Skip to main content
crop-pal logo
Wheat
Subcellular Localization
min:
: max

 
Winner_takes_all: golgi, plastid

Predictor Summary:
  • plastid 8
Predictors GFP MS/MS Papers
Winner Takes All:golgi, plastid
Any Predictor:plastid
ChloroP:plastid
iPSORT:plastid
MultiLoc:plastid
Predotar:plastid
PProwler:plastid
TargetP:plastid
WoLF PSORT:plastid
YLoc:plastid
golgi: 25769308
msms PMID: 25769308 doi
AL Chateigner-Boutin, M Suliman, B Bouchet, C Alvarado, V Lollier, H Rogniaux, F Guillon, C Larré
INRA, UR1268 Biopolymères, Interactions Assemblages, F-44316 Nantes, France colette.larre@nantes.inra.fr., INRA, UR1268 Biopolymères, Interactions Assemblages, F-44316 Nantes, France.
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS5D01G404500.1 Wheat golgi, plastid 97.22 97.52
HORVU5Hr1G096390.5 Barley cytosol, plastid 91.45 96.63
TraesCS5A01G395200.1 Wheat plastid 95.98 96.28
Os03t0758100-01 Rice cytosol, plasma membrane, plastid 78.17 84.9
KXG37513 Sorghum plastid 82.8 81.62
Zm00001d034074_P003 Maize plastid 81.57 80.24
GSMUA_Achr4P32600_001 Banana plastid 71.99 75.4
VIT_01s0011g00730.t01 Wine grape plastid 70.85 70.13
Solyc05g012510.2.1 Tomato plastid 68.69 68.98
PGSC0003DMT400072963 Potato cytosol, extracellular, plastid 69.21 68.92
KRG89496 Soybean plastid 67.35 66.87
TraesCS3B01G398000.1 Wheat cytosol, golgi 55.1 64.3
TraesCS3B01G397900.1 Wheat cytosol 54.89 64.06
Protein Annotations
KEGG:00500+2.4.1.1MapMan:3.2.3.3.4Gene3D:3.40.50.2000GO:GO:0003674GO:GO:0003824GO:GO:0004645
GO:GO:0005488GO:GO:0005975GO:GO:0008150GO:GO:0008152GO:GO:0008184GO:GO:0016740
GO:GO:0030170InterPro:Glycg_phsphrylasInterPro:Glyco_trans_35PFAM:PF00343PIRSF:PIRSF000460ScanProsite:PS00102
PANTHER:PTHR11468PANTHER:PTHR11468:SF14InterPro:Pyridoxal_P_attach_siteSUPFAM:SSF53756TIGRFAMs:TIGR02093EnsemblPlantsGene:TraesCS5B01G400000
EnsemblPlants:TraesCS5B01G400000.1TIGR:cd04300SEG:seg:::
Description
No Description!
Coordinates
chr5B:-:577302349..577309390
Molecular Weight (calculated)
108281.0 Da
IEP (calculated)
5.710
GRAVY (calculated)
-0.362
Length
971 amino acids
Sequence
(BLAST)
001: MATASPPLAT AFRPLAAAGG AGGGGAHAVG AAGRVAPRRG RRGFVVRSVA SDREVRGPAS TEEELSAVLT SIDSSAIASN IQHHADFTPL FSPEHSSPLK
101: AYHATAKSVF DSLIINWNAT YDYYNKVNAK QAYYLSMEFL QGRALTNAIG NLELTGQYAE ALKQLGQNLE DVASQEPDPA LGNGGLGRLA SCFLDSMATL
201: NYPAWGYGLR YRYGLFKQII AKDGQEEVAE NWLEMGNPWE IVRNDVSYPV KFYGKVVEGT DGRKHWIGGE NIKAVAHDVP IPGYKTKTTN NLRLWSTTVP
301: SQNFDLGAFN AGDHAKANEA HLNAEKICHV LYPGDESSEG KILRLKQQYT LCSASLQDII SRFESRAGDS LNWEDFPSKV AVQMNDTHPT LCIPELMRIL
401: MDIKGLSWNE AWSITERTVA YTNHTVLPEA LEKWSLDIMQ KLLPRHVEII ETIDEKLMNN IVSKYGTADI SLLKQKLKDM RILDNVDLPA SVAKLFIKPK
501: EKTGKLLVQS LESIAEGDEK TESQEEENIL SETAEKKGGS DSEEAPDAEK EDPVYELDPF AKYDPQLPRV VRMANLCVVG GHSVNGVAEI HSEIVKQDVF
601: NSFYEMWPTK FQNKTNGVTP RRWIRFCNPE LSAIISKWIG SDDWILNTDK LAGLKKFADD EDLQSEWRTA KRNNKMKVVS LIRDKTGYVV SPDAMFDVQV
701: KRIHEYKRQL LNILGIVYRY KKMKEMSAKD RIKSFVPRVC IFGGKAFATY VQAKRIVKFI TDVAATVNYD PDVGDLLKVV FVPDYNVSVA EKLIPASELS
801: QHISTAGMEA SGTSNMKFAM NGCILIGTLD GANVEIREEV GEENFFLFGA HAPEIAGLRQ ERAEGKFVPD PRFEEVKEYV RSGVFGTSNY DELMGSLEGN
901: EGYGRADYFL VGKDFPSYIE CQQKVDEAYR DQKLWTRMSI LNTAGSPKFS SDRTIHEYAK DIWDISPVIM P
Best Arabidopsis Sequence Match ( AT3G29320.1 )
(BLAST)
001: MDTMRISGVS TGAEVLIQCN SLSSLVSRRC DDGKWRTRMF PARNRDLRPS PTRRSFLSVK SISSEPKAKV TDAVLDSEQE VFISSMNPFA PDAASVASSI
101: KYHAEFTPLF SPEKFELPKA FFATAQSVRD ALIMNWNATY EYYNRVNVKQ AYYLSMEFLQ GRALSNAVGN LGLNSAYGDA LKRLGFDLES VASQEPDPAL
201: GNGGLGRLAS CFLDSMATLN YPAWGYGLRY KYGLFKQRIT KDGQEEAAED WLELSNPWEI VRNDVSYPIK FYGKVVFGSD GKKRWIGGED IVAVAYDVPI
301: PGYKTKTTIN LRLWSTKAPS EDFDLSSYNS GKHTEAAEAL FNAEKICFVL YPGDESTEGK ALRLKQQYTL CSASLQDIVA RFETRSGGNV NWEEFPEKVA
401: VQMNDTHPTL CIPELMRILM DLKGLSWEDA WKITQRTVAY TNHTVLPEAL EKWSLELMEK LLPRHVEIIE KIDEELVRTI VSEYGTADPD LLEEKLKAMR
501: ILENVELPSA FADVIVKPVN KPVTAKDAQN GVKTEQEEEK TAGEEEEDEV IPEPTVEPPK MVRMANLAVV GGHAVNGVAE IHSEIVKQDV FNDFVQLWPE
601: KFQNKTNGVT PRRWIRFCNP YLSDIITNWI GTEDWVLNTE KVAELRKFAD NEDLQSEWRA AKKKNKLKVV SLIKERTGYT VSPDAMFDIQ IKRIHEYKRQ
701: LLNILGIVYR YKKMKEMSAS EREKAFVPRV CIFGGKAFAT YVQAKRIVKF ITDVASTINH DPEIGDLLKV IFVPDYNVSV AELLIPASEL SQHISTAGME
801: ASGTSNMKFS MNGCVLIGTL DGANVEIREE VGEENFFLFG AKADQIVNLR KERAEGKFVP DPTFEEVKKF VGSGVFGSNS YDELIGSLEG NEGFGRADYF
901: LVGKDFPSYI ECQEKVDEAY RDQKRWTRMS IMNTAGSFKF SSDRTIHEYA KDIWNIKQVE LP
Arabidopsis Description
PHS1Alpha-glucan phosphorylase 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9LIB2]
SUBAcon: [plastid]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.