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Sorghum
Subcellular Localization
min:
: max

 
Winner_takes_all: plastid

Predictor Summary:
  • plastid 11
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Zm00001d034074_P003 Maize plastid 92.28 92.1
Os03t0758100-01 Rice cytosol, plasma membrane, plastid 80.2 88.37
HORVU5Hr1G096390.5 Barley cytosol, plastid 79.7 85.42
TraesCS5D01G404500.1 Wheat golgi, plastid 81.83 83.26
TraesCS5B01G400000.1 Wheat golgi, plastid 81.62 82.8
TraesCS5A01G395200.1 Wheat plastid 81.12 82.54
GSMUA_Achr4P32600_001 Banana plastid 71.07 75.51
VIT_01s0011g00730.t01 Wine grape plastid 70.46 70.74
Solyc05g012510.2.1 Tomato plastid 68.43 69.7
PGSC0003DMT400072963 Potato cytosol, extracellular, plastid 68.93 69.64
KRG89496 Soybean plastid 66.7 67.18
EES03893 Sorghum cytosol 52.69 61.93
Protein Annotations
KEGG:00500+2.4.1.1MapMan:3.2.3.3.4Gene3D:3.40.50.2000UniProt:A0A1B6QHW4ncoils:CoilGO:GO:0003674
GO:GO:0003824GO:GO:0004645GO:GO:0005488GO:GO:0005575GO:GO:0005622GO:GO:0005623
GO:GO:0005737GO:GO:0005975GO:GO:0006950GO:GO:0008150GO:GO:0008152GO:GO:0008184
GO:GO:0009266GO:GO:0009414GO:GO:0009507GO:GO:0009536GO:GO:0009570GO:GO:0009628
GO:GO:0016740GO:GO:0016757GO:GO:0030170GO:GO:0102250GO:GO:0102499InterPro:Glycg_phsphrylas
InterPro:Glyco_trans_35EnsemblPlants:KXG37513ProteinID:KXG37513ProteinID:KXG37513.1PFAM:PF00343PIRSF:PIRSF000460
ScanProsite:PS00102PANTHER:PTHR11468PANTHER:PTHR11468:SF14MetaCyc:PWY-5941MetaCyc:PWY-6731MetaCyc:PWY-6737
MetaCyc:PWY-7238InterPro:Pyridoxal_P_attach_siteEnsemblPlantsGene:SORBI_3001G083900SUPFAM:SSF53756TIGRFAMs:TIGR02093UniParc:UPI0002207071
SEG:seg:::::
Description
hypothetical protein
Coordinates
chr1:+:6491162..6497719
Molecular Weight (calculated)
109920.0 Da
IEP (calculated)
5.256
GRAVY (calculated)
-0.343
Length
985 amino acids
Sequence
(BLAST)
001: MATTASPPLQ LATASRPHAS ASGGGGVGGV LLAGGCGGGV VPGRGRGRMQ RRVSARSVAS DRDVQGPVSP AEGLPSVLNS IGSSAIASNI KHHAEFTPLF
101: SPEHFSPLKA YHATAKSVLD ALLINWNATY DYYNKMNVKQ AYYLSMEFLQ GRALTNAIGN LEITGEYAEA LKQLGQNLED VASQEPDAAL GNGGLGRLAS
201: CFLDSLATLN YPAWGYGLRY KYGLFKQIIT KDGQEEIAEN WLEMGYPWEV VRNDVSYPVK FYGKVVEGTD GRKHWIGGEN IKAVAHDVPI PGYKTRTTNN
301: LRLWSTTVPA QDFDLAAFNS GDHTKAYEAH LNAEKICHIL YPGDESLEGK VLRLKQQYTL CSASLQDIIG RFESRAGESL NWEDFPSKVA VQMNDTHPTL
401: CIPELMRILI DVKGLSWSEA WSITERTVAY TNHTVLPEAL EKWSLDIMQK LLPRHVEIIE TIDEELINDI VSKYGTTDTG LLKKKLKEMR ILDNVDLPAS
501: ISQLFVKPKD KKESPAKSKQ KLLVKSLETI AEDEEKTELE EEEAEVLSEI EEEKLEPEEV EAEEEGSEDE LDPFVKSDPK LPRVVRMANL CVVGGHSVNG
601: VAEIHSEIVK QDVFNSFYEM WPTKFQNKTN GVTPRRWIRF CNPELSALIS KWIGSDDWVL NTDKLAELKK FADNEDLHSE WRAAKRANKM KVVSLIREKT
701: GYIVSPDAMF DVQVKRIHEY KRQLLNILGI VYRYKKMKEM SAEERAKSFV PRVCIFGGKA FATYIQAKRI VKFITDVAAT VNHDSDVGDL LKVVFVPDYN
801: VSVAEALIPA SELSQHISTA GMEASGTSNM KFAMNGCILI GTLDGANVEI REEVGEENFF LFGAEAHEIA GLRKERAEGK FVPDPRFEEV KEFVRSGVFG
901: TYNYDELMGS LEGNEGYGRA DYFLVGKDFP SYIECQEKVD KAYRDQKLWT RMSILNTAGS SKFSSDRTIH EYAKDIWDIS PVILP
Best Arabidopsis Sequence Match ( AT3G29320.1 )
(BLAST)
001: MDTMRISGVS TGAEVLIQCN SLSSLVSRRC DDGKWRTRMF PARNRDLRPS PTRRSFLSVK SISSEPKAKV TDAVLDSEQE VFISSMNPFA PDAASVASSI
101: KYHAEFTPLF SPEKFELPKA FFATAQSVRD ALIMNWNATY EYYNRVNVKQ AYYLSMEFLQ GRALSNAVGN LGLNSAYGDA LKRLGFDLES VASQEPDPAL
201: GNGGLGRLAS CFLDSMATLN YPAWGYGLRY KYGLFKQRIT KDGQEEAAED WLELSNPWEI VRNDVSYPIK FYGKVVFGSD GKKRWIGGED IVAVAYDVPI
301: PGYKTKTTIN LRLWSTKAPS EDFDLSSYNS GKHTEAAEAL FNAEKICFVL YPGDESTEGK ALRLKQQYTL CSASLQDIVA RFETRSGGNV NWEEFPEKVA
401: VQMNDTHPTL CIPELMRILM DLKGLSWEDA WKITQRTVAY TNHTVLPEAL EKWSLELMEK LLPRHVEIIE KIDEELVRTI VSEYGTADPD LLEEKLKAMR
501: ILENVELPSA FADVIVKPVN KPVTAKDAQN GVKTEQEEEK TAGEEEEDEV IPEPTVEPPK MVRMANLAVV GGHAVNGVAE IHSEIVKQDV FNDFVQLWPE
601: KFQNKTNGVT PRRWIRFCNP YLSDIITNWI GTEDWVLNTE KVAELRKFAD NEDLQSEWRA AKKKNKLKVV SLIKERTGYT VSPDAMFDIQ IKRIHEYKRQ
701: LLNILGIVYR YKKMKEMSAS EREKAFVPRV CIFGGKAFAT YVQAKRIVKF ITDVASTINH DPEIGDLLKV IFVPDYNVSV AELLIPASEL SQHISTAGME
801: ASGTSNMKFS MNGCVLIGTL DGANVEIREE VGEENFFLFG AKADQIVNLR KERAEGKFVP DPTFEEVKKF VGSGVFGSNS YDELIGSLEG NEGFGRADYF
901: LVGKDFPSYI ECQEKVDEAY RDQKRWTRMS IMNTAGSFKF SSDRTIHEYA KDIWNIKQVE LP
Arabidopsis Description
PHS1Alpha-glucan phosphorylase 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9LIB2]
SUBAcon: [plastid]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.