plasma membrane, plastid | 30.08 | 31.62 |
| PGSC0003DMT400075273 | Potato | cytosol, endoplasmic reticulum, plasma membrane, plastid | 30.89 | 25.17 |
| PGSC0003DMT400075274 | Potato | plastid | 30.08 | 23.57 |
| PGSC0003DMT400067619 | Potato | mitochondrion | 33.33 | 22.53 |
| PGSC0003DMT400070631 | Potato | nucleus | 34.15 | 21.76 |
Protein Annotations
| EnsemblPlants:PGSC0003DMT400075948 | EnsemblPlantsGene:PGSC0003DMG400029541 | GO:GO:0005575 | GO:GO:0016020 | GO:GO:0016021 | PANTHER:PTHR33228 |
| PANTHER:PTHR33228:SF5 | PGSC:PGSC0003DMG400029541 | SEG:seg | TMHMM:TMhelix | UniParc:UPI0002967003 | UniProt:M0ZM99 |
| MapMan:35.2 | : | : | : | : | : |
Description
Gene of unknown function [Source:PGSC_GENE;Acc:PGSC0003DMG400029541]
Coordinates
chr8:+:44690845..44691466
Molecular Weight (calculated)
13607.7 Da
IEP (calculated)
8.452
GRAVY (calculated)
-0.074
Length
123 amino acids
Sequence
(BLAST)
(BLAST)
001: MSMSSSMMMM KPSHNATSTL LVDSGITRWN SPVPYLFGGI AIILGLIALA LLVVTCSYKK PSTEESSSRS NNVNDSDRGQ EKKVVELMKP EMEPKFVVIM
101: PGDYNPTWLA KPTLPIRYVP DQV
101: PGDYNPTWLA KPTLPIRYVP DQV
1: MSLHRDSMVP VNSRLENMDS PILSKICAWG VMLGLFALSL FAMAYACYHK QTSNSCIEEK QGKKQVLKPL DMEPKIVVIM AGNENPTFFA KPTQINA
Arabidopsis Description
GDU7GDU7 [Source:UniProtKB/TrEMBL;Acc:A0A178UB13]
SUBAcon: [endoplasmic reticulum,nucleus,plasma membrane]
SUBAcon: [endoplasmic reticulum,nucleus,plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.